Jatropha Genome Database
- JcCB0398801.10
BLASTP 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= JcCB0398801.10 + phase: 0
(172 letters)
Database: castor_wgs_0.1_aa
31,221 sequences; 10,419,776 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
29598.m000460 Auxin-responsive protein IAA16, putative 177 2e-45
29883.m001993 Auxin-induced protein AUX28, putative 161 1e-40
29844.m003174 Auxin-responsive protein IAA7, putative 130 2e-31
28179.m000461 transcription factor, putative 105 9e-24
29912.m005483 Auxin-responsive protein IAA27, putative 104 2e-23
29841.m002749 Auxin-responsive protein IAA1, putative 104 2e-23
30146.m003546 Auxin-responsive protein IAA27, putative 102 1e-22
30170.m013613 Auxin-responsive protein IAA19, putative 96 1e-20
29844.m003175 Auxin-responsive protein IAA4, putative 91 3e-19
29598.m000461 Auxin-induced protein 22D, putative 91 3e-19
29883.m001992 Auxin-induced protein 22E, putative 86 7e-18
29841.m002748 Auxin-induced protein AUX22, putative 74 5e-14
30146.m003502 Auxin-responsive protein IAA6, putative 60 5e-10
29637.m000735 Auxin-responsive protein IAA13, putative 59 1e-09
30008.m000799 Auxin-responsive protein IAA13, putative 59 1e-09
29794.m003410 conserved hypothetical protein 59 1e-09
29848.m004617 ATP binding protein, putative 54 4e-08
29927.m000601 hypothetical protein 53 7e-08
>29598.m000460 Auxin-responsive protein IAA16, putative
Length = 257
Score = 177 bits (449), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 107/184 (58%), Positives = 113/184 (61%), Gaps = 21/184 (11%)
Query: 2 SAEADKYVTINFXXXXXXXXXXXXXXXXXXXXXXXXDQIAKINNGKRGFSETVDLKLNLS 61
SAE DKY+ INF + AK+N GKRGFSETVDLKLNLS
Sbjct: 6 SAEPDKYMMINFEETELRLGLPGGSNVNDS-------EFAKVN-GKRGFSETVDLKLNLS 57
Query: 62 TXX------XXXXXXXXXXTDVPSS-NDPAKPPAKAQVVGWPPIRSFRKNVMSVQKSNGD 114
T VPSS NDPAKPPAKAQVVGWPPIRSFRKNVM+VQK++ D
Sbjct: 58 TKEPSGKDVIVGEETMKEKATVPSSSNDPAKPPAKAQVVGWPPIRSFRKNVMAVQKNSTD 117
Query: 115 EAEKXXXXXXXXX------XXXXFVKVSMDGAPYLRKVDLKLYKSYQELSDALGKMFSSF 168
E EK FVKVSMDGAPYLRKVDLKLYKSYQELSDALGKMFSSF
Sbjct: 118 EGEKGTATSAPAAAATSGSTSAAFVKVSMDGAPYLRKVDLKLYKSYQELSDALGKMFSSF 177
Query: 169 TIGN 172
TIGN
Sbjct: 178 TIGN 181
>29883.m001993 Auxin-induced protein AUX28, putative
Length = 244
Score = 161 bits (408), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 85/131 (64%), Positives = 98/131 (74%), Gaps = 12/131 (9%)
Query: 47 KRGFSETVDLKLNLSTXXXXXXXXXXXXT-----DVPSSNDPAKPPAKAQVVGWPPIRSF 101
KRGFSETVDLKLNLS+ T ++ S++DPAKPPAKAQVVGWPP+RSF
Sbjct: 45 KRGFSETVDLKLNLSSKEPGIDPNDNTKTISRENNLLSADDPAKPPAKAQVVGWPPVRSF 104
Query: 102 RKNVMSVQKSNGDEAEKXXXXXXXXXXXXXFVKVSMDGAPYLRKVDLKLYKSYQELSDAL 161
RK++++VQKS+ +E EK FVKVSMDGAPYLRKVDLK+YKSYQELSDAL
Sbjct: 105 RKHMLTVQKSSNEETEKLGLNPT-------FVKVSMDGAPYLRKVDLKMYKSYQELSDAL 157
Query: 162 GKMFSSFTIGN 172
