Jatropha Genome Database

JcCB0389841.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0389841.10 + phase: 2 /partial
         (324 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

30150.m000471 malate dehydrogenase, putative                          525   e-149
29900.m001590 malate dehydrogenase, putative                          488   e-138
30099.m001624 malate dehydrogenase, putative                          373   e-104
28830.m000233 malate dehydrogenase, putative                          362   e-100
30138.m004069 malate dehydrogenase, putative                          344   3e-95
29636.m000768 l-lactate dehydrogenase, putative                        53   2e-07
29200.m000165 malate dehydrogenase, putative                           49   2e-06
29636.m000769 l-lactate dehydrogenase, putative                        48   7e-06

>30150.m000471 malate dehydrogenase, putative
          Length = 345

 Score =  525 bits (1353), Expect = e-149,   Method: Compositional matrix adjust.
 Identities = 262/300 (87%), Positives = 269/300 (89%)

Query: 25  MRSSLFRSVKXXXXXXXXXXXXRRGYGSEAVPDRKVAVLGAAGGIGQPLALLMKLNPLVS 84
           MRSSLFRSVK            RRGY SEAVPDRKVAVLGAAGGIGQPLALLMKLNPLVS
Sbjct: 1   MRSSLFRSVKALGSTSSSSHLLRRGYASEAVPDRKVAVLGAAGGIGQPLALLMKLNPLVS 60

Query: 85  NLALYDIANTPGVAADVSHINTRSEVKGYVGEDQLGQALEGSDVVIIPAGVPRKPGMTRD 144
           NLALYDIANTPGVAADVSHINTRS+VKGYVGEDQLG+ALEGSDVVIIPAGVPRKPGMTRD
Sbjct: 61  NLALYDIANTPGVAADVSHINTRSDVKGYVGEDQLGKALEGSDVVIIPAGVPRKPGMTRD 120

Query: 145 DLFNINAGIVKGLCQAISKYCPNALVNMISNPVNSTVPIAAEVFKKAGTYDEKRLFGVTT 204
           DLFNINAGIVKGLC+AI+KYCPNALVNMISNPVNSTVPIAAEVFKKAGTYDEKRLFGVTT
Sbjct: 121 DLFNINAGIVKGLCEAIAKYCPNALVNMISNPVNSTVPIAAEVFKKAGTYDEKRLFGVTT 180

Query: 205 LDVVRAKTFYAGXXXXXXXXXXXXXXGGHAGITILPLFSQATPKANLSSEDIEALTKRTQ 264
           LDVVRAKTFYAG              GGHAGITILPL SQATPKANL  E+I ALTKRTQ
Sbjct: 181 LDVVRAKTFYAGKAKVPVAEVNVPVVGGHAGITILPLLSQATPKANLPDEEIVALTKRTQ 240

Query: 265 DGGTEVVEAKAGKGSATLSMAYAGAIFADACLKGLNGVPDVVECTFVQSSVTELPFFASK 324
           DGGTEVVEAKAGKGSATLSMAYAGAIFADACLKGLNGVPDVVEC+FVQS+VTELPFFASK
Sbjct: 241 DGGTEVVEAKAGKGSATLSMAYAGAIFADACLKGLNGVPDVVECSFVQSTVTELPFFASK 300


>29900.m001590 malate dehydrogenase, putative
          Length = 343

 Score =  488 bits (1256), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 239/297 (80%), Positives = 259/297 (87%), Gaps = 1/297 (0%)

Query: 29  LFRSVKXXXXXXXXXXXXRRGYGSEAVPDRKVAVLGAAGGIGQPLALLMKLNPLVSNLAL 88
           + RS +             R Y SE+ P+RKVA+LGAAGGIGQPLALLMKLNPLVS+L+L
Sbjct: 1   MLRSAQATLRSCTSRRLSARSYSSESQPERKVAILGAAGGIGQPLALLMKLNPLVSSLSL 60

Query: 89  YDIANTPGVAADVSHINTRSEVKGYVGEDQLGQALEGSDVVIIPAGVPRKPGMTRDDLFN 148
           YDIANTPGVAADVSHIN+R++V GY GE+QLGQALEGSD+VIIPAGVPRKPGMTRDDLFN
Sbjct: 61  YDIANTPGVAADVSHINSRAQVSGYAGEEQLGQALEGSDIVIIPAGVPRKPGMTRDDLFN 120

