Jatropha Genome Database

JcCB0426941.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0426941.10 + phase: 0 
         (452 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29700.m000765 conserved hypothetical protein                          557   e-159

>29700.m000765 conserved hypothetical protein
          Length = 645

 Score =  557 bits (1435), Expect = e-159,   Method: Compositional matrix adjust.
 Identities = 291/417 (69%), Positives = 332/417 (79%), Gaps = 11/417 (2%)

Query: 1   MAKDQSISVKDTVHKLQLSLLEGIKNEDQLFTAGSLMSRSDYEDVVTERSIANLCGYPLC 60
           MAK++S+SVKDTV+KLQLSLLEGI+NEDQL  AGSLMSRSDYEDVV ERSI+NLCGYPLC
Sbjct: 1   MAKEESVSVKDTVYKLQLSLLEGIENEDQLLAAGSLMSRSDYEDVVVERSISNLCGYPLC 60

Query: 61  NNSLPLDRPYKGRYRISLKEHKVYDLHETYMYCSSSCIVNSRAFAGSLQEERCSVLNPMK 120
           NNSLP DRPYKGRYRISLKEH+VYDL ETYMYCSSSC+VNSRAF+ SLQE+RCSVLNP+K
Sbjct: 61  NNSLPSDRPYKGRYRISLKEHRVYDLQETYMYCSSSCLVNSRAFSESLQEKRCSVLNPIK 120

Query: 121 LDEILRMFNNLSLDSKNLVENGDLGLSNLKIQEKIESNVGEVSLEEWIGPSNAIEGYVPQ 180
           L+EILR FN+L+LDS+ L  +GDLGLSNLKIQEK E+NVG+VSLEEWIGPSNAIEGYVPQ
Sbjct: 121 LNEILRKFNDLTLDSEGLGRSGDLGLSNLKIQEKSETNVGKVSLEEWIGPSNAIEGYVPQ 180

Query: 181 RDRDFKGSSFKNPKEASKAISTKPVNKQECFFNDMDFMSTIITKDEYSISKAPSGSISTG 240
            DRD    S KN KE  KAI  KPV+KQ+CFF+D DF STIIT DEYSISK PSG  ST 
Sbjct: 181 GDRD-PNPSLKNHKEGLKAICKKPVSKQDCFFSDTDFTSTIITNDEYSISKGPSGLTSTA 239

Query: 241 SDMKLQEQRGKETHKGSEAQSSSPGKHAFVKTXXXXXXXXXXQIIKEELSDKDLLSASNY 300
           SD+KLQ Q GK  H+G  AQ SS  K   +K           ++IKE+L+ +DL S+S Y
Sbjct: 240 SDIKLQAQTGK-GHEGLNAQLSSLRKQDSIKASRKSKGRRKEKVIKEQLNFQDLPSSSYY 298

Query: 301 SQTGSSMNNAEPEEKSGAKQAANLSESMLKPSLKPSGAKKSVHSVTWADEKFDNAKSRNL 360
           +        AE E+ S A  AANL+ES+LKPSLK SGAK+S  SVTWADE+ DNA SRNL
Sbjct: 299 T--------AEAEDISQATGAANLNESVLKPSLKSSGAKRSNRSVTWADERVDNAGSRNL 350

Query: 361 CEVREMEDTKSGLEILDSLENNND-NMLRFESAEACAIALSQAAEAVASGDADVNDA 416
           CEV+EME T    EI +S    +D +MLRFESAEACA+ALSQAAEAVASGDADVN A
Sbjct: 351 CEVQEMEQTNESHEISESANKGDDGHMLRFESAEACAVALSQAAEAVASGDADVNKA 407