Jatropha Genome Database
- JcCB0428641.10
BLASTP 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= JcCB0428641.10 - phase: 1 /partial
(269 letters)
Database: castor_wgs_0.1_aa
31,221 sequences; 10,419,776 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
29866.m000621 conserved hypothetical protein 300 5e-82
30076.m004450 sensory transduction histidine kinase, putative 136 8e-33
29758.m000642 Two-component response regulator ARR2, putative 92 2e-19
30130.m000280 sensory transduction histidine kinase, putative 92 2e-19
29805.m001503 sensory transduction histidine kinase, putative 83 2e-16
30138.m004044 sensory transduction histidine kinase, putative 77 1e-14
27506.m000051 zinc finger protein, putative 59 3e-09
29848.m004493 Salt-tolerance protein, putative 58 4e-09
27524.m000294 conserved hypothetical protein 54 8e-08
29496.m000135 zinc finger protein, putative 53 1e-07
29838.m001723 hypothetical protein 52 4e-07
29647.m002019 hypothetical protein 52 4e-07
28207.m000104 transcription factor, putative 51 5e-07
29596.m000719 GATA transcription factor, putative 50 1e-06
30128.m009041 hypothetical protein 50 1e-06
30199.m000884 hypothetical protein 49 3e-06
>29866.m000621 conserved hypothetical protein
Length = 667
Score = 300 bits (768), Expect = 5e-82, Method: Compositional matrix adjust.
Identities = 163/262 (62%), Positives = 186/262 (70%), Gaps = 7/262 (2%)
Query: 9 KPSSTFSVYNTDNPGPSPNTERSNASIANIKTKEYEIVIPCSQQRVFPLHIPVNGMSFNN 68
K SS YN+D PGP P+T R+ S+AN +T+E E I +QQ+VFP VNG+ FNN
Sbjct: 412 KFSSNVGGYNSDVPGPPPSTARAIISLANGQTEESEKAISSTQQKVFP----VNGVGFNN 467
Query: 69 LCTNYGSVFPPIFCKQXXXXXXXXXXXXXXXXXXX-KVNAFPQSTLRSNSDQLYDCLGQT 127
LCT+YGS+F PIFCKQ KVN F Q SNS+ LYD L QT
Sbjct: 468 LCTSYGSMFSPIFCKQQSGASPIPSPSSGSQPEPNCKVNPFRQFNFISNSENLYDGLIQT 527
Query: 128 AKDSTSPSLQKQDHKLDSLEDRGHISAATDHSATSSFCNVSATHLNMGYGSTSGSNSNVD 187
A D+ + +LQKQD +LD EDRGHIS TD SATSSF N +A+HLNMGYGS SGSNSNVD
Sbjct: 528 ANDTANRTLQKQDKELDPPEDRGHISPTTDQSATSSFYNGAASHLNMGYGSHSGSNSNVD 587
Query: 188 QAAIIRTTSERKNEGGILHNDANSHRAIQREAALTKFRLKRKDRCYEKKVRYESRKKLAE 247
Q A +R +ERKNE LHN ANSHR+IQREAAL KFRLKRKDRCYEKKVRYESRKKLAE
Sbjct: 588 QVANVRVAAERKNEESTLHN-ANSHRSIQREAALNKFRLKRKDRCYEKKVRYESRKKLAE 646
Query: 248 QRPRVKGQFVRQVQLPISETEQ 269
QRPRVKGQFVRQ P +ET+Q
Sbjct: 647 QRPRVKGQFVRQAH-PSAETDQ 667
>30076.m004450 sensory transduction histidine kinase, putative
Length = 697
Score = 136 bits (343), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 97/231 (41%), Positives = 125/231 (54%), Gaps = 23/231 (9%)
Query: 44 EIVIPCSQQRVFPLHIPVNGMSFNNLCTNYGSVFPPIFCKQXXXXXXXXXXXXXXXXXXX 103
E+ P SQ+ I V+G+ N+C YG VF P++ Q
Sbjct: 465 ELAYPDSQKL-----IAVSGLRLENICNGYGHVFSPLYYAQTGLPSSSPKLASQREQ--- 516
Query: 104 KVNAFPQSTLRSNSDQLYDCLG---QTAKDSTSPSLQK--QDHKLDSLEDRGHISAATDH 158
+ FP ST ++ ++ D G Q+A+ +T+P Q Q + ++ E+ H S A
Sbjct: 517 --SPFPISTSIHSNPEIQDSEGNNRQSAETATAPVEQNMHQQNNMEHPEELKHGSPAAGQ 574
