Jatropha Genome Database
- JcCB0389821.10
BLASTP 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= JcCB0389821.10 - phase: 1 /partial
(436 letters)
Database: castor_wgs_0.1_aa
31,221 sequences; 10,419,776 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
27647.m000179 two-component sensor histidine kinase bacteria, pu... 664 0.0
29889.m003245 sensor histidine kinase, putative 168 4e-42
29848.m004559 two-component system sensor histidine kinase/respo... 134 1e-31
29737.m001227 two-component system sensor histidine kinase/respo... 131 8e-31
29929.m004752 two-component sensor histidine kinase bacteria, pu... 117 1e-26
30147.m014309 two-component system sensor histidine kinase/respo... 110 1e-24
29751.m001898 DNA binding protein, putative 103 2e-22
30180.m001019 DNA binding protein, putative 99 3e-21
29929.m004754 two-component sensor histidine kinase bacteria, pu... 96 2e-20
30174.m008957 sensor histidine kinase, putative 88 9e-18
30054.m000786 transcription factor, putative 87 2e-17
29986.m001672 two-component sensor histidine kinase bacteria, pu... 84 1e-16
29983.m003131 DNA binding protein, putative 80 1e-15
29950.m001149 transcription factor, putative 78 8e-15
29813.m001501 transcription factor, putative 77 2e-14
30017.m000317 transcription factor, putative 74 2e-13
29780.m001324 conserved hypothetical protein 73 2e-13
29660.m000765 hypothetical protein 73 3e-13
28883.m000751 DNA binding protein, putative 70 1e-12
29805.m001544 transcription factor, putative 69 3e-12
29904.m002952 transcription factor, putative 69 3e-12
29701.m000580 hypothetical protein 69 5e-12
29637.m000753 transcription factor, putative 69 5e-12
30169.m006598 transcription factor, putative 68 7e-12
29807.m000474 conserved hypothetical protein 68 8e-12
29676.m001636 DNA binding protein, putative 68 9e-12
29805.m001543 transcription factor, putative 66 3e-11
29680.m001711 DNA binding protein, putative 65 6e-11
28582.m000316 transcription factor, putative 65 6e-11
29827.m002675 transcription factor, putative 64 1e-10
29780.m001368 conserved hypothetical protein 64 1e-10
29842.m003572 DNA binding protein, putative 63 2e-10
28582.m000318 conserved hypothetical protein 63 3e-10
28582.m000317 transcription factor, putative 62 5e-10
27757.m000022 conserved hypothetical protein 62 6e-10
30226.m001993 hypothetical protein 62 7e-10
29814.m000747 DNA binding protein, putative 60 1e-09
30170.m013948 hypothetical protein 60 3e-09
30068.m002645 transcription factor, putative 59 4e-09
27973.m000086 DNA binding protein, putative 58 8e-09
27914.m000409 transcription factor, putative 58 9e-09
28738.m000151 hypothetical protein 55 7e-08
29790.m000831 DNA binding protein, putative 54 2e-07
>27647.m000179 two-component sensor histidine kinase bacteria,
putative
Length = 669
Score = 664 bits (1713), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 343/438 (78%), Positives = 378/438 (86%), Gaps = 9/438 (2%)
