Jatropha Genome Database

JcCB0424661.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0424661.10 + phase: 2 /pseudo/partial
         (338 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29506.m000171 EXECUTER1 protein, chloroplast precursor, putative      449   e-127
30147.m013960 EXECUTER1 protein, chloroplast precursor, putative      125   2e-29

>29506.m000171 EXECUTER1 protein, chloroplast precursor, putative
          Length = 675

 Score =  449 bits (1156), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 229/320 (71%), Positives = 247/320 (77%)

Query: 19  KAPGATSRLNPPGPTEGKSDLFVVXXXXXXXXXXXXXXXXLAEGLPGFQNILRDMIPGMK 78
           KAPGA SR+NPPGPTE KSDLFVV                +AEGLPGFQNILRDM+PG+K
Sbjct: 271 KAPGAPSRMNPPGPTEEKSDLFVVSTEDTDDGDETEDGSDIAEGLPGFQNILRDMVPGVK 330

Query: 79  LKVLKVTTPAKVDKDFISKVIXXXXXXXXXXXXXXXXXXXGDDELGSESDQXXXXXXXXX 138
           +KVLKVTT +KVD+DFISKVI                    +DE   ESDQ         
Sbjct: 331 VKVLKVTTSSKVDRDFISKVIEQIMDEEDEEEDTELQSVEAEDESSGESDQEKDEIEMDA 390

Query: 139 XXXXXXSEGPSEISFKVVVGGLAQKFSGSMPVKESLRVPAKLEKKGRRSFLFSIEKDVNQ 198
                  +GPSEIS KVVVGGLAQKF GS+P KESLRVPAKLEKKGR SF FSIEKDVNQ
Sbjct: 391 VHGIIEDDGPSEISVKVVVGGLAQKFPGSVPSKESLRVPAKLEKKGRWSFSFSIEKDVNQ 450

Query: 199 QDSGAKEAASADRKAKFQGQRSVDNIMLDLAKFIGKEKIPLKVLKDVGDLINFTLSQAQN 258
           QD GAK AAS DRKAK QGQRS D+IMLDLAKFIG+EKIP+KVLKDV DLINFTLSQAQN
Sbjct: 451 QDPGAKGAASVDRKAKLQGQRSADSIMLDLAKFIGQEKIPMKVLKDVRDLINFTLSQAQN 510

Query: 259 RQPLSGSTTFHRIEISASPDPLNGLYIGAHGLYSSEVIQLQRKFGQWQDERGTNQPSNVE 318
           RQPLSGSTTFHRIE SASPDPLNGLYIGAHGLY+SEVI LQRKFGQWQD+RGT +PSN+E
Sbjct: 511 RQPLSGSTTFHRIETSASPDPLNGLYIGAHGLYTSEVIHLQRKFGQWQDDRGTKEPSNLE 570

Query: 319 FYEYVEAVKLTGDPYIAAGQ 338
           FYEYVEAVKLTGDPY+ AGQ
Sbjct: 571 FYEYVEAVKLTGDPYVPAGQ 590


>30147.m013960 EXECUTER1 protein, chloroplast precursor, putative
          Length = 658

 Score =  125 bits (315), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 95/291 (32%), Positives = 146/291 (50%), Gaps = 35/291 (12%)

Query: 61  EGLPGFQNILRDMIPGMKLKVLKVTTPAKV--DKDFISKVIXXXXXXXXXXXXXXXXXXX 118
           EG+    N L+D IPG+K+KV+ V    +V  D D + +++                   
Sbjct: 301 EGIKSVINFLKDKIPGLKVKVMNVNATEEVVEDNDSVKQLMQD----------------- 343

Query: 119 GDDELGSESDQXXXXXXXXXXXXXXXS-EGPSE-------ISFKVVVGGLAQKFSGSMPV 170
            D+++ S                   S EG ++       +  K+ +GG+      +   
Sbjct: 344 -DEKIASSESSEDESNELEEIQPAGVSVEGNTDPTDDGKDLDMKLFIGGVVHNDEDTPSK 402

Query: 171 KESLRVPAKLEKKGRRSFLFSIEKDVNQQDSGAKEAASADRKAKFQGQRSVDNIML-DLA 229
            E +R+PA+++   R SF   I +   + DS  KE  ++  K      + V  +M  D+A
Sbjct: 403 DEYVRLPAEIKDIERDSFALHIPEKSLEYDS--KERKASKIKVAAIAAKGVSELMPPDIA 460

Query: 230 K-FIGKEKIPLKVLKDVGDLINFTLSQAQNRQPLSGSTTFHRIEISASP-DPLNGLYIGA 287
           K F G +K+  KV +DV +++   +SQAQ +  LS  T F RI  S +  DP +GLY+GA
Sbjct: 461 KAFWGADKVSSKVSRDVREIVKLAVSQAQKQSRLSKHTNFSRINTSNNNFDPFDGLYVGA 520

Query: 288 HGLYSSEVIQLQRKFGQWQDERGTNQPSNVEFYEYVEAVKLTGDPYIAAGQ 338
            G Y +EV+QL+RKFG W      ++ S+VEF+EYVEAVKLTGD  + AGQ
Sbjct: 521 FGPYGTEVVQLRRKFGHWN--VTDDKSSDVEFFEYVEAVKLTGDLNVPAGQ 569