Jatropha Genome Database

JcCB0399791.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0399791.10 + phase: 1 /partial
         (494 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

30180.m001064 Auxin efflux carrier component, putative                904   0.0  
29816.m000677 Auxin efflux carrier component, putative                561   e-160
29662.m000472 Auxin efflux carrier component, putative                550   e-157
27985.m000882 Auxin efflux carrier component, putative                387   e-108
29822.m003474 conserved hypothetical protein                          174   9e-44
30128.m009025 conserved hypothetical protein                          148   5e-36
29651.m000296 hypothetical protein                                    148   5e-36
29804.m001502 hypothetical protein                                    129   3e-30

>30180.m001064 Auxin efflux carrier component, putative
          Length = 613

 Score =  904 bits (2337), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 451/485 (92%), Positives = 465/485 (95%), Gaps = 3/485 (0%)

Query: 1   SLEWSITLFSLSTLPNTLVMGIPLLKGMYGDFSGSLMVQIVVLQCIIWYTLMLFLFEYRG 60
           SLEWSITLFSLSTLPNTLVMGIPLLKGMYGD SGSLMVQIVVLQCIIWYTLMLFLFEYRG
Sbjct: 97  SLEWSITLFSLSTLPNTLVMGIPLLKGMYGDDSGSLMVQIVVLQCIIWYTLMLFLFEYRG 156

Query: 61  ARILIGEQFPDTAGSIISFRVDSDIISLDGREPLQTEAELGEDGKLHVTVRKSTSSRSEI 120
           AR+LIGEQFPDTAGSIISFRVDSDIISLDGREPLQTEAE+GEDGKLHVTVRKSTSSRSEI
Sbjct: 157 ARLLIGEQFPDTAGSIISFRVDSDIISLDGREPLQTEAEVGEDGKLHVTVRKSTSSRSEI 216

Query: 121 FSRRSHGPNSGLSLTPRPSNLTNAEIYSLQSSRNPTPRGSSFNHTDFYSMVNGKNASNVS 180
           FSRRSHGPNSGLSLTPRPSNLTN EIYSLQSSRNPTPRGSSFNHTDFYSMVNGKNASNVS
Sbjct: 217 FSRRSHGPNSGLSLTPRPSNLTNVEIYSLQSSRNPTPRGSSFNHTDFYSMVNGKNASNVS 276

Query: 181 PRQSNFGNLPFDEENGGIGLFGNVSRANGGSAYPAPPNAGIFSPGVKKKANGTDNGKDLH 240
           PRQSNFGNLPFDEENGGIG+FGNVSR N GSAYPAPPNAGIFSPG KKKANG +NGKDLH
Sbjct: 277 PRQSNFGNLPFDEENGGIGVFGNVSRTN-GSAYPAPPNAGIFSPGAKKKANGAENGKDLH 335

Query: 241 MFVWSSSASPVSEGGIHVFRGGDYGNDFGGVAHQK-DNDEFGRDEFSFGNRPVTNGVDRE 299
           MFVWSSSASPVSEGGIHVFRGGD+G D GGVAHQK D DEFGRDEFSFGNRPV NGVDRE
Sbjct: 336 MFVWSSSASPVSEGGIHVFRGGDHGIDLGGVAHQKVDYDEFGRDEFSFGNRPVPNGVDRE 395

Query: 300 GPVLSKLGSSSTAELHPKTGVDGEPKPTAMPPASVMTRLILIMVWRKLIRNPNTYSSLIG 359
           GPVLSKLGSSSTAELHPKTGVDGEP+ TAMPPASVMTRLILIMVWRKLIRNPNTYSSLIG
Sbjct: 396 GPVLSKLGSSSTAELHPKTGVDGEPRATAMPPASVMTRLILIMVWRKLIRNPNTYSSLIG 455

Query: 360 LTWSLVSFKWNIVMPAIIARSISILSDAGLGMAMFSLGLFMALQPRIIACGNSIASFAMA 419
           LTWSLVSFK +I MPAIIA SI+ILS+AGLGMAMFSLGLFMALQPRIIACGNSIA+FAMA
Sbjct: 456 LTWSLVSFKLHIEMPAIIAGSIAILSNAGLGMAMFSLGLFMALQPRIIACGNSIATFAMA 515

Query: 420 VRFLTGPAVMAAASIAVGLRGVLLHVAIVQAALPQGIVPFVFAKEYNVHPDILSTGSSYN 479
           VRFLTGPAVMAAAS AVGLRGVLLH+AIVQAALPQGIVPFVFAKEYNVHPDILSTG ++ 
Sbjct: 516 VRFLTGPAVMAAASFAVGLRGVLLHIAIVQAALPQGIVPFVFAKEYNVHPDILSTG-AFV 574

