Jatropha Genome Database

JcCB0423521.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0423521.10 + phase: 0 /partial
         (148 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29711.m000323 triosephosphate isomerase, putative                     296   2e-81
27383.m000156 triosephosphate isomerase, putative                     193   3e-50
32915.m000014 triosephosphate isomerase, putative                      95   1e-20

>29711.m000323 triosephosphate isomerase, putative
          Length = 313

 Score =  296 bits (758), Expect = 2e-81,   Method: Compositional matrix adjust.
 Identities = 144/148 (97%), Positives = 147/148 (99%)

Query: 1   FIGKKAAYALSEGLGVIACIGELLEEREAGKTFDVCFQQLKAYADAVPSWDKIVIAYEPV 60
           FIGKKAAYALS+GLGVIACIGELLEEREAGKTFDVCFQQLKAYADAVPSWDKIVIAYEPV
Sbjct: 166 FIGKKAAYALSQGLGVIACIGELLEEREAGKTFDVCFQQLKAYADAVPSWDKIVIAYEPV 225

Query: 61  WAIGTGKVATPQQAQEVHVALRDWLKKNVSEAVASKTRIIYGGSVNGGNCAELAKQEDID 120
           WAIGTGKVATPQQAQEVHVALRDWLKKN+SE VASKTRIIYGGSVNGGNCAELAKQEDID
Sbjct: 226 WAIGTGKVATPQQAQEVHVALRDWLKKNISEEVASKTRIIYGGSVNGGNCAELAKQEDID 285

Query: 121 GFLVGGASLKGPEFATIVNSVTSKKVAA 148
           GFLVGGASLKGPEFATI+NSVTSKKVAA
Sbjct: 286 GFLVGGASLKGPEFATIINSVTSKKVAA 313


>27383.m000156 triosephosphate isomerase, putative
          Length = 254

 Score =  193 bits (490), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 97/145 (66%), Positives = 108/145 (74%), Gaps = 1/145 (0%)

Query: 1   FIGKKAAYALSEGLGVIACIGELLEEREAGKTFDVCFQQLKAYADAVPSWDKIVIAYEPV 60
           F+G K AYALS+GL VIAC+GE LE+REAG T DV   Q KA A+ V  W  +V+AYEPV
Sbjct: 109 FVGDKVAYALSQGLKVIACVGETLEQREAGSTMDVVAAQTKAIAERVKDWADVVLAYEPV 168

Query: 61  WAIGTGKVATPQQAQEVHVALRDWLKKNVSEAVASKTRIIYGGSVNGGNCAELAKQEDID 120
           WAIGTGKVATP QAQEVH  LR WLK+N S  VA+ TRIIYGGSV   NC ELA Q D+D
Sbjct: 169 WAIGTGKVATPAQAQEVHFELRKWLKENTSSQVAATTRIIYGGSVTATNCKELAAQPDVD 228

Query: 121 GFLVGGASLKGPEFATIVNSVTSKK 145
           GFLVGGASLK PEF  I+ S   KK
Sbjct: 229 GFLVGGASLK-PEFIEIIKSAEVKK 252


>32915.m000014 triosephosphate isomerase, putative
          Length = 70

 Score = 94.7 bits (234), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 48/71 (67%), Positives = 51/71 (71%), Gaps = 1/71 (1%)

Query: 77  VHVALRDWLKKNVSEAVASKTRIIYGGSVNGGNCAELAKQEDIDGFLVGGASLKGPEFAT 136
           VH  LR WL  NVS  VA+ TRIIYGGSVNG NC ELA Q D+DGFLVGGASLK PEF  
Sbjct: 1   VHFELRKWLHDNVSSEVAASTRIIYGGSVNGANCKELAGQPDLDGFLVGGASLK-PEFVN 59

Query: 137 IVNSVTSKKVA 147
           I+ S   KK A
Sbjct: 60  IIKSAAVKKSA 70