Jatropha Genome Database

JcCB0393011.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0393011.10 + phase: 0 
         (67 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29729.m002380 conserved hypothetical protein                          130   1e-31

>29729.m002380 conserved hypothetical protein
          Length = 593

 Score =  130 bits (328), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 59/67 (88%), Positives = 61/67 (91%)

Query: 1   MQLHCDHGLQGFQWNTIFGFQHQETSENYTRIGKADSSERELAVRAAAASIYSTCSFLMS 60
           MQLHCD GLQ F WN +FGFQ QETSENYTRIGKADS+ERELAVRAAAASIYSTCS LMS
Sbjct: 527 MQLHCDQGLQNFLWNPMFGFQQQETSENYTRIGKADSTERELAVRAAAASIYSTCSLLMS 586

Query: 61  KENVSCF 67
           KENVSCF
Sbjct: 587 KENVSCF 593