Jatropha Genome Database

JcCB0400871.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0400871.10 - phase: 0 /partial
         (84 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29889.m003302 map3k delta-1 protein kinase, putative                   58   9e-10

>29889.m003302 map3k delta-1 protein kinase, putative
          Length = 796

 Score = 58.2 bits (139), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 30/43 (69%), Positives = 37/43 (86%), Gaps = 1/43 (2%)

Query: 1  MDTQPA-EELLRKIQELEAGQAHLEQEMSKLKLTSDPKSEHDL 42
          M++ PA EELL+KIQELEAGQAHL+++MSK KLTSDP S+  L
Sbjct: 1  MESPPAAEELLKKIQELEAGQAHLKEQMSKFKLTSDPVSDSQL 43