Jatropha Genome Database

JcCB0402101.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0402101.10 - phase: 0 /partial
         (181 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

30221.m002257 strictosidine synthase, putative                        263   5e-71
28094.m000175 strictosidine synthase, putative                        149   6e-37
29577.m000452 strictosidine synthase, putative                        122   9e-29
28094.m000178 strictosidine synthase, putative                        108   1e-24
30138.m003846 strictosidine synthase, putative                         76   9e-15
29739.m003743 Adipocyte plasma membrane-associated protein, puta...    69   1e-12
29830.m001424 Adipocyte plasma membrane-associated protein, puta...    57   6e-09

>30221.m002257 strictosidine synthase, putative
          Length = 391

 Score =  263 bits (671), Expect = 5e-71,   Method: Compositional matrix adjust.
 Identities = 129/168 (76%), Positives = 142/168 (84%), Gaps = 7/168 (4%)

Query: 14  IRNHFVASGISLPCSVANAATFLLYWYSFNICKCRLRKYWLKGEKAGTSEVLAILPGFPD 73
           +RN    +G+SL    +   TF ++         RL KYWLKGEKAGT+EVLAILPGFPD
Sbjct: 231 VRNVQFPNGVSL----SKDGTFFVFCEG---SMGRLSKYWLKGEKAGTTEVLAILPGFPD 283

Query: 74  NVRTNEEGNFWVAVHCRRSLYTYICALYPKLRMFMLKLPISAKIQYLLHIGGRLHAVAVK 133
           NVRTNEEGNFWVAVHCRR+ Y+YICALYPKLR F+LKLPISAKI YL HIGGRLHAVAVK
Sbjct: 284 NVRTNEEGNFWVAVHCRRTYYSYICALYPKLRTFLLKLPISAKIHYLFHIGGRLHAVAVK 343

Query: 134 YSPEGKILQILEDSQGKVVKAISEVEEKDGKLWMGSVLMPFIGVYNLA 181
           YSPEGK+LQILEDSQGKVVKAISEVEE+DGKLWMGSVLMPF+GVYNLA
Sbjct: 344 YSPEGKLLQILEDSQGKVVKAISEVEERDGKLWMGSVLMPFVGVYNLA 391


>28094.m000175 strictosidine synthase, putative
          Length = 372

 Score =  149 bits (376), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 68/134 (50%), Positives = 93/134 (69%)

Query: 47  CRLRKYWLKGEKAGTSEVLAILPGFPDNVRTNEEGNFWVAVHCRRSLYTYICALYPKLRM 106
           C++ ++WL G  AG  +V A LPGFPDN+R N +G FWVA+H +      +      +  
Sbjct: 239 CQISRFWLHGPNAGKVDVFAKLPGFPDNIRRNSKGEFWVALHAKEGFLAKLALSNSWIGK 298

Query: 107 FMLKLPISAKIQYLLHIGGRLHAVAVKYSPEGKILQILEDSQGKVVKAISEVEEKDGKLW 166
            +LK P+S K  + L +GG+ HA A+K S +GKI+Q+LED  GK ++ ISEVEEKDGKLW
Sbjct: 299 TLLKFPLSFKQLHSLLVGGKPHATAIKLSGDGKIVQVLEDCDGKRLRFISEVEEKDGKLW 358

Query: 167 MGSVLMPFIGVYNL 180
           +GSVLMPF+G+YNL
Sbjct: 359 IGSVLMPFLGIYNL 372


>29577.m000452 strictosidine synthase, putative
          Length = 372

 Score =  122 bits (306), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 63/157 (40%), Positives = 96/157 (61%), Gaps = 6/157 (3%)

Query: 16  NHFVASGISLPCSV--ANAATFLLYWYSFNICKCRLRKYWLKGEKAGTSEVLAILPGFPD 73
            H V  G++ P  V  +    FLL+  + N   CR+ KYW++G K G  E++A LPGFPD
Sbjct: 209 THIVLDGLAFPNGVQLSKDQKFLLFTETTN---CRIMKYWIEGPKTGNVELVANLPGFPD 265

Query: 74  NVRTNEEGNFWVAVHCRRSLYTYICALYPKLRMFMLKLPISAKIQYLLHIGGRLHAVAVK 133
           N+R N++G++WVA+ C R+    I    P +R    +LPI   I   L +G +++ V   
Sbjct: 266 NIRVNDKGHYWVAIDCCRTRAQEILTHNPWIRSVYFRLPIRMSILARL-MGMKMYTVVSL 324

Query: 134 YSPEGKILQILEDSQGKVVKAISEVEEKDGKLWMGSV 170
           ++  G+IL++LED +G V+K +SEV E  GKLW+G+V
Sbjct: 325 FNENGEILEVLEDPKGVVMKLVSEVREVQGKLWIGTV 361