Query: 149 INAGIVKGLCQAISKYCPNALVNMISNPVNSTVPIAAEVFKKAGTYDEKRLFGVTTLDVV 208
           INAGIVK LC AI+KYCPNALVNMISNPVNSTVPIAAEVFKKAGTYDEK+LFGVTTLDVV
Sbjct: 121 INAGIVKSLCTAIAKYCPNALVNMISNPVNSTVPIAAEVFKKAGTYDEKKLFGVTTLDVV 180

Query: 209 RAKTFYAGXXXXXXXXXXXXXXGGHAGITILPLFSQATPKAN-LSSEDIEALTKRTQDGG 267
           RAKTFY G              GGHAGITILPLFSQATPK+N LS+EDI+ALTKRTQDGG
Sbjct: 181 RAKTFYGGKAKVAVAEVDVPVVGGHAGITILPLFSQATPKSNGLSNEDIKALTKRTQDGG 240

Query: 268 TEVVEAKAGKGSATLSMAYAGAIFADACLKGLNGVPDVVECTFVQSSVTELPFFASK 324
           TEVVEAKAGKGSATLSMAYAGA+FADACLKGLNGVPD+VEC+FVQSSVTELPFFASK
Sbjct: 241 TEVVEAKAGKGSATLSMAYAGAVFADACLKGLNGVPDIVECSFVQSSVTELPFFASK 297


>30099.m001624 malate dehydrogenase, putative
          Length = 356

 Score =  373 bits (958), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 184/269 (68%), Positives = 212/269 (78%)

Query: 56  PDRKVAVLGAAGGIGQPLALLMKLNPLVSNLALYDIANTPGVAADVSHINTRSEVKGYVG 115
           P  KVA+LGAAGGIGQPLA+LMK+NPLVS L LYD+ N PGV AD+SH++T + V+G++G
Sbjct: 43  PGFKVAILGAAGGIGQPLAMLMKMNPLVSVLHLYDVVNAPGVTADISHMDTGAVVRGFLG 102

Query: 116 EDQLGQALEGSDVVIIPAGVPRKPGMTRDDLFNINAGIVKGLCQAISKYCPNALVNMISN 175
           + QL  AL G D+V+IPAGVPRKPGMTRDDLFNINAGIV+ LC+ I+K CP A+VN+ISN
Sbjct: 103 QPQLENALTGMDLVVIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPRAIVNLISN 162

Query: 176 PVNSTVPIAAEVFKKAGTYDEKRLFGVTTLDVVRAKTFYAGXXXXXXXXXXXXXXGGHAG 235
           PVNSTVPIAAEVFKKAGTYD KRL GVT LDVVRA TF A               GGHAG
Sbjct: 163 PVNSTVPIAAEVFKKAGTYDPKRLLGVTMLDVVRANTFVAEVLGLDPREVDVPVVGGHAG 222

Query: 236 ITILPLFSQATPKANLSSEDIEALTKRTQDGGTEVVEAKAGKGSATLSMAYAGAIFADAC 295
           +TILPL SQ  P  + +SE+ E LTKR QDGGTEVV+AKAG GSATLSMAYA   FADAC
Sbjct: 223 VTILPLLSQVKPPCSFTSEETEYLTKRIQDGGTEVVQAKAGAGSATLSMAYAAVKFADAC 282

Query: 296 LKGLNGVPDVVECTFVQSSVTELPFFASK 324
           L+GL G   +VEC+FV S VTELPFFA+K
Sbjct: 283 LRGLRGDAGIVECSFVASQVTELPFFATK 311


>28830.m000233 malate dehydrogenase, putative
          Length = 332

 Score =  362 bits (928), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 176/266 (66%), Positives = 209/266 (78%)

Query: 59  KVAVLGAAGGIGQPLALLMKLNPLVSNLALYDIANTPGVAADVSHINTRSEVKGYVGEDQ 118
           KVA+LGAAGGIGQPLA+LMK+NPLVS L LYD+ NTPGV AD+SH++T + V+G++G+ Q
Sbjct: 22  KVAILGAAGGIGQPLAMLMKMNPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQQQ 81

Query: 119 LGQALEGSDVVIIPAGVPRKPGMTRDDLFNINAGIVKGLCQAISKYCPNALVNMISNPVN 178
           L  AL G D+VIIPAGVPRKPGMTRDDLFNINAGIV+ LC+ I+K CP A+VN+ISNPVN
Sbjct: 82  LEDALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRSLCEGIAKCCPRAIVNIISNPVN 141

