Jatropha Genome Database

JcCB0402071.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0402071.10 - phase: 0 /partial
         (321 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

27914.m000427 glutamate decarboxylase, putative                       624   e-179
29662.m000447 glutamate decarboxylase, putative                       584   e-167
27914.m000425 glutamate decarboxylase, putative                       579   e-166
29780.m001375 glutamate decarboxylase, putative                       538   e-153
29929.m004623 sphingosine phosphate lyase, putative                    69   4e-12

>27914.m000427 glutamate decarboxylase, putative
          Length = 498

 Score =  624 bits (1610), Expect = e-179,   Method: Compositional matrix adjust.
 Identities = 295/321 (91%), Positives = 310/321 (96%)

Query: 1   MALSKTALDTDVSVHSTFASRYVRASLPRFKMPVNSIPKEAAYQIINDELMLDGNPRLNL 60
           M LSKTA ++DVSVHSTFASRYVRASLPRFKMP +SIPKEAAYQIINDELMLDGNPRLNL
Sbjct: 1   MVLSKTASESDVSVHSTFASRYVRASLPRFKMPESSIPKEAAYQIINDELMLDGNPRLNL 60

Query: 61  ASFVTTWMEPECDKLIMASVNKNYVDMDEYPVTTELQNRCVNMIAHLFNAPLGEAEAAVG 120
           ASFVTTWMEPECDKLIMAS+NKNYVDMDEYPVTTELQNRCVNMIAHLFNAPLG++E AVG
Sbjct: 61  ASFVTTWMEPECDKLIMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNAPLGDSETAVG 120

Query: 121 VGTVGSSEAIMLAGLAFKRKWQNRRKAQGKPIDNPNIVTGANVQVCWEKFARYFEVELKE 180
           VGTVGSSEAIMLAGLAFKRKWQN+RKA+GKP D PNIVTGANVQVCWEKFARYFEVELKE
Sbjct: 121 VGTVGSSEAIMLAGLAFKRKWQNKRKAEGKPYDKPNIVTGANVQVCWEKFARYFEVELKE 180

Query: 181 VKLKPDYYVLDPEKAVEMVDENTICVAAILGSTLNGEFEDVKQLNDLLMEKNKETGWETP 240
           VKL+  YYV+DP KAVEMVDENTICVAAILGSTLNGEFEDVK LNDLL EKNK+TGW+TP
Sbjct: 181 VKLRDGYYVMDPVKAVEMVDENTICVAAILGSTLNGEFEDVKLLNDLLTEKNKQTGWDTP 240

Query: 241 IHVDAASGGFIAPFLYPELEWDFRLPLVKSINVSGHKYGLVYAGIGWVIWRSKEDLPEEL 300
           IHVDAASGGFIAPFLYPELEWDFRLPLVKSINVSGHKYGLVYAGIGWVIWR+K+DLP+EL
Sbjct: 241 IHVDAASGGFIAPFLYPELEWDFRLPLVKSINVSGHKYGLVYAGIGWVIWRNKDDLPDEL 300

Query: 301 IFHINYLGADQPTFTLNFSKG 321
           IFHINYLGADQPTFTLNFSKG
Sbjct: 301 IFHINYLGADQPTFTLNFSKG 321


>29662.m000447 glutamate decarboxylase, putative
          Length = 529

 Score =  584 bits (1505), Expect = e-167,   Method: Compositional matrix adjust.
 Identities = 269/321 (83%), Positives = 298/321 (92%)

Query: 1   MALSKTALDTDVSVHSTFASRYVRASLPRFKMPVNSIPKEAAYQIINDELMLDGNPRLNL 60
           M +S T  D+D  +HSTFASRYVR  +PRFKMP  S+PKEAAYQ+INDELMLDGNPRLNL
Sbjct: 40  MVISTTITDSDEVLHSTFASRYVRTPVPRFKMPEKSMPKEAAYQVINDELMLDGNPRLNL 99

Query: 61  ASFVTTWMEPECDKLIMASVNKNYVDMDEYPVTTELQNRCVNMIAHLFNAPLGEAEAAVG 120
           ASFVTTWMEPEC+ LIMAS+NKNYVDMDEYPVTTELQ+RCVNMIAH+F+AP+G+ E AVG
Sbjct: 100 ASFVTTWMEPECNNLIMASINKNYVDMDEYPVTTELQDRCVNMIAHMFHAPVGDDETAVG 159