Query: 2 SSVNEGTEGFLKCQKKRSSPKDEDDAEQENDDPSTSKKPRVVWSVELHQQFVSAVNQLGI 61
SSVNEGTEG LK QK+RS+ KDEDD E ++DDPSTSKKPRVVWSVELHQQFVSAVNQLGI
Sbjct: 192 SSVNEGTEGVLKGQKRRSNSKDEDDGEPDSDDPSTSKKPRVVWSVELHQQFVSAVNQLGI 251
Query: 62 DKAVPKRILELMNVPGLTRENVASHLQKFRLYLKRLSGVAQQGGISNTFCGPLDSNGKLN 121
DKAVPKRILELMNVPGLTRENVASHLQKFRLYLKRLSGVAQQGGIS+TFCGP+DSN KLN
Sbjct: 252 DKAVPKRILELMNVPGLTRENVASHLQKFRLYLKRLSGVAQQGGISSTFCGPMDSNVKLN 311
Query: 122 SLGRFDIQALAASGQIPPQTLAALHAELFGRPTSSLVTTMDQPALLQASIQGPKCIPVEH 181
SLGRFDIQALAASGQIPPQTLAALHAELFGRPT SLVTTMDQP LLQAS Q PKCIPVEH
Sbjct: 312 SLGRFDIQALAASGQIPPQTLAALHAELFGRPTGSLVTTMDQPTLLQASRQSPKCIPVEH 371
Query: 182 GVAFGQPLVKCQPSISKHFPKNIVSVEDVASGFGAWPSNNLGTVGPNTNLGCITTQNGNM 241
GV FGQP+VKC ISKHFP+N+VSVE+V+SG+GAWPSN+LGTVGP+TNLG +TTQNGNM
Sbjct: 372 GVTFGQPIVKCSSGISKHFPQNMVSVEEVSSGYGAWPSNSLGTVGPSTNLGGMTTQNGNM 431
Query: 242 LMDILH----XXXXXXXXSIPETGRSINVQPSCLVVPSQSSASFQAGNCPASINQNCNFN 297
LMDI H S+ + RSINVQPSCLVVPSQSSA FQAGN PAS+NQ+ NFN
Sbjct: 432 LMDIFHQQQKQQQPQQQQSLADPSRSINVQPSCLVVPSQSSACFQAGNSPASVNQS-NFN 490
Query: 298 RGAVIDYSLLSSQSNNT--NIGHIRDGDLKNTGVVSGYSAPGSIS-PTSSCSVNADSGIT 354
R VIDYSLLSSQSNN+ NIGHI +GDLK TG V+GYSAPGS+S P SSCSVNADSG+
Sbjct: 491 RNVVIDYSLLSSQSNNSALNIGHIPEGDLKTTGAVNGYSAPGSLSPPASSCSVNADSGVP 550
Query: 355 RQVQNSTTTFGASRHMPGLAPNICDFQGSYGTKLGEVLDQGP-LRNLGFVGKGTSIPTRF 413
RQVQN T FGA R +P L+PNI + QGSYG + ++LDQGP +NLGFVGKGT IP+RF
Sbjct: 551 RQVQNPTLAFGAVRQLPALSPNIFNIQGSYGVRSDDILDQGPFFKNLGFVGKGTCIPSRF 610
Query: 414 AVDEFEVPINDLSHGKVY 431
AVDEFE P ++LSHGK+Y
Sbjct: 611 AVDEFETPSSNLSHGKLY 628
>29889.m003245 sensor histidine kinase, putative
Length = 682
Score = 168 bits (426), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 105/181 (58%), Positives = 127/181 (70%), Gaps = 13/181 (7%)
Query: 1 ASSVNEGTEGFLKCQKKRSSPKDEDDAEQENDDPSTSKKPRVVWSVELHQQFVSAVNQLG 60
+SS NEG + KKR KDE++ E DD ST KKPRVVWSVELHQQFV+AVNQLG
Sbjct: 181 SSSANEGN---WRNSKKR---KDEEEEGDERDDTSTLKKPRVVWSVELHQQFVAAVNQLG 234
Query: 61 IDKAVPKRILELMNVPGLTRENVASHLQKFRLYLKRLSGVAQ-QGGISNTFCGPLDSN-G 118
IDKAVPK+ILELMNVPGLTRENVASHLQK+RLYL+RLSGV+Q Q + N F P ++ G
Sbjct: 235 IDKAVPKKILELMNVPGLTRENVASHLQKYRLYLRRLSGVSQHQNNLGNAFISPQEATYG 294
Query: 119 KLNSLGRFDIQALAASGQIPPQTLAALHAELFGRPTSSLVTTMDQPALLQA---SIQGPK 175
L+S D+Q LAA+GQ+P Q+LA L A GR S++ + M P + Q S + PK
Sbjct: 295 PLSSFNGIDLQTLAATGQLPAQSLATLQAAGLGR--SAVKSRMPIPIVDQRNLFSFENPK 352
Query: 176 C 176
Sbjct: 353 L 353
>29848.m004559 two-component system sensor histidine kinase/response
regulator, putative
Length = 663
Score = 134 bits (336), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 77/160 (48%), Positives = 99/160 (61%), Gaps = 15/160 (9%)
Query: 29 QENDDPSTSKKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGLTRENVASHLQ 88
EN+DP+T KKPRVVWSVELH++FV+AVNQLG+DKAVPK+IL+LMNV LTRENVASHLQ
Sbjct: 186 HENEDPTTQKKPRVVWSVELHRKFVAAVNQLGVDKAVPKKILDLMNVEKLTRENVASHLQ 245
