Jatropha Genome Database

JcCB0397691.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0397691.10 - phase: 1 /partial
         (232 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

30170.m014359 starch branching enzyme II, putative                    436   e-123
27496.m000095 starch branching enzyme II, putative                    286   5e-78
29762.m000486 1,4-alpha-glucan branching enzyme, putative             164   4e-41

>30170.m014359 starch branching enzyme II, putative
          Length = 914

 Score =  436 bits (1120), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 208/235 (88%), Positives = 218/235 (92%), Gaps = 4/235 (1%)

Query: 2   HGIYWEFN----EYFSEATYVDAVVYLMLANSLIHNTLPDATVIAEDVSGMPGLGHDVSE 57
           HGI   F+    EYFSEAT VDAVVYLMLANSLIHN LPDATVIAEDVSGMPGL   VSE
Sbjct: 481 HGINMGFSGNYIEYFSEATDVDAVVYLMLANSLIHNLLPDATVIAEDVSGMPGLSCSVSE 540

Query: 58  GGIGFDYRLAMAIPDKWIDYLKNKSDEEWSMEEIAWSLTNRRYTEKCVAYAESHDQAIVG 117
           GGIGFDYRLAMAIPDKWIDYLKNK+DEEWSM +I+WSLTNRRYTEKCVAYAESHDQAIVG
Sbjct: 541 GGIGFDYRLAMAIPDKWIDYLKNKTDEEWSMGDISWSLTNRRYTEKCVAYAESHDQAIVG 600

Query: 118 DKTVAFLLMDKEMYSGMSCLTDAPPIIERGIALHKMVHFLTMALGGEGYLNFMGNEFGHP 177
           DKT+AFLLMD EMYSGMSCLTDAPP +ERGIALHKM+H LTMALGGEGYLNFMGNEFGHP
Sbjct: 601 DKTIAFLLMDTEMYSGMSCLTDAPPTVERGIALHKMIHLLTMALGGEGYLNFMGNEFGHP 660

Query: 178 EWIDFPREGNGWSYDKCRRQWNLVDTEHLRYKFMNAFDRAMNGLDEKYSFLASTK 232
           EWIDFPREGNGWSYDKCRRQWNLVDTEHLRYKFMNAFD+AMN LDEK+SFL+STK
Sbjct: 661 EWIDFPREGNGWSYDKCRRQWNLVDTEHLRYKFMNAFDKAMNLLDEKHSFLSSTK 715


>27496.m000095 starch branching enzyme II, putative
          Length = 863

 Score =  286 bits (733), Expect = 5e-78,   Method: Compositional matrix adjust.
 Identities = 142/234 (60%), Positives = 170/234 (72%), Gaps = 12/234 (5%)

Query: 8   FNEYFSEATYVDAVVYLMLANSLIHNTLPDATVIAEDVSGMPGLGHDVSEGGIGFDYRLA 67
           +NEYF  AT VDAVVYLML N +IH   P+A  I EDVSGMP     V +GG+GF+YRL 
Sbjct: 506 YNEYFGFATDVDAVVYLMLVNDMIHGLFPEAVTIGEDVSGMPTFCIPVEDGGVGFNYRLH 565

Query: 68  MAIPDKWIDYLKNKSDEEWSMEEIAWSLTNRRYTEKCVAYAESHDQAIVGDKTVAFLLMD 127
           MAI DKWI+ L+ K DE+W M +I  +LTNRR+ E CVAYAESHDQA+VGDKT+AF LMD
Sbjct: 566 MAIADKWIELLQLK-DEDWKMGDIVHTLTNRRWMENCVAYAESHDQALVGDKTIAFWLMD 624

Query: 128 KEMYSGMSCLTDAPPIIERGIALHKMVHFLTMALGGEGYLNFMGNEFGHPEWIDFPR--- 184
           K+MY  MS    + P+I+RGIALHKM+   TM LGGEGYLNFMGNEFGHPEWIDFPR   
Sbjct: 625 KDMYDFMSLDRPSTPLIDRGIALHKMIRLATMGLGGEGYLNFMGNEFGHPEWIDFPRGDQ 684

Query: 185 --------EGNGWSYDKCRRQWNLVDTEHLRYKFMNAFDRAMNGLDEKYSFLAS 230
                    GN +SYDKCRR+++L D ++LRY  M  FD+AM  L+E Y F+ S
Sbjct: 685 HLPSGKIIPGNNFSYDKCRRRFDLGDADYLRYHGMQEFDQAMQHLEEAYGFMTS 738


>29762.m000486 1,4-alpha-glucan branching enzyme, putative
          Length = 894

 Score =  164 bits (414), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 84/226 (37%), Positives = 137/226 (60%), Gaps = 6/226 (2%)

Query: 7   EFNEYFSEATYVDAVVYLMLANSLIHNTLPDATVIAEDVSGMPGLGHDVSEGGIGFDYRL 66
           +  EY ++    DA++YL+LAN L+H   P+   IAED +  PGL    S+GG+GFDY +
Sbjct: 577 DLEEYCNQYVDRDALLYLILANELLHTIHPNIITIAEDATYYPGLCDPTSQGGLGFDYYV 636

Query: 67  AMAIPDKWIDYLKNKSDEEWSMEEIAWSLT-NRRYTEKCVAYAESHDQAIVGDKTVAFLL 125
            ++  + W  +LKN  D EWSM +I  +L  N++  +K + YAE+H+Q+I G ++ A ++
Sbjct: 637 NVSASEMWSSFLKNIPDSEWSMSKIVSTLMGNKQNADKMLLYAENHNQSISGGQSFAEVM 696

Query: 126 MDKEMYSGMSCLTDAPPIIERGIALHKMVHFLTMALGGEGYLNFMGNEFGHPEWIDFPRE 185
             +  +   +  +  P  + RG  LHKM+  +T  +GG  YLNFMGNEFGHP+ ++FP  
Sbjct: 697 FGE--FKDHTPASKEP--LLRGCGLHKMIRMITFTIGGFAYLNFMGNEFGHPKRVEFPMA 752

Query: 186 GNGWSYDKCRRQWNLVDTEHLRYKFMNAFDRAMNGLDEKYSFLAST 231
            N +SY    R W+L++ E + ++ + +FD+ +  LDE    L+ +
Sbjct: 753 SNNFSYSLANRCWDLLENEDV-HRHLFSFDKDLMNLDENQKLLSRS 797