Query: 121 VGTVGSSEAIMLAGLAFKRKWQNRRKAQGKPIDNPNIVTGANVQVCWEKFARYFEVELKE 180
           VGTVGSSEAIMLAGLAFKRKWQ++R A+GKP D PNIVTGANVQVCWEKFARYFEVELKE
Sbjct: 160 VGTVGSSEAIMLAGLAFKRKWQHKRIAEGKPSDKPNIVTGANVQVCWEKFARYFEVELKE 219

Query: 181 VKLKPDYYVLDPEKAVEMVDENTICVAAILGSTLNGEFEDVKQLNDLLMEKNKETGWETP 240
           VKLK  YYV+DP KAVEMVDENTIC+AAILGSTL GEFEDVK L++LL ++N+ETGW TP
Sbjct: 220 VKLKEGYYVMDPVKAVEMVDENTICIAAILGSTLTGEFEDVKLLSELLTKRNEETGWNTP 279

Query: 241 IHVDAASGGFIAPFLYPELEWDFRLPLVKSINVSGHKYGLVYAGIGWVIWRSKEDLPEEL 300
           IHVDAASGGFIAPF+YP+LEWDFRLPLVKSINVSGHKYGLVYAG+GWV+WR+KEDLPEEL
Sbjct: 280 IHVDAASGGFIAPFVYPDLEWDFRLPLVKSINVSGHKYGLVYAGVGWVVWRTKEDLPEEL 339

Query: 301 IFHINYLGADQPTFTLNFSKG 321
           IFHINYLG+DQPTFTLNFSKG
Sbjct: 340 IFHINYLGSDQPTFTLNFSKG 360


>27914.m000425 glutamate decarboxylase, putative
          Length = 465

 Score =  579 bits (1493), Expect = e-166,   Method: Compositional matrix adjust.
 Identities = 273/290 (94%), Positives = 284/290 (97%)

Query: 32  MPVNSIPKEAAYQIINDELMLDGNPRLNLASFVTTWMEPECDKLIMASVNKNYVDMDEYP 91
           MP NSIPKEAAYQIINDELMLDGNPRLNLASFVTTWMEPECDKLIM+SVNKNYVDMDEYP
Sbjct: 1   MPQNSIPKEAAYQIINDELMLDGNPRLNLASFVTTWMEPECDKLIMSSVNKNYVDMDEYP 60

Query: 92  VTTELQNRCVNMIAHLFNAPLGEAEAAVGVGTVGSSEAIMLAGLAFKRKWQNRRKAQGKP 151
           VTTELQNRCVNMIAHLFNAPLG++E AVGVGTVGSSEAIMLAGLAFKRKWQNRRKA+GKP
Sbjct: 61  VTTELQNRCVNMIAHLFNAPLGDSETAVGVGTVGSSEAIMLAGLAFKRKWQNRRKAEGKP 120

Query: 152 IDNPNIVTGANVQVCWEKFARYFEVELKEVKLKPDYYVLDPEKAVEMVDENTICVAAILG 211
            D+PNIVTGANVQVCWEKFARYFEVELKEVKL+ +YYV+DPEKAVEMVDENTICVAAILG
Sbjct: 121 YDSPNIVTGANVQVCWEKFARYFEVELKEVKLRENYYVMDPEKAVEMVDENTICVAAILG 180

Query: 212 STLNGEFEDVKQLNDLLMEKNKETGWETPIHVDAASGGFIAPFLYPELEWDFRLPLVKSI 271
           STLNGEFEDVK LNDLL+EKNK+TGW TPIHVDAASGGFIAPFLYPELEWDFRLPLVKSI
Sbjct: 181 STLNGEFEDVKLLNDLLVEKNKKTGWNTPIHVDAASGGFIAPFLYPELEWDFRLPLVKSI 240

Query: 272 NVSGHKYGLVYAGIGWVIWRSKEDLPEELIFHINYLGADQPTFTLNFSKG 321
           NVSGHKYGLVYAGIGW+IWRSKEDLPEELIFHINYLGADQPTFTLNFSKG
Sbjct: 241 NVSGHKYGLVYAGIGWIIWRSKEDLPEELIFHINYLGADQPTFTLNFSKG 290