Query: 89 KFRLYLKRLSGVAQQGGISNTFCGPLDSNGKLNSLGR-FDIQALAASGQIPPQTLAALHA 147
K+RLYLKR+S VA Q +N S+ +G Q +A +GQ T L
Sbjct: 246 KYRLYLKRISTVANQQ--ANMVAALGSSDASYLQMGSGLGFQGIAGAGQFHNATFRPL-- 301
Query: 148 ELFGRPTSSLVTTMDQPALLQASIQGPKCIPVEHGVAFGQ 187
P S ++ ++ PA L G + +P + GQ
Sbjct: 302 -----PPSGMLGRLNSPAGL-----GMRGLPSPGVIQLGQ 331
>29737.m001227 two-component system sensor histidine kinase/response
regulator, putative
Length = 676
Score = 131 bits (329), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 68/129 (52%), Positives = 92/129 (71%), Gaps = 3/129 (2%)
Query: 30 ENDDPSTSKKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGLTRENVASHLQK 89
+ D+P KKPRVVWSVELH++FV+AVNQLG+DKAVPK+IL+LMNV GLTRENVASHLQK
Sbjct: 197 DTDEPGAQKKPRVVWSVELHRKFVAAVNQLGLDKAVPKKILDLMNVEGLTRENVASHLQK 256
Query: 90 FRLYLKRLSGVA-QQGGISNTFCGPLDSNGKLNSLGRF-DIQALAASGQIPPQTLAALH- 146
+RLYLKR+S A QQ + F S ++ SL F + + L+ G++ ++++ H
Sbjct: 257 YRLYLKRISSTASQQANMVAAFGIKDSSYLRMASLDGFGEFRTLSGPGRLSSTSISSYHP 316
Query: 147 AELFGRPTS 155
+ + GR S
Sbjct: 317 SGMLGRLNS 325
>29929.m004752 two-component sensor histidine kinase bacteria,
putative
Length = 584
Score = 117 bits (293), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 58/97 (59%), Positives = 72/97 (74%), Gaps = 4/97 (4%)
Query: 5 NEGTEGFLKCQKKRSSPKDEDDAEQENDDP----STSKKPRVVWSVELHQQFVSAVNQLG 60
+ +G+L C + +S K D E ++DD ST+KK RVVWSV+LHQ+FV AVNQ+G
Sbjct: 160 DHSDDGYLFCGEDLTSVKKRKDIENKHDDKDGESSTTKKARVVWSVDLHQKFVKAVNQIG 219
Query: 61 IDKAVPKRILELMNVPGLTRENVASHLQKFRLYLKRL 97
DK PK+IL+LMNVP LTRENVASHLQK+RLYL RL
Sbjct: 220 PDKVGPKKILDLMNVPWLTRENVASHLQKYRLYLSRL 256
>30147.m014309 two-component system sensor histidine kinase/response
regulator, putative
Length = 754
Score = 110 bits (276), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 50/79 (63%), Positives = 63/79 (79%), Gaps = 3/79 (3%)
Query: 26 DAEQENDDPSTSKKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGLTRENVAS 85
D +Q D PS KK +VVW+ LH +F+ A+N +G+DKAVPKRILE MNVPGLTRENVAS
Sbjct: 194 DHDQGEDAPSAPKKAKVVWTNSLHNRFLQAINHIGLDKAVPKRILEFMNVPGLTRENVAS 253
Query: 86 HLQKFRLYLKRLSGVAQQG 104
HLQK+RL+LK+ VA++G
Sbjct: 254 HLQKYRLFLKK---VAERG 269
>29751.m001898 DNA binding protein, putative
Length = 316
Score = 103 bits (256), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 46/76 (60%), Positives = 62/76 (81%), Gaps = 3/76 (3%)
Query: 32 DDPSTS---KKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGLTRENVASHLQ 88
+DP+T+ K+PR+VW+ +LH++FV V LGI AVPK I++LMNV GLTRENVASHLQ
Sbjct: 145 EDPATARTLKRPRLVWTPQLHKRFVDVVAYLGIKNAVPKTIMQLMNVEGLTRENVASHLQ 204
Query: 89 KFRLYLKRLSGVAQQG 104
K+RLYLKR+ G++ +G
Sbjct: 205 KYRLYLKRMQGLSSEG 220
>30180.m001019 DNA binding protein, putative
Length = 315
Score = 99.4 bits (246), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 45/71 (63%), Positives = 60/71 (84%), Gaps = 1/71 (1%)
Query: 32 DDPS-TSKKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGLTRENVASHLQKF 90