>28094.m000178 strictosidine synthase, putative
          Length = 375

 Score =  108 bits (271), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 60/159 (37%), Positives = 87/159 (54%), Gaps = 7/159 (4%)

Query: 23  ISLPCSVA--NAATFLLYWYSFNICKCRLRKYWLKGEKAGTSEVLAILPGFPDNVRTNEE 80
           +S P  VA      F+L         CR+ KYW+K  KAG  EV A +PGFPDN++ +  
Sbjct: 220 LSFPNGVALSKDGNFILI---AETTTCRVLKYWIKTSKAGILEVFAQVPGFPDNIKRSPR 276

Query: 81  GNFWVAVHCRRSLYTYICALYPKLRMFMLKLPISAKIQYLLHIGGRLHAVAVKYSPEGKI 140
           G +WVA++ RR  +      +P +   ++KLP      Y +    R   +AV+    G I
Sbjct: 277 GGYWVAINSRRDKFLEWVLSHPWIGNSLIKLPFDLMKIYSILGKYRGTGMAVRLDENGDI 336

Query: 141 LQILEDSQGKVVKAISEVEEKDGKLWMGSVLMPFIGVYN 179
           L++ ED      K +SEV EKDGKLW+GS+ +PF+G Y+
Sbjct: 337 LEVFEDRN--RFKTLSEVMEKDGKLWIGSINLPFVGRYD 373


>30138.m003846 strictosidine synthase, putative
          Length = 352

 Score = 75.9 bits (185), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 44/158 (27%), Positives = 75/158 (47%), Gaps = 33/158 (20%)

Query: 22  GISLPCSV--ANAATFLLYWYSFNICKCRLRKYWLKGEKAGTSEVLAILPGFPDNVRTNE 79
           G++ P  V  +   ++LL   S N    ++ K+ L     G   V A L  FPDN+R N+
Sbjct: 223 GLAFPNGVVLSKDNSYLLLVESMNF---QVLKFPLSSYGVGVPHVFASLDRFPDNIRRND 279

Query: 80  EGNFWVAVHCRRSLYTYICALYPKLRMFMLKLPISAKIQYLLHIGGRLHAVAVKYSPEGK 139
            G+FWVA++  R                        K+Q     G     V ++++  G+
Sbjct: 280 NGDFWVALNTAR-----------------------GKLQ-----GAVEDPVGIRFNEYGR 311

Query: 140 ILQILEDSQGKVVKAISEVEEKDGKLWMGSVLMPFIGV 177
           ++Q++  + G  + ++SE+EE DG+LW GS   P++G 
Sbjct: 312 VVQVVNGNGGDTLDSVSEIEEHDGRLWFGSPTQPYVGT 349


>29739.m003743 Adipocyte plasma membrane-associated protein,
           putative
          Length = 356

 Score = 68.9 bits (167), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 52/170 (30%), Positives = 82/170 (48%), Gaps = 32/170 (18%)

Query: 21  SGISLPCSVANA--ATFLLYWYSFNICKCRLRKYWLKGEKAGTSEVLAI-LPGFPDNVRT 77
            G+  P  VA +    +L++  S+   K R +K+WLKGE  G +E L   LPG PDN+  
Sbjct: 198 DGLCFPNGVALSWEEDYLVFCESW---KFRCQKHWLKGEDKGKTETLIDNLPGAPDNINL 254

Query: 78  NEEGNFWVA-----------VHCRRSLYTYICALYPKLRMFMLKLPISAKIQYLLHIGGR 126
             +G+FW+            VH  ++   ++ A +PKL                L  G  
Sbjct: 255 APDGSFWICLLQVAADGLEFVHTSKA-SKHLVASFPKL--------------IELVNGVE 299

Query: 127 LHAVAVKYSPEGKILQILEDSQGKVVKAISEVEEKDGKLWMGSVLMPFIG 176
            +A+ V  + +GKI +  +D  GKVV  ++   E DG L++GS+   F+G
Sbjct: 300 KNAMVVNVAADGKITRKFDDPDGKVVSFVTSAVEFDGHLYLGSLKNNFVG 349


>29830.m001424 Adipocyte plasma membrane-associated protein,
           putative
          Length = 380

 Score = 56.6 bits (135), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 24/61 (39%), Positives = 36/61 (59%)

Query: 48  RLRKYWLKGEKAGTSEVLAILPGFPDNVRTNEEGNFWVAVHCRRSLYTYICALYPKLRMF 107
           R RKY+++G K G  E    LPG PDN+ ++  G+FW+A+    S +  +   YP +R F
Sbjct: 253 RCRKYYIQGNKKGQIENFISLPGAPDNIHSDGHGHFWIALSSGNSAFVDLVYRYPFIRKF 312

Query: 108 M 108
           M
Sbjct: 313 M 313