GKMFSSFTIGN
Sbjct: 158 GKMFSSFTIGN 168
>29844.m003174 Auxin-responsive protein IAA7, putative
Length = 181
Score = 130 bits (328), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 66/97 (68%), Positives = 76/97 (78%), Gaps = 10/97 (10%)
Query: 77 VPSS-NDPAKPPAKAQVVGWPPIRSFRKNVMSVQKSNGDEAEKXXXXXXXXXXXXXFVKV 135
+P+S DPAKPPAKAQVVGWPP+RS+RKN+M+ QK+ +E EK FVKV
Sbjct: 18 LPASIKDPAKPPAKAQVVGWPPVRSYRKNIMA-QKNTSEEGEKASSAA--------FVKV 68
Query: 136 SMDGAPYLRKVDLKLYKSYQELSDALGKMFSSFTIGN 172
MDGAPYLRKVDLK+YKSYQELSDAL KMFSSFT+GN
Sbjct: 69 CMDGAPYLRKVDLKMYKSYQELSDALAKMFSSFTMGN 105
>28179.m000461 transcription factor, putative
Length = 382
Score = 105 bits (263), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 53/94 (56%), Positives = 63/94 (67%), Gaps = 6/94 (6%)
Query: 79 SSNDPAKPPAKAQVVGWPPIRSFRKNVMSVQKSNGDEAEKXXXXXXXXXXXXXFVKVSMD 138
S++ + P AKAQVVGWPPI+SFRKN ++ N DE + FVKVSMD
Sbjct: 217 SNHSGSAPAAKAQVVGWPPIKSFRKNTLATTSKNNDEVD------GKPGPGTLFVKVSMD 270
Query: 139 GAPYLRKVDLKLYKSYQELSDALGKMFSSFTIGN 172
GAPYLRKVDL+ + +YQELS AL KMFS FTIG
Sbjct: 271 GAPYLRKVDLRTHSTYQELSRALEKMFSCFTIGQ 304
>29912.m005483 Auxin-responsive protein IAA27, putative
Length = 297
Score = 104 bits (259), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 54/88 (61%), Positives = 60/88 (68%), Gaps = 8/88 (9%)
Query: 86 PPAKAQVVGWPPIRSFRKNVMSVQ--KSNGDEAEKXXXXXXXXXXXXXFVKVSMDGAPYL 143
P +KAQVVGWPPIRSFRKN M Q K++ D+AE ++KVSMDGAPYL
Sbjct: 137 PASKAQVVGWPPIRSFRKNTMGSQPPKNDDDDAE------AKTGSGCLYIKVSMDGAPYL 190
Query: 144 RKVDLKLYKSYQELSDALGKMFSSFTIG 171
RKVDLK Y SY ELS L KMFS FTIG
Sbjct: 191 RKVDLKTYSSYMELSSGLEKMFSCFTIG 218
>29841.m002749 Auxin-responsive protein IAA1, putative
Length = 217
Score = 104 bits (259), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 63/136 (46%), Positives = 76/136 (55%), Gaps = 25/136 (18%)
Query: 38 DQIAKINNGKRGFSETVDLKLNLSTXXXXXXXXXXXXTDVPSSNDPAKPP-AKAQVVGWP 96
D AKI KRG+ +TVDL L + DV S+ P KPP +KAQVVGWP
Sbjct: 37 DNGAKIGT-KRGYLQTVDLNLGSCSSDCGNKDCNMPENDVSSA--PKKPPVSKAQVVGWP 93
Query: 97 PIRSFRKNVMSVQKSNGDEAEKXXXXXXXXXXXXXFVKVSMDGAPYLRKVDLKLYKSYQE 156
P+R++RKN M K FVKV++DGAPYLRKVDL++Y SYQ+
Sbjct: 94 PVRAYRKNAMKSSK---------------------FVKVAVDGAPYLRKVDLEMYNSYQQ 132
Query: 157 LSDALGKMFSSFTIGN 172
L AL MFS FTI N
Sbjct: 133 LLTALEDMFSCFTIRN 148
>30146.m003546 Auxin-responsive protein IAA27, putative
Length = 373
Score = 102 bits (254), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 55/88 (62%), Positives = 59/88 (67%), Gaps = 9/88 (10%)
Query: 86 PPAKAQVVGWPPIRSFRKNVMS--VQKSNGDEAEKXXXXXXXXXXXXXFVKVSMDGAPYL 143
P AKAQVVGWPPIRSFRKN M+ V K+N D K +VKVSMDGAPYL
Sbjct: 214 PAAKAQVVGWPPIRSFRKNTMASNVAKNNEDAEGKSGSGCL-------YVKVSMDGAPYL 266
Query: 144 RKVDLKLYKSYQELSDALGKMFSSFTIG 171
RKVDLK Y +Y ELS L KMFS FTIG
Sbjct: 267 RKVDLKTYSNYVELSSGLEKMFSCFTIG 294