D+P+ T K+PR+VW+ +LH++FV AV LGI AVPK I++LM+V GLTRENVASHLQK+
Sbjct: 96 DEPARTLKRPRLVWTPQLHKRFVDAVAHLGIKNAVPKTIMQLMSVDGLTRENVASHLQKY 155
Query: 91 RLYLKRLSGVA 101
RLYLKR+ G++
Sbjct: 156 RLYLKRMQGLS 166
>29929.m004754 two-component sensor histidine kinase bacteria,
putative
Length = 419
Score = 96.3 bits (238), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 43/65 (66%), Positives = 54/65 (83%)
Query: 33 DPSTSKKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGLTRENVASHLQKFRL 92
D S++K R+VW+V+LHQ+FV AV+Q+G DK PK+IL+ MNVP LTRENVA HLQK+RL
Sbjct: 176 DISSAKMARLVWTVDLHQKFVKAVHQIGFDKIGPKKILDRMNVPWLTRENVAGHLQKYRL 235
Query: 93 YLKRL 97
YL RL
Sbjct: 236 YLSRL 240
>30174.m008957 sensor histidine kinase, putative
Length = 437
Score = 87.8 bits (216), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 44/90 (48%), Positives = 60/90 (66%), Gaps = 1/90 (1%)
Query: 15 QKKRSSPKDEDDAEQENDDPSTS-KKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELM 73
QK E D ++E ST KKP+++W+ ELH +F+ A+ LGID A PK+IL+ M
Sbjct: 179 QKSEGKELQEMDKDEEATVTSTFPKKPKLIWTNELHDRFLQAIRILGIDSAHPKKILKHM 238
Query: 74 NVPGLTRENVASHLQKFRLYLKRLSGVAQQ 103
NVPGL +EN++SHLQK+RL LKR Q+
Sbjct: 239 NVPGLRKENISSHLQKYRLSLKREQEAIQK 268
>30054.m000786 transcription factor, putative
Length = 478
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 37/60 (61%), Positives = 49/60 (81%)
Query: 38 KKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGLTRENVASHLQKFRLYLKRL 97
KK +V W+ ELH++FV AV QLG+D+A+P RILE+M V GLTR NVASHLQKFR++ + +
Sbjct: 233 KKMKVDWTPELHKKFVQAVEQLGVDQAIPSRILEMMKVEGLTRHNVASHLQKFRMHKRHI 292
>29986.m001672 two-component sensor histidine kinase bacteria,
putative
Length = 473
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 38/89 (42%), Positives = 60/89 (67%), Gaps = 3/89 (3%)
Query: 17 KRSSPKDEDDAEQENDDPSTSKKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILEL---M 73
+ S + ++ + E DP+ + K R++W+ ELH++FV A N LG + AVP +ILE M
Sbjct: 193 RNSKRRRNNEYDDEPSDPAATGKKRMIWTEELHEKFVRAFNHLGHENAVPLKILECLQRM 252
Query: 74 NVPGLTRENVASHLQKFRLYLKRLSGVAQ 102
NV +TRE++ASHLQK+R+YL++ + Q
Sbjct: 253 NVHSITREHIASHLQKYRMYLRKQDDIPQ 281
>29983.m003131 DNA binding protein, putative
Length = 424
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 36/60 (60%), Positives = 47/60 (78%)
Query: 38 KKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGLTRENVASHLQKFRLYLKRL 97
+K +V W+ +LH++FV AV QLG+DKAVP RILELM + LTR N+ASHLQK+R + K L
Sbjct: 148 RKVKVDWTPDLHRRFVQAVEQLGVDKAVPSRILELMGIDCLTRHNIASHLQKYRSHRKHL 207
>29950.m001149 transcription factor, putative
Length = 419
Score = 78.2 bits (191), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 38/71 (53%), Positives = 50/71 (70%), Gaps = 2/71 (2%)
Query: 35 STSKKPRVVWSVELHQQFVSAVNQLG-IDKAVPKRILELMNVPGLTRENVASHLQKFRLY 93
ST KPR+ W+ +LH+ F+ AVNQLG DKA PK +++LM +PGLT ++ SHLQK+RL
Sbjct: 42 STDAKPRLKWTSDLHEHFIEAVNQLGGADKATPKTVMKLMGIPGLTLYHLKSHLQKYRLS 101
Query: 94 LKRLSGVAQQG 104