Query: 480 TGLLH 484
             L+H
Sbjct: 575 HDLMH 579


>29816.m000677 Auxin efflux carrier component, putative
          Length = 646

 Score =  561 bits (1447), Expect = e-160,   Method: Compositional matrix adjust.
 Identities = 327/544 (60%), Positives = 374/544 (68%), Gaps = 84/544 (15%)

Query: 1   SLEWSITLFSLSTLPNTLVMGIPLLKGMYGDFSGSLMVQIVVLQCIIWYTLMLFLFEYRG 60
           SLEW IT+FSLSTLPNTLVMGIPLL  MY  ++GSLMVQ+VVLQCIIWYTL+LFLFEYRG
Sbjct: 97  SLEWMITIFSLSTLPNTLVMGIPLLIAMYDKYAGSLMVQVVVLQCIIWYTLLLFLFEYRG 156

Query: 61  ARILIGEQFPDTAGSIISFRVDSDIISLDGREPLQTEAELGEDGKLHVTVRKSTSSRSEI 120
           A++LI EQFP+TA SI+SF+VDSD++SLDGR+ L+T+AE+G DGKLHVTVRKS +SR   
Sbjct: 157 AKMLIMEQFPETAASIVSFKVDSDVVSLDGRDFLETDAEIGNDGKLHVTVRKSNASR--- 213

Query: 121 FSRRSHGPNSGLSLTPRPSNLTNAEIYSLQSSRNPTPRGSSFNHTDFYSMVN-----GKN 175
              RS GP S   LTPRPSNLT AEIYSL SSRNPTPRGS+FN +DFY+M+      G  
Sbjct: 214 ---RSLGPGSFSGLTPRPSNLTGAEIYSLSSSRNPTPRGSNFNTSDFYNMMGVQGFPGGR 270

Query: 176 ASNVSPR-----QSNFGNLP----FDEENGGIGL-----FGNVSRANGGSAYPAP-PNAG 220
            SN  P      QS+ G  P    F+E    +       FG        ++YPAP P   
Sbjct: 271 LSNFGPADLYSVQSSRGPTPRPSNFEENCAPMATISSPRFGFYPAQTVPTSYPAPNPE-- 328

Query: 221 IFSPGVKKKA---------------------NGTDNGKDLHMFVWSSSASPVSEGGIHVF 259
            FS     K                          + K+LHMFVWSSSASPVS+    VF
Sbjct: 329 -FSSTKNTKNQQQQEQQQPLQQQQQQQNQNNKTNHDAKELHMFVWSSSASPVSD----VF 383

Query: 260 RGGDYG-------NDFGG------VAHQKDNDE---------FGRDEFSFGNRPVTNGVD 297
            G D+G       +D G       VA    N E         F  ++FSF  +      +
Sbjct: 384 GGNDFGAAQQSGRSDQGAKEIRMLVADHPQNGETKAIAHAGDFPGEDFSFAGKGDGEDDE 443

Query: 298 RE--GPV-LSKLGSSSTAELHPKTGVDGEPKP---TAMPPASVMTRLILIMVWRKLIRNP 351
           RE  GP  L+KLGSSSTAELHPK  V G P+      MPPASVMTRLILIMVWRKLIRNP
Sbjct: 444 REKDGPTGLNKLGSSSTAELHPK--VVGAPETGVNKQMPPASVMTRLILIMVWRKLIRNP 501

Query: 352 NTYSSLIGLTWSLVSFKWNIVMPAIIARSISILSDAGLGMAMFSLGLFMALQPRIIACGN 411
           NTYSSLIGL WSL++F+W++ MPAII +SISILSDAGLGMAMFSLGLFMALQP+IIACGN
Sbjct: 502 NTYSSLIGLVWSLIAFRWDVAMPAIIKQSISILSDAGLGMAMFSLGLFMALQPKIIACGN 561

Query: 412 SIASFAMAVRFLTGPAVMAAASIAVGLRGVLLHVAIVQAALPQGIVPFVFAKEYNVHPDI 471
           S+A+FAMAVRFLTGPAVMAAASIAVGLRG LL +AIVQAALPQGIVPFVFAKEYNVHP I
Sbjct: 562 SVAAFAMAVRFLTGPAVMAAASIAVGLRGTLLRIAIVQAALPQGIVPFVFAKEYNVHPAI 621