>30170.m013613 Auxin-responsive protein IAA19, putative
Length = 374
Score = 95.5 bits (236), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 48/83 (57%), Positives = 55/83 (66%), Gaps = 6/83 (7%)
Query: 89 KAQVVGWPPIRSFRKNVMSVQKSNGDEAEKXXXXXXXXXXXXXFVKVSMDGAPYLRKVDL 148
KAQVVGWPP+R FRKN ++ +E + FVKVSMDGAPYLRKVDL
Sbjct: 207 KAQVVGWPPVRLFRKNSLATASKKTEEVD------GKAGPGALFVKVSMDGAPYLRKVDL 260
Query: 149 KLYKSYQELSDALGKMFSSFTIG 171
+ Y +YQELS AL KMFS FTIG
Sbjct: 261 RNYSAYQELSSALEKMFSCFTIG 283
>29844.m003175 Auxin-responsive protein IAA4, putative
Length = 191
Score = 90.9 bits (224), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 44/86 (51%), Positives = 58/86 (67%), Gaps = 14/86 (16%)
Query: 86 PPAKAQVVGWPPIRSFRKNVMSVQKSNGDEAEKXXXXXXXXXXXXXFVKVSMDGAPYLRK 145
PP KAQ+VGWPP+RS+RKN + +++ + + + +VKVSMDGAPYLRK
Sbjct: 63 PPPKAQIVGWPPVRSYRKNNLQTKQTEAESSGR-------------YVKVSMDGAPYLRK 109
Query: 146 VDLKLYKSYQELSDALGKMFSSFTIG 171
+DLK+YK Y+EL AL MF FTIG
Sbjct: 110 IDLKVYKGYKELLKALQSMF-KFTIG 134
>29598.m000461 Auxin-induced protein 22D, putative
Length = 200
Score = 90.5 bits (223), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 45/86 (52%), Positives = 54/86 (62%), Gaps = 12/86 (13%)
Query: 86 PPAKAQVVGWPPIRSFRKNVMSVQKSNGDEAEKXXXXXXXXXXXXXFVKVSMDGAPYLRK 145
PP KAQVVGWPP+RS+RKN +K+ + A +VKVSMDGAPYLRK
Sbjct: 70 PPTKAQVVGWPPVRSYRKNCFQARKTEAEAA-----------GNGIYVKVSMDGAPYLRK 118
Query: 146 VDLKLYKSYQELSDALGKMFSSFTIG 171
+DLK+YK Y EL AL MF F +G
Sbjct: 119 IDLKVYKCYTELFQALEDMF-KFKVG 143
>29883.m001992 Auxin-induced protein 22E, putative
Length = 196
Score = 86.3 bits (212), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 44/89 (49%), Positives = 55/89 (61%), Gaps = 13/89 (14%)
Query: 77 VPSSNDPAKPPAKAQVVGWPPIRSFRKNVMSVQKSNGDEAEKXXXXXXXXXXXXXFVKVS 136
V + + PAKAQVVGWPPIRS+RKN ++S G+ A +VKVS
Sbjct: 60 VENDEEHCASPAKAQVVGWPPIRSYRKNYFQTKQSEGEGA-------------GMYVKVS 106
Query: 137 MDGAPYLRKVDLKLYKSYQELSDALGKMF 165
+DGAPYLRK+D+K+Y SY EL AL MF
Sbjct: 107 VDGAPYLRKIDIKVYNSYPELLKALENMF 135
>29841.m002748 Auxin-induced protein AUX22, putative
Length = 194
Score = 73.6 bits (179), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 39/87 (44%), Positives = 53/87 (60%), Gaps = 13/87 (14%)
Query: 85 KPPAKAQVVGWPPIRSFRKNVMSVQKSNGDEAEKXXXXXXXXXXXXXFVKVSMDGAPYLR 144
K P K+QVVGWPP+ S+RK +++ +E E+ +VKVSMDGAP+LR
Sbjct: 53 KIPTKSQVVGWPPVCSYRK------RNSFNEKERLETSKL-------YVKVSMDGAPFLR 99
Query: 145 KVDLKLYKSYQELSDALGKMFSSFTIG 171
K+DL +K Y +L AL K+F F IG
Sbjct: 100 KIDLGTHKEYSDLVLALEKLFGCFGIG 126
>30146.m003502 Auxin-responsive protein IAA6, putative
Length = 320
Score = 60.1 bits (144), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 40/99 (40%), Positives = 50/99 (50%), Gaps = 10/99 (10%)
Query: 75 TDVPSSNDPAKPPAKAQVVGWPPIRSFRKNVMSVQKSNGDEAEK--------XXXXXXXX 126