>29780.m001375 glutamate decarboxylase, putative
          Length = 297

 Score =  538 bits (1385), Expect = e-153,   Method: Compositional matrix adjust.
 Identities = 257/287 (89%), Positives = 271/287 (94%)

Query: 1   MALSKTALDTDVSVHSTFASRYVRASLPRFKMPVNSIPKEAAYQIINDELMLDGNPRLNL 60
           M LSK A  +DVSVHSTFASRYVR SLPR+KMP NSIPKEAA+QIINDELMLDG PRLNL
Sbjct: 1   MVLSKIASQSDVSVHSTFASRYVRESLPRYKMPENSIPKEAAFQIINDELMLDGKPRLNL 60

Query: 61  ASFVTTWMEPECDKLIMASVNKNYVDMDEYPVTTELQNRCVNMIAHLFNAPLGEAEAAVG 120
           ASFVTTWMEPECDKLIM ++NKNYVDMDEYPVTTELQNRCVNMIAHLFNAPLG++EAAVG
Sbjct: 61  ASFVTTWMEPECDKLIMDAMNKNYVDMDEYPVTTELQNRCVNMIAHLFNAPLGDSEAAVG 120

Query: 121 VGTVGSSEAIMLAGLAFKRKWQNRRKAQGKPIDNPNIVTGANVQVCWEKFARYFEVELKE 180
           VGTVGSSEAIMLAGLAFKRKWQN+RKA+GKP D PNIVTGANVQVCWEKFARYFEVELKE
Sbjct: 121 VGTVGSSEAIMLAGLAFKRKWQNKRKAEGKPYDKPNIVTGANVQVCWEKFARYFEVELKE 180

Query: 181 VKLKPDYYVLDPEKAVEMVDENTICVAAILGSTLNGEFEDVKQLNDLLMEKNKETGWETP 240
           VKLK  YYV+DP +A EMVDENTICVAAILGSTLNGEFEDVK LNDLL+EKNK TGW+TP
Sbjct: 181 VKLKEGYYVMDPVQAAEMVDENTICVAAILGSTLNGEFEDVKLLNDLLVEKNKVTGWDTP 240

Query: 241 IHVDAASGGFIAPFLYPELEWDFRLPLVKSINVSGHKYGLVYAGIGW 287
           IHVDAASGGFIAPFL+PELEWDFRLPLVKSINVSGHKYGLVYAGIGW
Sbjct: 241 IHVDAASGGFIAPFLWPELEWDFRLPLVKSINVSGHKYGLVYAGIGW 287


>29929.m004623 sphingosine phosphate lyase, putative
          Length = 541

 Score = 68.6 bits (166), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 57/223 (25%), Positives = 99/223 (44%), Gaps = 25/223 (11%)

Query: 81  NKNYVDMDEYPVTTELQNRCVNMIAHLFNAPLGEAEAA-----VGVGTVGSSEAIMLAGL 135
           + N + +D +      +   V M A L    LG  E A      G  T G +E+I+LA +
Sbjct: 157 HTNPLHLDVFQSIARFEAEVVAMTASL----LGSKEKASGGEICGNMTSGGTESILLA-V 211

Query: 136 AFKRKWQNRRKAQGKPIDNPNIVTGANVQVCWEKFARYFEVELKEVKLKPDYYVLDPEKA 195
              R +   +K     I  P ++   +    ++K A+YF ++L  V +  ++   D +  
Sbjct: 212 KSSRDYMKVKKG----ITRPEMIIPESAHSAYDKAAQYFNIKLWRVPVNKEFQA-DAKAI 266

Query: 196 VEMVDENTICVAAILGSTLNGEFEDVKQLNDLLMEKNKETGWETPIHVDAASGGFIAPFL 255
              ++ NT+ +        +G  + +++L +L         +    HVD   GGF+ PF 
Sbjct: 267 RRHINRNTVLIVGSAPGFPHGIIDPIEELGELAFR------YGICFHVDLCLGGFVLPFA 320

Query: 256 ----YPELEWDFRLPLVKSINVSGHKYGLVYAGIGWVIWRSKE 294
               YP   +DF +  V SI+V  HKYGL   G   V++R+ +
Sbjct: 321 RKLGYPMPPFDFSVKGVTSISVDVHKYGLAPKGTSVVLYRNHD 363