Query: 179 STVPIAAEVFKKAGTYDEKRLFGVTTLDVVRAKTFYAGXXXXXXXXXXXXXXGGHAGITI 238
           STVPIA EVFKK+GT+D KR+ GVT LDVVRA TF A               GGHAG+TI
Sbjct: 142 STVPIAVEVFKKSGTFDPKRVLGVTMLDVVRANTFVAEVLGLDPREVDVPVVGGHAGVTI 201

Query: 239 LPLFSQATPKANLSSEDIEALTKRTQDGGTEVVEAKAGKGSATLSMAYAGAIFADACLKG 298
           LPL SQ  P  + + ++I+ LT R Q+GGTEVVEAKAG GSATLSMAYA   FADACL+G
Sbjct: 202 LPLLSQVKPPCSFTQKEIDYLTDRIQNGGTEVVEAKAGTGSATLSMAYAAVKFADACLRG 261

Query: 299 LNGVPDVVECTFVQSSVTELPFFASK 324
           + G   V++C +V S VTELPFFASK
Sbjct: 262 MRGDAGVIQCAYVASEVTELPFFASK 287


>30138.m004069 malate dehydrogenase, putative
          Length = 412

 Score =  344 bits (882), Expect = 3e-95,   Method: Compositional matrix adjust.
 Identities = 177/308 (57%), Positives = 212/308 (68%), Gaps = 5/308 (1%)

Query: 22  NVEMRSSLF-----RSVKXXXXXXXXXXXXRRGYGSEAVPDRKVAVLGAAGGIGQPLALL 76
           N E  SS F      +++            R  Y        KVA+LGAAGGIGQPLALL
Sbjct: 53  NFESESSFFGKESTMALRGSFATKAHKSSQRSQYQLNLQASYKVAILGAAGGIGQPLALL 112

Query: 77  MKLNPLVSNLALYDIANTPGVAADVSHINTRSEVKGYVGEDQLGQALEGSDVVIIPAGVP 136
           +K++PLVS L LYDIAN  GVAAD+SH NT S+V  + G  +L   L+G D+V+IPAGVP
Sbjct: 113 VKMSPLVSALHLYDIANVKGVAADLSHCNTPSQVLDFTGAAELANCLKGVDIVVIPAGVP 172

Query: 137 RKPGMTRDDLFNINAGIVKGLCQAISKYCPNALVNMISNPVNSTVPIAAEVFKKAGTYDE 196
           RKPGMTRDDLFNINA IVK L +A++  CP+A +++ISNPVNSTVPIAAEV K  G YD 
Sbjct: 173 RKPGMTRDDLFNINANIVKTLVEAVADNCPDAFIHIISNPVNSTVPIAAEVLKLKGVYDP 232

Query: 197 KRLFGVTTLDVVRAKTFYAGXXXXXXXXXXXXXXGGHAGITILPLFSQATPKANLSSEDI 256
           K+LFGVTTLDVVRA TF A               GGHAGITILPL S+  P A+ + E+ 
Sbjct: 233 KKLFGVTTLDVVRANTFVAQKKNLKLIDVDVPVVGGHAGITILPLLSKTKPSASFTDEET 292

Query: 257 EALTKRTQDGGTEVVEAKAGKGSATLSMAYAGAIFADACLKGLNGVPDVVECTFVQSSVT 316
           + LT R Q+ GTEVVEAKAG GSATLSMAYA A F ++ L+ L+G  DV EC+FVQS +T
Sbjct: 293 QELTVRIQNAGTEVVEAKAGAGSATLSMAYAAARFVESSLRALDGDSDVYECSFVQSDLT 352

Query: 317 ELPFFASK 324
           ELPFFAS+
Sbjct: 353 ELPFFASR 360


>29636.m000768 l-lactate dehydrogenase, putative
          Length = 350

 Score = 53.1 bits (126), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 61/255 (23%), Positives = 103/255 (40%), Gaps = 27/255 (10%)

Query: 59  KVAVLGAAGGIGQPLALLMKLNPLVSNLALYDIA--NTPGVAADVSHINTRSEVKGYVGE 116
           K++V+G  G +G  +A  +    L   LAL D+      G   D+ H          +  
Sbjct: 39  KISVIGT-GNVGMAIAQTILTQDLADELALVDVNPNKLRGEMLDLQHAAAFLPRTKILAS 97