Query: 472 LSTG 475
           LST 
Sbjct: 622 LSTA 625


>29662.m000472 Auxin efflux carrier component, putative
          Length = 635

 Score =  550 bits (1416), Expect = e-157,   Method: Compositional matrix adjust.
 Identities = 313/522 (59%), Positives = 368/522 (70%), Gaps = 49/522 (9%)

Query: 1   SLEWSITLFSLSTLPNTLVMGIPLLKGMYGDFSGSLMVQIVVLQCIIWYTLMLFLFEYRG 60
           SLEW ITLFSLSTLPNTLVMGIPLLK MYG+FSGSLMVQIVVLQ +IWYTLMLF+FEYRG
Sbjct: 97  SLEWMITLFSLSTLPNTLVMGIPLLKAMYGEFSGSLMVQIVVLQSVIWYTLMLFMFEYRG 156

Query: 61  ARILIGEQFPDTAGSIISFRVDSDIISLDGREPLQTEAELGEDGKLHVTVRKSTSSRSEI 120
           A++LI EQFP+TAGSI SFRVDSD++SL+GREPLQ +AE+G+DGKLHV V++ST+S    
Sbjct: 157 AKLLISEQFPETAGSITSFRVDSDVVSLNGREPLQADAEIGDDGKLHVVVKRSTASSMVS 216

Query: 121 FSRRSHGPNSGLSLTPRPSNLTNAEIYSLQSSRNPTPRGSSFNHTDFYSMVNGKNAS--- 177
              +S G NS  S+TPR SNLT  EIYS+QSSR PTPR SSFN TDFY+M   K AS   
Sbjct: 217 SFNKSQGLNSITSMTPRASNLTGVEIYSVQSSREPTPRASSFNQTDFYAMFASKAASPKH 276

Query: 178 ------------NVSPRQSNFGNLP----FDEENGGIGLFGNVSRANGGSA--------Y 213
                       +V   QS+ G  P    FDEE   + +  N  +  GG +        Y
Sbjct: 277 GYTNSFQGSGIGDVYSLQSSKGATPRTSNFDEEM-MLKINNNNGKKRGGRSMSGELFNGY 335

Query: 214 PAPPN---AGIFSPGVKKKANG--TDNGKDLHMFVWSSSASPVSEGGIH--VFRGG--DY 264
           P PPN   +G  S G++KK +G    N K+LHMFVWSSSASPVSEG +   V R    ++
Sbjct: 336 P-PPNPMFSGSTSGGMRKKESGGTMPNNKELHMFVWSSSASPVSEGNLRHAVNRAASIEF 394

Query: 265 GN-DFGGVAHQKDNDEFGR--DEFSFGNRPV--TNG-VDREGPVLSKLG-SSSTAELHPK 317
           G+ D    A  ++ +   R   + S    P    NG  DR+     K   + S      K
Sbjct: 395 GDIDSSKTAALQNENAASRALHQLSENMSPAGRMNGEKDRDMDDQKKFAPNGSPFSCQKK 454

Query: 318 TGVDGE----PKPTAMPPASVMTRLILIMVWRKLIRNPNTYSSLIGLTWSLVSFKWNIVM 373
             +D E     K   MPPASVMTRLI+IMVWRKLIRNPNTYSSL G+ WSL+S++W+I M
Sbjct: 455 MDMDMEGGDGSKKHQMPPASVMTRLIIIMVWRKLIRNPNTYSSLFGVVWSLISYRWSIQM 514

Query: 374 PAIIARSISILSDAGLGMAMFSLGLFMALQPRIIACGNSIASFAMAVRFLTGPAVMAAAS 433
           P+I++ SISILSDAGLGMAMFSLGLFMALQP+IIACG S+A+FAMAVRFLTGPAV+AA S
Sbjct: 515 PSIVSGSISILSDAGLGMAMFSLGLFMALQPKIIACGKSVATFAMAVRFLTGPAVIAATS 574

Query: 434 IAVGLRGVLLHVAIVQAALPQGIVPFVFAKEYNVHPDILSTG 475
           IA+GLRG LLHVAIVQAALPQGIVPFVFAKEYNVH DILST 
Sbjct: 575 IAIGLRGPLLHVAIVQAALPQGIVPFVFAKEYNVHADILSTA 616


>27985.m000882 Auxin efflux carrier component, putative
          Length = 544

 Score =  387 bits (994), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 236/486 (48%), Positives = 288/486 (59%), Gaps = 49/486 (10%)

