Jatropha Genome Database

JcCB0428411.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0428411.10 + phase: 0 /partial
         (355 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29841.m002903 glycerol kinase, putative                               562   e-161

>29841.m002903 glycerol kinase, putative
          Length = 521

 Score =  562 bits (1448), Expect = e-161,   Method: Compositional matrix adjust.
 Identities = 271/326 (83%), Positives = 294/326 (90%), Gaps = 2/326 (0%)

Query: 29  NFLRKLEKELPGGRTHFVETSGLPISTYFSAMKILWLMENVDAVKLATKTGDALFGTVDT 88
           +  RKLEKELPGGRTHF+ET GLP+STYFSA+KILWLMENVDAVK A K GDALFGT+D+
Sbjct: 117 SICRKLEKELPGGRTHFIETCGLPLSTYFSAVKILWLMENVDAVKEAIKKGDALFGTIDS 176

Query: 89  WLIWNLTGGVSGGLHVTDVSNASRTMLMNIKTLDWDKTTLQTLGIPAGILPKIVSNSEII 148
           WLIWNLTGGV GGLHVTDVSNASRTMLMNIKTL+WDK TL TLGIPA ILPKI+SNSE+I
Sbjct: 177 WLIWNLTGGVKGGLHVTDVSNASRTMLMNIKTLEWDKPTLNTLGIPAEILPKIISNSEVI 236

Query: 149 GNVGKGWPVLGVPIAGCLGDQHAAMVGQGCRKGEAKSTYGTGAFILLNTGEKIVKSNHGL 208
           G + KGWPV G+PIAGCLGDQHAAMVGQGC++ EAKSTYGTGAFILLNTG+ IV S HGL
Sbjct: 237 GKIAKGWPVTGIPIAGCLGDQHAAMVGQGCKRDEAKSTYGTGAFILLNTGDHIVPSKHGL 296

Query: 209 LTTLAFKLGPKAPTNYALEGSIAIAGAAVQWLRDGLGIINVASESEVLAKQVDSSGGVYF 268
           LTTLA+KLGPKAPTNYALEGSIAIAGAAVQWLRDGL +I+ ASE E LAKQVDS+GGVYF
Sbjct: 297 LTTLAYKLGPKAPTNYALEGSIAIAGAAVQWLRDGLELISSASEIEELAKQVDSTGGVYF 356

Query: 269 VPAFNGLFAPHWRDDARGVCVGITRFTTKAHIARAVLESMCFQVKDVLDSMQKDTGEKGE 328
           VPAFNGLFAP WRDDARGVC+GITR+T K+HIARAVLESMCFQVKDVLDSM KD  EK  
Sbjct: 357 VPAFNGLFAPWWRDDARGVCIGITRYTNKSHIARAVLESMCFQVKDVLDSMHKDREEK-- 414

Query: 329 QNNAKGEFLLRVDGGATVNNLLMQIQ 354
             + K EFLLRVDGGAT+NNLLMQIQ
Sbjct: 415 HKDTKREFLLRVDGGATINNLLMQIQ 440