T VP N K A VVGWPPIRSFRKN+ S S +
Sbjct: 149 TAVP--NISQKRTAPGPVVGWPPIRSFRKNLASSNSSKSAADSQNESPNKKVASENPVET 206
Query: 127 XXXXXFVKVSMDGAPYLRKVDLKLYKSYQELSDALGKMF 165
FVK++MDG P RKVDL+ Y SY++LS A+ ++F
Sbjct: 207 CKKGLFVKINMDGVPIGRKVDLQAYDSYEKLSIAVDELF 245
>29637.m000735 Auxin-responsive protein IAA13, putative
Length = 300
Score = 58.9 bits (141), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 39/105 (37%), Positives = 46/105 (43%), Gaps = 23/105 (21%)
Query: 84 AKPP--AKAQVVGWPPIRSFRKNVMSVQ----------------KSNGDEAEKX-----X 120
A PP A +QVVGWPPIR++R N M Q K N EK
Sbjct: 116 AAPPNAASSQVVGWPPIRAYRMNSMVNQAKSMAADEFNSVVGGNKGNNTLVEKTKNGSNM 175
Query: 121 XXXXXXXXXXXFVKVSMDGAPYLRKVDLKLYKSYQELSDALGKMF 165
FVKV+MDG P RKVDL + Y+ L+ L MF
Sbjct: 176 NNSISKARTSLFVKVNMDGIPIGRKVDLSAHGCYEALAQTLEDMF 220
>30008.m000799 Auxin-responsive protein IAA13, putative
Length = 318
Score = 58.5 bits (140), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/106 (33%), Positives = 50/106 (47%), Gaps = 20/106 (18%)
Query: 80 SNDPAKPPAKAQVVGWPPIRSFRKNVMSVQ-KSNGDEAEKX------------------- 119
S++ P A +Q+VGWPP+R++R N + Q K++ E +K
Sbjct: 127 SHEGGSPTAASQIVGWPPVRTYRINSLVNQAKASRSEEDKSVVEQDKSKDASKKICNGSK 186
Query: 120 XXXXXXXXXXXXFVKVSMDGAPYLRKVDLKLYKSYQELSDALGKMF 165
FVKV+MDG P RKVDL + SY+ L+ L MF
Sbjct: 187 TNATNNEKGHLGFVKVNMDGIPIGRKVDLNAHASYETLAQTLEDMF 232
>29794.m003410 conserved hypothetical protein
Length = 367
Score = 58.5 bits (140), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/95 (36%), Positives = 52/95 (54%), Gaps = 6/95 (6%)
Query: 80 SNDPAKPPAKAQVVGWPPIRSFRKNVMSVQKSN--GDEAEKXXXX----XXXXXXXXXFV 133
S++ P+ A +VGWPPIRSFRK++ S S D +K FV
Sbjct: 167 SHESRVAPSAAPLVGWPPIRSFRKHLGSSNNSKLASDLPDKNPTGGFNLKPESFRNGLFV 226
Query: 134 KVSMDGAPYLRKVDLKLYKSYQELSDALGKMFSSF 168
K++M+G P RK++L Y SY++LS A+ ++FS
Sbjct: 227 KINMEGIPIGRKINLNAYDSYEKLSIAIDELFSGL 261
>29848.m004617 ATP binding protein, putative
Length = 895
Score = 53.9 bits (128), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 46/95 (48%), Gaps = 10/95 (10%)
Query: 81 NDPAKPPAKAQVVGWPPIRSFRKNVMSVQKSNGDEAEKXXXXXXXXX----------XXX 130
ND + QVVGWPPI+S+RK ++ Q+ G K
Sbjct: 87 NDGVVAEEEEQVVGWPPIKSWRKKLLHDQQHGGRPTVKNRVAAAASAGNENNQMNGGSNY 146
Query: 131 XFVKVSMDGAPYLRKVDLKLYKSYQELSDALGKMF 165
+VKV M+G RK+DL+L+ SYQ L++ L MF
Sbjct: 147 KYVKVKMEGVAIARKIDLRLFHSYQTLTNFLISMF 181
>29927.m000601 hypothetical protein
Length = 250
Score = 53.1 bits (126), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 44/89 (49%), Gaps = 7/89 (7%)
Query: 79 SSNDPAKPPAKAQVVGWPPIRSFRKNVMSVQKSNGDEAEKXXXXXXXXXXXXXFVKVSMD 138
+SN + + +VGWPPI+ RK + ++ + A+ +VKV MD
Sbjct: 120 ASNKIEEEDSDCGIVGWPPIKYRRKKIRGIRAVDNGCAD-------CHGRPSSYVKVKMD 172
Query: 139 GAPYLRKVDLKLYKSYQELSDALGKMFSS 167
G RK+D LY S+Q+L D L MF +
Sbjct: 173 GVAIARKIDPSLYTSFQDLKDTLLLMFGT 201