Jatropha Genome Database

JcCB0429731.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0429731.10 - phase: 0 
         (123 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29610.m000408 conserved hypothetical protein                          177   9e-46
29794.m003401 hypothetical protein                                     67   3e-12
29794.m003402 Lachrymatory-factor synthase precursor, putative         55   8e-09
29912.m005455 Lachrymatory-factor synthase precursor, putative         53   4e-08

>29610.m000408 conserved hypothetical protein
          Length = 111

 Score =  177 bits (450), Expect = 9e-46,   Method: Compositional matrix adjust.
 Identities = 87/121 (71%), Positives = 99/121 (81%), Gaps = 16/121 (13%)

Query: 3   MVERCTDLVGDEGVPGYVRLVSGFMFPQEDGERSWIKERLVCMDLTSYNYVYKMEASNVG 62
           MVERCTDL GDEG+PGYVRLVSGFMFPQ+DGE                +YVYKMEAS+VG
Sbjct: 1   MVERCTDLAGDEGIPGYVRLVSGFMFPQQDGE----------------SYVYKMEASDVG 44

Query: 63  LDGSVNTLKLVDYGDDSTLVNWSFQIDPLEGASEDNIMDYLGFLYKSCINRIEAAIKAAS 122
           LDGSVNTLKLVDYGDDSTL+NW F+I+PL+GASEDNI+DYLGFLYKSCINR + A++A  
Sbjct: 45  LDGSVNTLKLVDYGDDSTLINWFFEINPLQGASEDNIIDYLGFLYKSCINRKQGALEAVI 104

Query: 123 K 123
           K
Sbjct: 105 K 105


>29794.m003401 hypothetical protein
          Length = 343

 Score = 66.6 bits (161), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 36/108 (33%), Positives = 57/108 (52%), Gaps = 8/108 (7%)

Query: 1   MPMVERCTDLVGDEGVPGYVRLVSGFMFPQE-------DGERSWIKERLVCMDLTSYNYV 53
           +P +  C  + G  G  G VR  +GF  P E       +   SW KERLV +D       
Sbjct: 43  LPTLRTCYGICGTNGERGCVRYCAGFSIPPEVTDKSHLNHNSSWSKERLVAVDHVERCLT 102

Query: 54  YKMEASNVGLDGSVNTLKLVDYG-DDSTLVNWSFQIDPLEGASEDNIM 100
           Y++  SN+G    V+T+K+V  G  +  ++ WSFQ+DP++G   D+++
Sbjct: 103 YEIVDSNIGFKSYVSTVKIVPAGVGNGCVIEWSFQVDPVKGYVLDDLI 150



 Score = 55.1 bits (131), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 35/129 (27%), Positives = 59/129 (45%), Gaps = 7/129 (5%)

Query: 1   MPMVERCTDLVGDEGVPGYVRLVSGFMFPQEDGER----SWIKERLVCMDLTSYNYVYKM 56
            P ++ C  + G  G PG VR  +    P  DG      SW+KE+LV ++       Y++
Sbjct: 214 FPNLDTCYQVEGQLGQPGLVRYCASVPQPSSDGSGETTFSWVKEKLVMINPDERCLSYEV 273

Query: 57  EASNVGLDGSVNTLKLVDYGDDSTL---VNWSFQIDPLEGASEDNIMDYLGFLYKSCINR 113
             S++G +    T +L+    D+     + WSF  DP+E  S  + + Y     +    +
Sbjct: 274 VDSSMGFESYAATFRLLQVNGDAQHGCKIEWSFVSDPVEAWSFQDFVTYANSCLQFMAKK 333

Query: 114 IEAAIKAAS 122
           IE A+ + S
Sbjct: 334 IEDAVSSVS 342


>29794.m003402 Lachrymatory-factor synthase precursor, putative
          Length = 182

 Score = 55.1 bits (131), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 34/136 (25%), Positives = 61/136 (44%), Gaps = 13/136 (9%)

Query: 1   MPMVERCTDLVGDEGVPGYVRLVSGFMFPQEDGER----------SWIKERLVCMDLTSY 50
            P +  C  + G  G  G +R   GF  P +  E+          SW KE+L+ ++    
Sbjct: 39  FPSIPTCYGIHGTNGELGCIRYCGGFSIPSDPTEQHQNDSNLPVVSWSKEKLIAIEHAER 98

Query: 51  NYVYKMEASNVGLDGSVNTLKLVDYGDDS---TLVNWSFQIDPLEGASEDNIMDYLGFLY 107
              Y++  SN+G    V  +K+V   ++     ++ WSF ++P+EG   D+I+       
Sbjct: 99  CLSYEIIDSNIGYKSYVAVVKIVPAKEEEGGGCVIEWSFTVNPVEGCVFDDIVSTWDMAI 158

Query: 108 KSCINRIEAAIKAASK 123
           +   +R+E   K  S+
Sbjct: 159 QIVADRMEDEAKKVSE 174


>29912.m005455 Lachrymatory-factor synthase precursor, putative
          Length = 155

 Score = 52.8 bits (125), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 27/99 (27%), Positives = 51/99 (51%), Gaps = 8/99 (8%)

Query: 1   MPMVERCTDLVGDEGVPGYVRLVSGFMFPQEDGER-------SWIKERLVCMDLTSYNYV 53
            P +  C  + G  G PG VR  +GF  P ++  R       +W K++L+ +D     + 
Sbjct: 39  FPTLTTCVPVEGISGQPGCVRYCAGFRTPVDNTNRRADQEVSNWTKQKLLSIDSKEMVFS 98

Query: 54  YKMEASNVGLDGSVNTLKLVDYGDDSTLVNWSFQIDPLE 92
           Y +   NVG +  V+T+K+V   +D   + W ++++P++
Sbjct: 99  YSIIDGNVGFNAYVSTVKVVP-NEDGCEIEWRYEVEPVK 136