K L G A G
Sbjct: 102 -KNLHGQANSG 111
>29813.m001501 transcription factor, putative
Length = 361
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 35/59 (59%), Positives = 45/59 (76%), Gaps = 1/59 (1%)
Query: 35 STSKKPRVVWSVELHQQFVSAVNQLG-IDKAVPKRILELMNVPGLTRENVASHLQKFRL 92
ST KPR+ W+ ELHQ+FV AVNQLG DKA PK ++ +M +PGLT ++ SHLQK+RL
Sbjct: 16 STDAKPRLKWTPELHQRFVEAVNQLGGADKATPKSLMRVMGIPGLTLYHLKSHLQKYRL 74
>30017.m000317 transcription factor, putative
Length = 346
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 35/59 (59%), Positives = 44/59 (74%), Gaps = 1/59 (1%)
Query: 35 STSKKPRVVWSVELHQQFVSAVNQLG-IDKAVPKRILELMNVPGLTRENVASHLQKFRL 92
+T KPR+ W+VELH++FV AV QLG DKA PK I+ +M V GLT ++ SHLQKFRL
Sbjct: 19 TTDPKPRLRWTVELHERFVDAVTQLGGPDKATPKTIMRVMGVKGLTLYHLKSHLQKFRL 77
>29780.m001324 conserved hypothetical protein
Length = 408
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 35/63 (55%), Positives = 47/63 (74%), Gaps = 1/63 (1%)
Query: 36 TSKKPRVVWSVELHQQFVSAVNQLGIDKA-VPKRILELMNVPGLTRENVASHLQKFRLYL 94
T++K R WS ELH++FVSA+ QLG +A PK+I ELM V GLT + V SHLQK+RL+
Sbjct: 260 TARKQRRCWSPELHRRFVSALQQLGGSQAATPKQIRELMQVDGLTNDEVKSHLQKYRLHT 319
Query: 95 KRL 97
+R+
Sbjct: 320 RRM 322
>29660.m000765 hypothetical protein
Length = 549
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 31/60 (51%), Positives = 46/60 (76%)
Query: 38 KKPRVVWSVELHQQFVSAVNQLGIDKAVPKRILELMNVPGLTRENVASHLQKFRLYLKRL 97
++ RV+W+ ELH +F +A++ LG KA PK ILE+MNVP LT+ VASHLQK++ ++R+
Sbjct: 205 RRSRVLWTPELHLKFTAAISALGDKKARPKPILEMMNVPHLTQRQVASHLQKYKSQVRRI 264
>28883.m000751 DNA binding protein, putative
Length = 393
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 35/71 (49%), Positives = 47/71 (66%), Gaps = 1/71 (1%)
Query: 29 QENDDPSTSKKPRVVWSVELHQQFVSAVNQLG-IDKAVPKRILELMNVPGLTRENVASHL 87
+E+ D +K R WS ELH++F+ A+ QLG A PK+I ELM V GLT + V SHL
Sbjct: 223 KEDKDGQAQRKQRRCWSPELHRRFLHALQQLGGSHAATPKQIRELMKVDGLTNDEVKSHL 282
Query: 88 QKFRLYLKRLS 98
QK+RL+ +R S
Sbjct: 283 QKYRLHTRRPS 293
>29805.m001544 transcription factor, putative
Length = 336
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 34/63 (53%), Positives = 46/63 (73%), Gaps = 1/63 (1%)
Query: 31 NDDPSTSKKPRVVWSVELHQQFVSAVNQLG-IDKAVPKRILELMNVPGLTRENVASHLQK 89
N++PS + K R+ W+ ELH++FV AV QLG D+A PK +L +M V GLT +V SHLQK
Sbjct: 41 NNNPSLASKQRLRWTHELHERFVDAVAQLGGPDRATPKGVLRVMGVQGLTIYHVKSHLQK 100
Query: 90 FRL 92
+RL
Sbjct: 101 YRL 103
>29904.m002952 transcription factor, putative
Length = 303
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 33/59 (55%), Positives = 42/59 (71%), Gaps = 1/59 (1%)
Query: 35 STSKKPRVVWSVELHQQFVSAVNQLG-IDKAVPKRILELMNVPGLTRENVASHLQKFRL 92
+T KPR+ W+ ELH++FV AV QLG DKA PK I+ M V GLT ++ SHLQK+RL
Sbjct: 34 TTDPKPRLRWTAELHERFVDAVTQLGGPDKATPKTIMRTMGVKGLTLYHLKSHLQKYRL 92
>29701.m000580 hypothetical protein
Length = 164
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 42/101 (41%), Positives = 59/101 (58%), Gaps = 6/101 (5%)
