Jatropha Genome Database

JcCB0425721.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0425721.10 - phase: 0 /pseudo/partial
         (445 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29912.m005368 Regulatory protein NPR1, putative                       699   0.0  
29975.m000753 Regulatory protein NPR1, putative                       333   8e-92
29941.m000229 aberrant large forked product, putative                 159   3e-39

>29912.m005368 Regulatory protein NPR1, putative
          Length = 589

 Score =  699 bits (1804), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 355/436 (81%), Positives = 380/436 (87%), Gaps = 4/436 (0%)

Query: 1   MDNRIGFSDSNEISNGSSTCCIETLSTPNPPNP--EISALQQLSKSLESIXXXXXXXXXX 58
           MD RIGFSDSNEISNGSS+CCIETLS PNPP P  EISALQQLS+SLESI          
Sbjct: 1   MDYRIGFSDSNEISNGSSSCCIETLSNPNPPIPNPEISALQQLSRSLESIIESLDFDFYA 60

Query: 59  XXKITISASNREVPVHRCILSARSPFFKAVFSGSAAKEKGQ-NFEVKELAKDYDIGFDSI 117
             KITISASNREVPVHRCILSARSPFFKA+FSGS  KEKG   +E+KEL KDYD+GFDS+
Sbjct: 61  DAKITISASNREVPVHRCILSARSPFFKAMFSGSLGKEKGAVKYELKELTKDYDVGFDSL 120

Query: 118 VTVLSYLYNGKVRPLPKGVCVCVDEDCSHVACRPAVDFMVEVLYAAFTFQVPELVALYQR 177
           V VL YLY+GKVRPLPKGVCVCVDEDCSHVACRPAVDFMVEVLYA+FTFQVPELVALYQR
Sbjct: 121 VAVLGYLYSGKVRPLPKGVCVCVDEDCSHVACRPAVDFMVEVLYASFTFQVPELVALYQR 180

Query: 178 HLLDILEKVAIDDILVVLSVANICGKACEKLLTRCIEIVVKSYVDIVTLDKALPQNIVKQ 237
           HLLDIL+KVAIDDILVVLSVAN CGKACE+L TRCIEI+VKS  DIVTLDKALPQ+IVKQ
Sbjct: 181 HLLDILDKVAIDDILVVLSVANTCGKACERLFTRCIEIIVKSDADIVTLDKALPQHIVKQ 240

Query: 238 ITDSRLEIASDTPQTTSYPDKHIKRIHRALDSDDVELVRMLLKEAHTNLDDAHALHYAVA 297
           ITDSR E+  DTP++T YPDKH+KRIHRALDSDDVELVRMLLKEAHTNLDDAHALHYAVA
Sbjct: 241 ITDSRSELGLDTPESTGYPDKHVKRIHRALDSDDVELVRMLLKEAHTNLDDAHALHYAVA 300

Query: 298 YCDAKTTTELLDLGIADVNCRNLRGYTVLHVAAMRKEPKIIVSLLTKGARPSDLTSDGRK 357
           YCDAKTTTELLDLGIADVNCRN RGYTVLHVAAMRKEP+IIV+LLTKGARPSDLTSDGRK
Sbjct: 301 YCDAKTTTELLDLGIADVNCRNSRGYTVLHVAAMRKEPRIIVTLLTKGARPSDLTSDGRK 360

Query: 358 ALQISKRLTRASDYYKSIEEGKASPKERLCIEILEQAERRDPLLGEA-FSFSCYGWRLDW 416
           ALQISK+LTRA+DYYKS EEGKASPKERLCIEILEQAERRDPL  EA  S +  G  L  
Sbjct: 361 ALQISKQLTRAADYYKSTEEGKASPKERLCIEILEQAERRDPLHVEASLSLAMAGDDLRM 420

Query: 417 QKFYSPWKQKLQWILL 432
           +  Y   +  L  +L 
Sbjct: 421 KLLYLENRVGLAKLLF 436


>29975.m000753 Regulatory protein NPR1, putative
          Length = 590

 Score =  333 bits (855), Expect = 8e-92,   Method: Compositional matrix adjust.
 Identities = 178/399 (44%), Positives = 259/399 (64%), Gaps = 13/399 (3%)

Query: 14  SNGSSTCCIETLSTPNPPNP-EISALQQLSKSLESIXXXXXXXXXXXXKITISASNREVP 72
           SNGS T  I T S     +  E+ +L +LS +LE +               I    + V 
Sbjct: 20  SNGSITQAISTSSGFEARSSLEVISLTKLSSNLEKLLIDSSCDYSDA---DIVVEGKPVG 76

Query: 73  VHRCILSARSPFFKAVFS---GSAAKEKGQNFEVKELAKDYDIGFDSIVTVLSYLYNGKV 129
           +HRCIL+ARS FF  +F    GS  K+    + + +L    ++G+++ +  L+YLY GK+
Sbjct: 77  IHRCILAARSRFFHDLFKQEKGSLEKDGKPKYCMNDLLPCGEVGYEAFLIFLNYLYTGKL 136