Query: 2   LEWSITLFSLSTLPNTLVMGIPLLKGMYGDFSGSLMVQIVVLQCIIWYTLMLFLFEYRGA 61
           L+W ITLFS++TLPNTLVMGIPLL  MYGDF+ SLMVQ+VVLQCIIWYTL+LFLFEYR A
Sbjct: 96  LDWLITLFSVATLPNTLVMGIPLLMAMYGDFTQSLMVQVVVLQCIIWYTLLLFLFEYRAA 155

Query: 62  RILIGEQFPD-TAGSIISFRVDSDIISLDGREPLQTEAELGEDGKLHVTVRKSTSSRSEI 120
            +LI  QFP  TA SI    +D+D+ISLDGR+PL+TE+E   +G++ V +R+STSS    
Sbjct: 156 TLLIKTQFPGPTAASITKIELDTDVISLDGRDPLRTESETDGNGRIRVRIRRSTSS---- 211

Query: 121 FSRRSHGPNSGLS-----LTPRPSNLTNAEIYSLQSSRNPTPRGSSFNHTDFYSMVNGKN 175
                  P+S LS     LTPRPSNL+NAEI+S+ +   P P      H          N
Sbjct: 212 ------APDSALSISSINLTPRPSNLSNAEIFSVNT---PAPFHDYNIHNPNNIYNLYNN 262

Query: 176 ASNVSPRQSNF---GNLPFDEENGGIGLFGNVSRANGGSAYPAPPNAGIFSPGVKKKANG 232
               +         G+L F   +G        + ++  S  P P  +      V   A+ 
Sbjct: 263 NHGGTNNNEIIICNGDLGFGYRSGTSPRLSGYASSDAYSLQPTPRASNFNEMDVINAAST 322

Query: 233 ---TDNGKDLHMFVWSSSASPVSEGGIHVFRGGDYGNDFGGVAHQKDNDEFGRDEFSFGN 289
                +      F   S A P     + +  G   G    G A  KD  E    E SF +
Sbjct: 323 PYWVRSPVAGKFFRQPSPAVP----DVRMLWGESPGKGQNGGAGSKDITE---KEISFRD 375

Query: 290 RPVTNGVDREGPVLSKLGSSSTAELHPKTGVDGEPKPTAMPPASVMTRLILIMVWRKLIR 349
              T   D E                 +T          MP A VM RLILI+V RKL R
Sbjct: 376 SSKTPAADEE-----------------ETIAKDATNVQEMPGALVMIRLILIVVGRKLSR 418

Query: 350 NPNTYSSLIGLTWSLVSFKWNIVMPAIIARSISILSDAGLGMAMFSLGLFMALQPRIIAC 409
           NPNTYSS++GL WSL+SFKWN+ MP+++  SI I+SDAGLGMAMFSLGLFMALQPRIIAC
Sbjct: 419 NPNTYSSVLGLLWSLISFKWNVGMPSLVKNSIKIISDAGLGMAMFSLGLFMALQPRIIAC 478

Query: 410 GNSIASFAMAVRFLTGPAVMAAASIAVGLRGVLLHVAIVQAALPQGIVPFVFAKEYNVHP 469
           G   A+  MA+RF+ GP VM+AAS+AVGLRGV L  AIVQAALPQGIVPFVFA+EY +HP
Sbjct: 479 GKKKATIGMAIRFICGPVVMSAASVAVGLRGVRLRAAIVQAALPQGIVPFVFAREYGLHP 538

Query: 470 DILSTG 475
           DILSTG
Sbjct: 539 DILSTG 544


>29822.m003474 conserved hypothetical protein
          Length = 313

 Score =  174 bits (441), Expect = 9e-44,   Method: Compositional matrix adjust.
 Identities = 87/140 (62%), Positives = 115/140 (82%)

Query: 336 TRLILIMVWRKLIRNPNTYSSLIGLTWSLVSFKWNIVMPAIIARSISILSDAGLGMAMFS 395
           T +IL+ V +KL+RNPN +++L+GL W+ V F+W++ +P I+ +SI ILS  GLGMAMFS
Sbjct: 153 TMVILLTVGKKLLRNPNFHATLLGLIWASVHFRWDVKLPDIVDKSIRILSTGGLGMAMFS 212

Query: 396 LGLFMALQPRIIACGNSIASFAMAVRFLTGPAVMAAASIAVGLRGVLLHVAIVQAALPQG 455
           LGLFMA +P IIACG  +A  +M+++F++GPA+MA A++AV  RG +  VAIVQAALPQG
Sbjct: 213 LGLFMASRPNIIACGVRMAVLSMSMKFISGPAIMAVAALAVRARGTVFKVAIVQAALPQG 272