Query: 37 SKKPRVVWSVELHQQFVSAVNQLG-IDKAVPKRILELMNVPGLTRENVASHLQKFRL--Y 93
S K R+ W+ ELH +F AVNQLG D+A PK IL+ M++PGLT +V SHLQK+R+ +
Sbjct: 9 SGKERLRWTQELHDRFERAVNQLGGPDRATPKGILKAMSIPGLTIYHVKSHLQKYRISKF 68
Query: 94 LKRLSGVAQQGGISNTFCGPLDSNG---KLNSLGRFDIQAL 131
+ + + SN+ LDSN ++ D QAL
Sbjct: 69 IPESNNKGNEESESNSNAKELDSNSEGDRIEMQYEDDFQAL 109
>29637.m000753 transcription factor, putative
Length = 491
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 36/69 (52%), Positives = 47/69 (68%), Gaps = 4/69 (5%)
Query: 39 KPRVVWSVELHQQFVSAVNQLG-IDKAVPKRILELMNVPGLTRENVASHLQKFRLYLKR- 96
KPR+ W+ ELH+ FV AVNQLG ++A PK +L+LM V GLT +V SHLQK+R R
Sbjct: 264 KPRMRWTPELHEAFVDAVNQLGGSERATPKGVLKLMKVEGLTIYHVKSHLQKYRTARYRP 323
Query: 97 --LSGVAQQ 103
L G ++Q
Sbjct: 324 DSLEGSSEQ 332
>30169.m006598 transcription factor, putative
Length = 536
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 38/82 (46%), Positives = 52/82 (63%), Gaps = 3/82 (3%)
Query: 14 CQKKRSSPKDEDDAEQENDDPSTS--KKPRVVWSVELHQQFVSAVNQLG-IDKAVPKRIL 70
C +S K DA + P T+ KPR+ W+ ELH+ FV A+ +LG +KA PK +L
Sbjct: 288 CNLNVASVKPSADAPSSHPSPGTAAVHKPRMRWTPELHESFVEAIIKLGGAEKATPKGVL 347
Query: 71 ELMNVPGLTRENVASHLQKFRL 92
+LMNV GLT +V SHLQK+R+
Sbjct: 348 KLMNVEGLTIYHVKSHLQKYRI 369
>29807.m000474 conserved hypothetical protein
Length = 474
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 35/71 (49%), Positives = 47/71 (66%), Gaps = 1/71 (1%)
Query: 36 TSKKPRVVWSVELHQQFVSAVNQLGIDK-AVPKRILELMNVPGLTRENVASHLQKFRLYL 94
T +K R WS +LH++FV+A+ LG + A PK+I ELM V GLT + V SHLQK+RL+
Sbjct: 248 THRKARRCWSPDLHRRFVNALQMLGGSQVATPKQIRELMKVDGLTNDEVKSHLQKYRLHT 307
Query: 95 KRLSGVAQQGG 105
+R S Q G
Sbjct: 308 RRPSPSPQAPG 318
>29676.m001636 DNA binding protein, putative
Length = 370
Score = 67.8 bits (164), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 34/69 (49%), Positives = 48/69 (69%), Gaps = 3/69 (4%)
Query: 41 RVVWSVELHQQFVSAVNQLGIDK-AVPKRILELMNVPGLTRENVASHLQKFRLYLKRL-- 97
R WS ELH++F+ A++QLG + A PK+I ELM V GLT + V SHLQK+RL++++L
Sbjct: 233 RRCWSPELHRRFIDALHQLGGSQVATPKQIRELMQVDGLTNDEVKSHLQKYRLHIRKLPA 292
Query: 98 SGVAQQGGI 106
S AQ +
Sbjct: 293 SSAAQANAL 301
>29805.m001543 transcription factor, putative
Length = 313
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 34/75 (45%), Positives = 51/75 (68%), Gaps = 3/75 (4%)
Query: 39 KPRVVWSVELHQQFVSAVNQLG-IDKAVPKRILELMNVPGLTRENVASHLQKFRLYLK-- 95
KPR+ W+ +LH +FV A++QLG +KA PK I+ MNV GLT ++ SHLQK+RL +
Sbjct: 44 KPRLRWTADLHNRFVDAISQLGGPNKATPKAIMRTMNVKGLTLFHLKSHLQKYRLGKQSG 103
Query: 96 RLSGVAQQGGISNTF 110
+ G A + G+S ++
Sbjct: 104 KDMGEASKDGLSGSY 118
>29680.m001711 DNA binding protein, putative
Length = 459
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 36/84 (42%), Positives = 49/84 (58%), Gaps = 4/84 (4%)
Query: 39 KPRVVWSVELHQQFVSAVNQLG-IDKAVPKRILELMNVPGLTRENVASHLQKFRLYLKRL 97
K R+ W+ ELH+ FV AVN+LG ++A PK +L+LMNV GLT +V SHLQK+R +