Query: 159 SATSSFCNVSATHLNM-GYGS-TSGSNSNVDQAAIIR--TTSERKNEGGILHNDA----N 210
S SS CN A H N YGS +S ++ N A T E N+GGI+ D +
Sbjct: 575 STGSSMCNSFADHNNSSAYGSFSSRTHRNATFVAPTEKPTVPESSNDGGIVACDGFRGMD 634
Query: 211 SHRAIQREAALTKFRLKRKDRCYEKKVRYESRKKLAEQRPRVKGQFVRQVQ 261
S R QREAALTKFRLKRKDRCYEKKVRY+SRK+LAE RPRVKGQFVRQVQ
Sbjct: 635 SDRFSQREAALTKFRLKRKDRCYEKKVRYQSRKRLAELRPRVKGQFVRQVQ 685
>29758.m000642 Two-component response regulator ARR2, putative
Length = 659
Score = 92.4 bits (228), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 53/108 (49%), Positives = 68/108 (62%), Gaps = 10/108 (9%)
Query: 153 SAATDHSATSSFCNVSATHLNMGYGSTSGSNSNVDQAAIIRTTSERKNEGGILHNDANSH 212
++ +DH S+ N S+ LN+ + N ++A T R + HN
Sbjct: 551 ASGSDHG--SNGLNESSVALNLKKTNAERDNGAAEKAGAACGTGSRT---AVDHN----- 600
Query: 213 RAIQREAALTKFRLKRKDRCYEKKVRYESRKKLAEQRPRVKGQFVRQV 260
R+ QREAAL KFR KRK+RC+EKKVRY+SRKKLAEQRPRV+GQFVRQV
Sbjct: 601 RSAQREAALNKFRQKRKERCFEKKVRYQSRKKLAEQRPRVRGQFVRQV 648
>30130.m000280 sensory transduction histidine kinase, putative
Length = 807
Score = 92.0 bits (227), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 57/128 (44%), Positives = 72/128 (56%), Gaps = 14/128 (10%)
Query: 152 ISAATDHSATSSFCNVSATHLNMGYGSTSGSNSNVDQAAIIRTTSERKNEGGILH----- 206
I T+ +A + N SA+ N G +GSN+ + T E N G H
Sbjct: 635 IGGPTEGNAGNYSMNGSASGSNHGSNGQNGSNTALHTEL---TNIESNNTAGANHGAGGM 691
Query: 207 ------NDANSHRAIQREAALTKFRLKRKDRCYEKKVRYESRKKLAEQRPRVKGQFVRQV 260
N + R QREAAL+KFR KRK+RC+EK+VRY+SRK+LAEQRPRVKGQFVRQ
Sbjct: 692 SGRISGNAVDEDRLAQREAALSKFRQKRKERCFEKRVRYQSRKRLAEQRPRVKGQFVRQT 751
Query: 261 QLPISETE 268
+E E
Sbjct: 752 TYDRAEWE 759
>29805.m001503 sensory transduction histidine kinase, putative
Length = 762
Score = 82.8 bits (203), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 37/53 (69%), Positives = 45/53 (84%)
Query: 207 NDANSHRAIQREAALTKFRLKRKDRCYEKKVRYESRKKLAEQRPRVKGQFVRQ 259
N + ++ QRE ALTKFR KRK+RC+ KKVRY+SRK+LAEQRPRV+GQFVRQ
Sbjct: 698 NRGDQNKFSQREVALTKFRQKRKERCFRKKVRYQSRKRLAEQRPRVRGQFVRQ 750
>30138.m004044 sensory transduction histidine kinase, putative
Length = 550
Score = 76.6 bits (187), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 35/59 (59%), Positives = 46/59 (77%)
Query: 202 GGILHNDANSHRAIQREAALTKFRLKRKDRCYEKKVRYESRKKLAEQRPRVKGQFVRQV 260
GG D + +REAAL KFR KRK+RC++KK+RY +RKKLAE+RPRV+GQFVR++
Sbjct: 452 GGSSSPDVKIKKLDRREAALMKFRQKRKERCFDKKIRYVNRKKLAERRPRVRGQFVRKL 510
>27506.m000051 zinc finger protein, putative
Length = 388
Score = 58.5 bits (140), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 26/56 (46%), Positives = 38/56 (67%)
Query: 207 NDANSHRAIQREAALTKFRLKRKDRCYEKKVRYESRKKLAEQRPRVKGQFVRQVQL 262
N A I REA + ++R KRK+R +EK +RY SRK AE RPR+KG+F ++ ++
Sbjct: 305 NQAAQMCGINREARVLRYREKRKNRKFEKTIRYASRKAYAETRPRIKGRFAKRTEI 360
>29848.m004493 Salt-tolerance protein, putative
Length = 332
Score = 58.2 bits (139), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 24/51 (47%), Positives = 37/51 (72%)