Query: 117 DQLGQALEGSDVVIIPAGVPRKPGMTRDDLFNINAGIVKGLCQAISKYCPNALVNMISNP 176
                 + GSD+ I+ AG  + PG +R +L   N  + K +   ++KY P++++ ++SNP
Sbjct: 98  PDYSVTI-GSDLCIVTAGARQIPGESRLNLLQRNVTLFKNIIPPLAKYSPDSILMIVSNP 156

Query: 177 VNSTVPIAAEVFKKAGTYDEKRLFGV-TTLDVVRAKTFYAGXXXXXXXXXXXXXXGGH-- 233
           V+    IA   +K +G +   R+ G  T LD  R +   A               G H  
Sbjct: 157 VDILTFIA---WKLSG-FPSNRVVGSGTNLDSSRFRFLIADHLDVNAQDVQAYIVGEHGD 212

Query: 234 -----------AGITILPLFSQATPKANLSSEDIEALTKRTQDGGTEVVEAKAGKGSATL 282
                       G+ IL    +         E +E + K   D   EV+     KG  + 
Sbjct: 213 SSVALWSSISVGGVPILSFLEKQ--DIAYEKETLENIHKAVVDSAYEVISL---KGYTSW 267

Query: 283 SMAYAGAIFADACLK 297
           ++ Y+ A  A + L+
Sbjct: 268 AIGYSAANLARSLLR 282


>29200.m000165 malate dehydrogenase, putative
          Length = 332

 Score = 49.3 bits (116), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 34/102 (33%), Positives = 51/102 (50%), Gaps = 4/102 (3%)

Query: 110 VKGYVGEDQLGQALEGSDVVIIPAGVPRKPGMTRDDLFNINAGIVKGLCQAISKY-CPNA 168
           +KG V    + +A  G +V ++  G PRK GM R D+ + N  I K    A+ K+   N 
Sbjct: 66  LKGVVATTDVVEACTGVNVAVMVGGFPRKEGMERKDVMSKNVSIYKSQASALEKHAAANC 125

Query: 169 LVNMISNPVNSTVPIAAEVFKKAGTYDEKRLFGVTTLDVVRA 210
            V +++NP N+   I  E    A +  EK +  +T LD  RA
Sbjct: 126 KVLVVANPANTNALILREF---APSIPEKNITCLTRLDHNRA 164


>29636.m000769 l-lactate dehydrogenase, putative
          Length = 350

 Score = 47.8 bits (112), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 61/256 (23%), Positives = 104/256 (40%), Gaps = 29/256 (11%)

Query: 59  KVAVLGAAGGIGQPLALLMKLNPLVSNLALYDIANTP---GVAADVSHINTRSEVKGYVG 115
           K++V+GA G +G  +A  +    L   LAL D AN     G   D+ H          + 
Sbjct: 39  KISVIGA-GNVGMAIAQTILTQDLADELALVD-ANPEKLRGEMLDLQHAAAFLPRTKILA 96

Query: 116 EDQLGQALEGSDVVIIPAGVPRKPGMTRDDLFNINAGIVKGLCQAISKYCPNALVNMISN 175
                  + GSD+ I+ AG  +  G +R +L   N  + K +   ++K+ P++++ ++SN
Sbjct: 97  STDYSVTV-GSDLCIVSAGARQIAGESRLNLLQRNVALFKMIIPPLAKFSPDSILMIVSN 155

Query: 176 PVNSTVPIAAEVFKKAGTYDEKRLFGV-TTLDVVRAKTFYAGXXXXXXXXXXXXXXGGH- 233
           PV+    IA   +K +G +   R+ G  T LD  R +   A               G H 
Sbjct: 156 PVDVLTYIA---WKLSG-FPSNRVIGSGTNLDSSRFRFLIADHLDVNAQDVQAYIVGEHG 211

Query: 234 ------------AGITILPLFSQATPKANLSSEDIEALTKRTQDGGTEVVEAKAGKGSAT 281
                        G+ IL    +   +     E +E + K       EV+     KG  +
Sbjct: 212 DSSVALWSSISVGGVPILSFLEKQ--QIAYEQETLENIHKAVVHSAYEVISL---KGYTS 266

Query: 282 LSMAYAGAIFADACLK 297
            ++ Y+ A  A + L+
Sbjct: 267 WAIGYSAANLARSILR 282