Sbjct: 233 KHRMRWTPELHEAFVEAVNKLGGSERATPKGVLKLMNVEGLTIYHVKSHLQKYRTARYKP 292
Query: 98 SGVAQQGGISNTFCGPLDSNGKLN 121
G S P+D L+
Sbjct: 293 ESAE---GTSEKKLSPIDEMKSLD 313
>28582.m000316 transcription factor, putative
Length = 424
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 31/57 (54%), Positives = 42/57 (73%), Gaps = 1/57 (1%)
Query: 37 SKKPRVVWSVELHQQFVSAVNQLG-IDKAVPKRILELMNVPGLTRENVASHLQKFRL 92
S K R+ W+ +LH++FV VN+LG DKA PK IL+LM+ GLT +V SHLQK+R+
Sbjct: 247 SSKTRIRWTQDLHEKFVECVNRLGGADKATPKAILKLMDSDGLTIFHVKSHLQKYRI 303
>29827.m002675 transcription factor, putative
Length = 260
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 30/55 (54%), Positives = 40/55 (72%), Gaps = 1/55 (1%)
Query: 39 KPRVVWSVELHQQFVSAVNQLG-IDKAVPKRILELMNVPGLTRENVASHLQKFRL 92
KPR+ W+ +LH +FV AV +LG DKA PK +L LM + GLT ++ SHLQK+RL
Sbjct: 25 KPRLRWTPDLHHRFVDAVTKLGGPDKATPKSVLRLMGLKGLTLYHLKSHLQKYRL 79
>29780.m001368 conserved hypothetical protein
Length = 298
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 31/56 (55%), Positives = 40/56 (71%), Gaps = 1/56 (1%)
Query: 37 SKKPRVVWSVELHQQFVSAVNQLG-IDKAVPKRILELMNVPGLTRENVASHLQKFR 91
SK PR+ W+ ELH FV A+ +LG DKA PK +L+LM+V GLT +V SHLQ +R
Sbjct: 16 SKVPRLRWTPELHHCFVHAIERLGGQDKATPKLVLQLMDVKGLTISHVKSHLQMYR 71
>29842.m003572 DNA binding protein, putative
Length = 309
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 31/56 (55%), Positives = 41/56 (73%), Gaps = 1/56 (1%)
Query: 37 SKKPRVVWSVELHQQFVSAVNQLG-IDKAVPKRILELMNVPGLTRENVASHLQKFR 91
SK PR+ W+ +LHQ FV AV +LG D+A PK +L++MNV GLT +V SHLQ +R
Sbjct: 64 SKLPRLRWTPDLHQCFVHAVERLGGEDRATPKMVLQIMNVKGLTISHVKSHLQMYR 119
>28582.m000318 conserved hypothetical protein
Length = 534
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 30/59 (50%), Positives = 42/59 (71%), Gaps = 1/59 (1%)
Query: 34 PSTSKKPRVVWSVELHQQFVSAVNQLG-IDKAVPKRILELMNVPGLTRENVASHLQKFR 91
P S+K R+ WS ELH++F++ V+ LG +KA PK IL++M GLT +V SHLQK+R
Sbjct: 166 PRHSRKNRMRWSRELHEKFINCVDNLGGAEKATPKTILKMMESKGLTIFHVKSHLQKYR 224
>28582.m000317 transcription factor, putative
Length = 316
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 29/59 (49%), Positives = 41/59 (69%), Gaps = 1/59 (1%)
Query: 34 PSTSKKPRVVWSVELHQQFVSAVNQLG-IDKAVPKRILELMNVPGLTRENVASHLQKFR 91
P+ S K R+ W+ ELH++F++ VN LG +KA P+ IL++M GLT V SHLQK+R
Sbjct: 176 PNVSSKKRMRWNQELHEKFINCVNNLGGAEKATPRTILKMMESKGLTIFQVKSHLQKYR 234
>27757.m000022 conserved hypothetical protein
Length = 182
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 34/70 (48%), Positives = 45/70 (64%), Gaps = 6/70 (8%)
Query: 28 EQENDDPST-----SKKPRVVWSVELHQQFVSAVNQLG-IDKAVPKRILELMNVPGLTRE 81
E+ + PS SK PR+ W+ ELH FV AV +LG D+A PK +L+LMNV GL+
Sbjct: 47 EESDKKPSVRPYVRSKMPRLRWTPELHLCFVKAVERLGGQDRATPKLVLQLMNVNGLSIA 106
Query: 82 NVASHLQKFR 91
+V SHLQ +R
Sbjct: 107 HVKSHLQMYR 116
>30226.m001993 hypothetical protein
Length = 295
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 29/55 (52%), Positives = 41/55 (74%), Gaps = 1/55 (1%)