Query: 214 AIQREAALTKFRLKRKDRCYEKKVRYESRKKLAEQRPRVKGQFVRQVQLPI 264
A+ REA + ++R KRK+R +EK +RY SRK AE RPR+KG+F ++ + +
Sbjct: 265 AVDREARVLRYREKRKNRKFEKTIRYASRKAYAETRPRIKGRFAKRTDIDV 315
>27524.m000294 conserved hypothetical protein
Length = 468
Score = 53.9 bits (128), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 23/46 (50%), Positives = 35/46 (76%)
Query: 217 REAALTKFRLKRKDRCYEKKVRYESRKKLAEQRPRVKGQFVRQVQL 262
REA ++++R KR+ R + KK+RYE RK AE+RPR+KG+FV++
Sbjct: 411 REARVSRYREKRRTRLFSKKIRYEVRKLNAEKRPRMKGRFVKRATF 456
>29496.m000135 zinc finger protein, putative
Length = 378
Score = 53.1 bits (126), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 24/53 (45%), Positives = 37/53 (69%), Gaps = 1/53 (1%)
Query: 217 REAALTKFRLKRKDRCYEKKVRYESRKKLAEQRPRVKGQFVRQVQLPISETEQ 269
REA + ++R K+K R +EK +RY SRK AE RPR+KG+F ++ + + E +Q
Sbjct: 309 REARVLRYREKKKTRKFEKTIRYASRKAYAETRPRIKGRFAKRTDVEV-EVDQ 360
>29838.m001723 hypothetical protein
Length = 313
Score = 51.6 bits (122), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 22/42 (52%), Positives = 32/42 (76%)
Query: 216 QREAALTKFRLKRKDRCYEKKVRYESRKKLAEQRPRVKGQFV 257
+R A+L +FR KRK+RC+EKK+RY RK++A++ R GQF
Sbjct: 76 RRIASLVRFREKRKERCFEKKIRYTCRKEVAQRMHRKNGQFA 117
>29647.m002019 hypothetical protein
Length = 411
Score = 51.6 bits (122), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 23/55 (41%), Positives = 40/55 (72%), Gaps = 3/55 (5%)
Query: 204 ILHNDANSHRAIQREAALTKFRLKRKDRCYEKKVRYESRKKLAEQRPRVKGQFVR 258
++ +D NS +R++A+++++ KRK R Y+K +RYESRK AE R R++G+F +
Sbjct: 357 VVSHDINSQ---ERDSAISRYKEKRKTRRYDKHIRYESRKARAESRTRIRGRFAK 408
>28207.m000104 transcription factor, putative
Length = 430
Score = 51.2 bits (121), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 22/46 (47%), Positives = 34/46 (73%)
Query: 217 REAALTKFRLKRKDRCYEKKVRYESRKKLAEQRPRVKGQFVRQVQL 262
REA + +++ KR+ R + KK+RYE RK AE+RPR+KG+FV++
Sbjct: 375 REARVLRYKEKRRTRLFSKKIRYEVRKLNAEKRPRMKGRFVKRTSF 420
>29596.m000719 GATA transcription factor, putative
Length = 327
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 21/41 (51%), Positives = 32/41 (78%)
Query: 216 QREAALTKFRLKRKDRCYEKKVRYESRKKLAEQRPRVKGQF 256
+R A+L +FR KRK+RC++KK+RY RK++A++ R GQF
Sbjct: 130 RRIASLVRFREKRKERCFDKKIRYTVRKEVAQRMHRKNGQF 170
>30128.m009041 hypothetical protein
Length = 477
Score = 49.7 bits (117), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 24/50 (48%), Positives = 33/50 (66%)
Query: 214 AIQREAALTKFRLKRKDRCYEKKVRYESRKKLAEQRPRVKGQFVRQVQLP 263
A R A+ ++ KRK+R Y+K +RYESRK A+ R RVKG+FV+ P
Sbjct: 426 AKNRGIAMQHYKEKRKNRRYDKHIRYESRKARADTRKRVKGRFVKASDAP 475
>30199.m000884 hypothetical protein
Length = 58
Score = 48.9 bits (115), Expect = 3e-06, Method: Composition-based stats.
Identities = 20/45 (44%), Positives = 37/45 (82%)
Query: 215 IQREAALTKFRLKRKDRCYEKKVRYESRKKLAEQRPRVKGQFVRQ 259
I+REA++ +++ KR+ R + KK+RY+ RK A++RPR+KG+F+++
Sbjct: 12 IRREASVLRYKEKRQTRLFSKKIRYQVRKLNADKRPRLKGRFIKR 56