Query: 456 IVPFVFAKEYNVHPDILSTG 475
           IVPFVFAKEYN+HPDILSTG
Sbjct: 273 IVPFVFAKEYNIHPDILSTG 292



 Score = 62.0 bits (149), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 31/48 (64%), Positives = 37/48 (77%), Gaps = 1/48 (2%)

Query: 2   LEWSITLFSLSTLPNTLVMGIPLLKGMYGDFSGSLMVQIVVLQCIIWY 49
           L W IT  SLSTLPNTL++GIPLLK MYG  + +L  QIVVLQ ++WY
Sbjct: 55  LNWIITGLSLSTLPNTLILGIPLLKAMYGAEAEAL-SQIVVLQSLVWY 101


>30128.m009025 conserved hypothetical protein
          Length = 357

 Score =  148 bits (374), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 69/130 (53%), Positives = 95/130 (73%)

Query: 346 KLIRNPNTYSSLIGLTWSLVSFKWNIVMPAIIARSISILSDAGLGMAMFSLGLFMALQPR 405
           KL  NPN+Y+ ++GL W+ ++ +W+  MP+I+  SI I+S AG G AMFS+G+FMA+Q +
Sbjct: 205 KLAMNPNSYACILGLVWAFIANRWHFEMPSIMEGSILIMSKAGTGTAMFSMGIFMAVQEK 264

Query: 406 IIACGNSIASFAMAVRFLTGPAVMAAASIAVGLRGVLLHVAIVQAALPQGIVPFVFAKEY 465
           +IACG  +    M +RF+ GPA MA  SIAVGL G +L VAI+QAALPQ I  F+FAKEY
Sbjct: 265 VIACGAGLTVVGMILRFIAGPAAMAIGSIAVGLHGDVLRVAIIQAALPQSITSFIFAKEY 324

Query: 466 NVHPDILSTG 475
            +H ++LST 
Sbjct: 325 GLHAEVLSTA 334



 Score = 73.6 bits (179), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 35/63 (55%), Positives = 47/63 (74%)

Query: 1   SLEWSITLFSLSTLPNTLVMGIPLLKGMYGDFSGSLMVQIVVLQCIIWYTLMLFLFEYRG 60
           S  WSIT FSLSTL N+LV+G+PL+K MYG  +  L+VQ  V+Q IIW T++LF+ E+R 
Sbjct: 97  SYTWSITSFSLSTLTNSLVVGVPLMKAMYGPMAVDLVVQSSVVQAIIWLTILLFVLEFRR 156

Query: 61  ARI 63
            R+
Sbjct: 157 TRL 159


>29651.m000296 hypothetical protein
          Length = 97

 Score =  148 bits (374), Expect = 5e-36,   Method: Composition-based stats.
 Identities = 74/76 (97%), Positives = 75/76 (98%)

Query: 400 MALQPRIIACGNSIASFAMAVRFLTGPAVMAAASIAVGLRGVLLHVAIVQAALPQGIVPF 459
           MALQPRIIACGNSIA+FAMAVRFLTGPAVMAAASIAVGLRG LLHVAIVQAALPQGIVPF
Sbjct: 1   MALQPRIIACGNSIAAFAMAVRFLTGPAVMAAASIAVGLRGTLLHVAIVQAALPQGIVPF 60

Query: 460 VFAKEYNVHPDILSTG 475
           VFAKEYNVHPDILSTG
Sbjct: 61  VFAKEYNVHPDILSTG 76


>29804.m001502 hypothetical protein
          Length = 148

 Score =  129 bits (324), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 73/140 (52%), Positives = 90/140 (64%), Gaps = 25/140 (17%)

Query: 20  MGIPLLKGMYGDFSGSLMVQIVVLQCIIWYTLMLFLFEYRGARILIGEQFPDTAGSIISF 79
           MGIPLL  MY  +  SLMVQ                  YRGA++LI EQFP+TA SI+ F
Sbjct: 1   MGIPLLIVMYDKYVDSLMVQ------------------YRGAKMLIMEQFPETAASIVLF 42

Query: 80  RVDSDIISLDGREPLQTEAELGEDGKLHVTVRKSTSSRSEIFSRRSHGPNSGLSLTPRPS 139
           ++DSD++SLDGR+ L+T+A++G DGKLHV VRKS +      S+RS G  S   LT  PS
Sbjct: 43  KMDSDVVSLDGRDLLETDAKIGSDGKLHVAVRKSKA------SKRSLGHGSFFGLT-HPS 95

Query: 140 NLTNAEIYSLQSSRNPTPRG 159
           NLT AEIY L SS+NPT R 
Sbjct: 96  NLTGAEIYCLSSSQNPTLRA 115