Query: 39 KPRVVWSVELHQQFVSAVNQLG-IDKAVPKRILELMNVPGLTRENVASHLQKFRL 92
K R+ W+ +LH++FV V++LG +KA PK IL+LM V GLT +V SHLQK+R+
Sbjct: 223 KTRIKWTQDLHKRFVECVDRLGGAEKATPKLILKLMGVQGLTIFHVKSHLQKYRI 277
>29814.m000747 DNA binding protein, putative
Length = 375
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 48/79 (60%), Gaps = 5/79 (6%)
Query: 37 SKKPRVVWSVELHQQFVSAVNQLG-IDKAVPKRILELMNVPGLTRENVASHLQKFRLY-- 93
SK PR+ W+ +LH FV AV +LG ++A PK +L++MN+ GL+ +V SHLQ +R
Sbjct: 71 SKMPRLRWTPDLHLCFVHAVERLGGEERATPKLVLQMMNIKGLSIAHVKSHLQMYRSKKI 130
Query: 94 --LKRLSGVAQQGGISNTF 110
R G+ +GG N F
Sbjct: 131 DDATREQGLISEGGDRNIF 149
>30170.m013948 hypothetical protein
Length = 347
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 28/55 (50%), Positives = 36/55 (65%), Gaps = 1/55 (1%)
Query: 38 KKPRVVWSVELHQQFVSAVNQLG-IDKAVPKRILELMNVPGLTRENVASHLQKFR 91
+ PR+ W+ LH FV AV LG ++A PK +LELMNV LT +V SHLQ +R
Sbjct: 140 RAPRMRWTTTLHAHFVHAVQLLGGHERATPKSVLELMNVKDLTLAHVKSHLQMYR 194
>30068.m002645 transcription factor, putative
Length = 340
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 32/74 (43%), Positives = 44/74 (59%), Gaps = 2/74 (2%)
Query: 38 KKPRVVWSVELHQQFVSAVNQLG-IDKAVPKRILELMNVPGLTRENVASHLQKFRLYLKR 96
+ PR+ W+ LH +FV AV LG ++A PK +LELM+V LT +V SHLQ +R +K
Sbjct: 199 RAPRMRWTTTLHARFVHAVELLGGHERATPKSVLELMDVKDLTLAHVKSHLQMYRT-VKT 257
Query: 97 LSGVAQQGGISNTF 110
A G S+ F
Sbjct: 258 TDRAAASSGQSDIF 271
>27973.m000086 DNA binding protein, putative
Length = 356
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 27/55 (49%), Positives = 37/55 (67%), Gaps = 1/55 (1%)
Query: 38 KKPRVVWSVELHQQFVSAVNQLG-IDKAVPKRILELMNVPGLTRENVASHLQKFR 91
+ PR+ W+ LH +FV AV LG ++A PK +LELM+V LT +V SHLQ +R
Sbjct: 237 RAPRMRWTSSLHARFVHAVELLGGHERATPKSVLELMDVKDLTLAHVKSHLQMYR 291
>27914.m000409 transcription factor, putative
Length = 441
Score = 57.8 bits (138), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 27/55 (49%), Positives = 37/55 (67%), Gaps = 1/55 (1%)
Query: 38 KKPRVVWSVELHQQFVSAVNQLG-IDKAVPKRILELMNVPGLTRENVASHLQKFR 91
+ PR+ W+ LH +FV AV LG ++A PK +LELM+V LT +V SHLQ +R
Sbjct: 301 RAPRMRWTSTLHARFVHAVELLGGHERATPKSVLELMDVKDLTLAHVKSHLQMYR 355
>28738.m000151 hypothetical protein
Length = 68
Score = 55.1 bits (131), Expect = 7e-08, Method: Composition-based stats.
Identities = 29/53 (54%), Positives = 36/53 (67%), Gaps = 1/53 (1%)
Query: 37 SKKPRVVWSVELHQQFVSAVNQLGID-KAVPKRILELMNVPGLTRENVASHLQ 88
S+ PR+ W+ ELHQ FV AV +LG KA PKRIL+ M+V GL + SHLQ
Sbjct: 15 SQLPRLRWTPELHQDFVKAVEELGGKYKATPKRILQKMSVKGLNICQIKSHLQ 67
>29790.m000831 DNA binding protein, putative
Length = 309
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/57 (49%), Positives = 37/57 (64%), Gaps = 1/57 (1%)
Query: 41 RVVWSVELHQQFVSAVNQLG-IDKAVPKRILELMNVPGLTRENVASHLQKFRLYLKR 96
R W+ ELH +FV ++ LG + A PK+I E M V GLT + V SHLQK+RL +R
Sbjct: 202 RRSWTPELHARFVVVLHMLGGPEVATPKQIKEAMKVEGLTNDQVKSHLQKYRLNSRR 258