Query: 130 RPLPKGVCVCVDEDCSHVACRPAVDFMVEVLYAAFTFQVPELVALYQRHLLDILEKVAID 189
           +P P  V  CVD  C+H ACRPA++F VE+LYA+  FQVPELV+L+QR LL+ + K  ++
Sbjct: 137 KPSPMEVSTCVDNVCTHDACRPAINFAVELLYASSIFQVPELVSLFQRRLLNFVGKTYVE 196

Query: 190 DILVVLSVANICGKACEKLLTRCIEIVVKSYVDIVTLDKALPQNIVKQITDSRLEIASDT 249
           D++ +L VA  C     +L+ +C++ + +S +D ++++K LP  + + I   R++  SD 
Sbjct: 197 DVIPILVVAFHC--QSNQLVAQCVDRIARSDLDNISIEKELPYEVAENIRLLRIKPISDD 254

Query: 250 PQTTSYPD----KHIKRIHRALDSDDVELVRMLLKEAHTNLDDAHALHYAVAYCDAKTTT 305
            +     D    K I+RIH+ALDSDDVELV++LL E+   +DDA+ALHYA AYCD K  +
Sbjct: 255 EENVEVVDPLREKRIRRIHKALDSDDVELVKLLLTESEVTMDDANALHYATAYCDPKVVS 314

Query: 306 ELLDLGIADVNCRNLRGYTVLHVAAMRKEPKIIVSLLTKGARPSDLTSDGRKALQISKRL 365
           E+L LG+ADVN RN +GYTVLH+AAMR+EP +IVSLLTKGA   DLTSDGR A+ I +RL
Sbjct: 315 EVLGLGLADVNRRNSQGYTVLHIAAMRREPSVIVSLLTKGACALDLTSDGRSAVSICRRL 374

Query: 366 TRASDYYKSIEEGKASPKERLCIEILEQAERRDPLLGEA 404
           TR  DY+   E+G+ + K+RLCI++LE+  RR+P+ G+A
Sbjct: 375 TRPKDYHAKTEQGQEANKDRLCIDVLEREMRRNPMAGDA 413


>29941.m000229 aberrant large forked product, putative
          Length = 491

 Score =  159 bits (401), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 122/373 (32%), Positives = 178/373 (47%), Gaps = 44/373 (11%)

Query: 62  ITISASNREVPVHRCILSARSPFFKAVFSG----SAAKEKGQNFEVKELAKDY------- 110
           +T S   R V  HRCIL+ARS FF+  F G    S     G                   
Sbjct: 27  VTFSVEGRLVHAHRCILAARSLFFRKFFCGPEPPSGLDPSGSRINHPGGGGGGSGGGVSR 86

Query: 111 --------DIGFDSIVTVLSYLYNGKVRPLPKG---VCVCVDEDCSHVACRPAVDFMVEV 159
                    +G++  + +L +LY+G+V  +P+       C +  C H  C  AVD  ++ 
Sbjct: 87  GNNVIPVNSVGYEVFLLLLQFLYSGQVSIVPQKHEPRPNCGERGCWHTHCTSAVDLALDT 146

Query: 160 LYAAFTFQVPELVALYQRHLLDILEKVAIDDILVVLSVANICGKACEKLLTRCIEIVVKS 219
           L AA  F V +L  L Q+ L  ++EK +I+D++ VL  +    +   +L T C  +  KS
Sbjct: 147 LAAARYFGVEQLALLTQKQLASMVEKASIEDVMKVLIASR--KQDMHQLWTTCSHLAAKS 204

Query: 220 YVDIVTLDKALPQNIVKQITDSRLEIA-------------SDTPQTTSYPDKHIKRIHRA 266
            +    L K LP ++V +I + RL+ +              D        D+ I+R+ RA
Sbjct: 205 GLPPEVLAKHLPIDVVAKIEELRLKSSLARRSLMPHHHHHHDLTTAADLEDQKIRRMRRA 264

Query: 267 LDSDDVELVRMLLKEAHTNLDDAHALHYAVAYCDAKTTTELLDLGIADVNC-RNLRGYTV 325
           LDS DVELV++++     NLD+A ALHYAV  C  +    LL+LG ADVN      G T 
Sbjct: 265 LDSSDVELVKLMVMGEGLNLDEALALHYAVENCSREVVKALLELGAADVNYPAGPAGKTP 324

Query: 326 LHVAAMRKEPKIIVSLLTKGARPSDLTSDGRKALQISKRLTRASDY-YKSIEEGKAS--- 381
           LH+AA    P ++  LL   A P+  T DG   L I + LT  SD+ +K    G A    
Sbjct: 325 LHIAAEMVSPDMVAVLLDHHADPNVRTVDGVTPLDILRTLT--SDFLFKGAVPGLAHIEP 382

Query: 382 PKERLCIEILEQA 394
            K RLC+E+++ A
Sbjct: 383 NKLRLCLELVQSA 395