Jatropha Genome Database

JcCB0420431.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0420431.10 + phase: 2 /partial
         (112 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

30093.m000358 ATP phosphoribosyltransferase, putative                 129   2e-31

>30093.m000358 ATP phosphoribosyltransferase, putative
          Length = 159

 Score =  129 bits (325), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 75/117 (64%), Positives = 85/117 (72%), Gaps = 7/117 (5%)

Query: 2   MSMSLLHPNFQQCPAAFSSSTS---LFPSHASFRIISLKPSGPSSLRP---VFCCIXXXX 55
           MSMS+L PNFQQCP++ +S TS   L PS +SFRII+LKPS  S L+    V C +    
Sbjct: 1   MSMSILQPNFQQCPSSSASFTSSTSLCPSFSSFRIITLKPS-ISHLKQQQRVVCGVSQSQ 59

Query: 56  XXXXXXXXXTRASERNEIRLGLPSKGRMASDTIDLLKDCQLSVKQVNPRQYVAQIPQ 112
                     + SERNEIRLGLPSKGRMASDT+DLLKDCQLSVKQVNPRQYVAQIPQ
Sbjct: 60  VSVVNGTIDNKVSERNEIRLGLPSKGRMASDTLDLLKDCQLSVKQVNPRQYVAQIPQ 116