Jatropha Genome Database

JcCB0374621.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0374621.10 - phase: 1 /pseudo/partial
         (340 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29822.m003359 serine-threonine protein kinase, plant-type, putative   318   2e-87
29631.m000999 serine-threonine protein kinase, plant-type, putative   139   2e-33

>29822.m003359 serine-threonine protein kinase, plant-type, putative
          Length = 605

 Score =  318 bits (815), Expect = 2e-87,   Method: Compositional matrix adjust.
 Identities = 173/336 (51%), Positives = 222/336 (66%), Gaps = 29/336 (8%)

Query: 22  IQVLDAMIEH----LIWYRTHSCILLLMISISFTVSQPPVAGCSLDLPSSLPDYNNSSCT 77
           +Q L +M++H    L WY T+ CI +LMI++   VSQP    C+LDL  SLPDY  S+C 
Sbjct: 1   MQELISMVKHIRCLLSWYTTNICIFILMITLRVPVSQPLEVTCTLDLSFSLPDYYVSNCI 60

Query: 78  EGDWGGFLSKNCCGSAFHSYLHAVGRRANRTGLIYLNSTEQSSCLAEMEKSEADVFSCGI 137
           EGDWGGFLSKNCCGS FH+YLH++GRRANRTG IYL+S EQ SCL EM K EA+ FSCGI
Sbjct: 61  EGDWGGFLSKNCCGSTFHAYLHSLGRRANRTGFIYLDSDEQRSCLDEMGKYEAEDFSCGI 120

Query: 138 DKLTSGLGGCSDFSVANVSHRLGKELKSLSENCKFDGSDKESGELCSSCINSWQYIKEKH 197
           DKLTSG GGCSDFSVANV+ RLG +LK L+ENCKF+ SDKES + C SC++SWQ IK  H
Sbjct: 121 DKLTSGGGGCSDFSVANVTRRLGGKLKRLTENCKFEDSDKESDQSCRSCVSSWQDIKGHH 180

Query: 198 PSGN-DICRFAILISLTSTRIDDEIYIHRVFKCLENDKKQFISNVYQIQQNQK--GK*SL 254
            S N +ICRFA+L++LTSTRIDD  YI+RV++CL N      S    ++   K     SL
Sbjct: 181 SSSNANICRFAVLVALTSTRIDDNSYINRVYRCLANQNNDTESAETAVKSKPKISTGDSL 240

Query: 255 KLVQVS----------GS*LVAL*ELQ****LLPQKICLDVVKNQKIHLKRMADSVNSVA 304
           + + +S          G    A          +   I  ++V  +++  K   +      
Sbjct: 241 QPLMISIRLQGIWILIGCLFAAT--------AMIITIAANIVSRRRLKSKVPLEK----N 288

Query: 305 AFRNMRLKESRCSKFPLKEICSATENLSEKNLIGEG 340
           AF+N++L+ SRC KFPL+E+  AT NLS++NLIGEG
Sbjct: 289 AFKNLQLENSRCPKFPLREVYLATNNLSDENLIGEG 324


>29631.m000999 serine-threonine protein kinase, plant-type, putative
          Length = 499

 Score =  139 bits (350), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 72/178 (40%), Positives = 106/178 (59%), Gaps = 6/178 (3%)

Query: 28  MIEHLIWYRTHSCILLLMISISFTVSQPPVAGCSLD--LPSSLPDYNNSSCTEGDWGGFL 85
           M + ++ Y+      + ++++ F  SQ   + C LD  LPS++   NNS+C  G+WGGF+
Sbjct: 1   MAKPILKYQELLSTTIFLVAL-FITSQTSDSSCILDVQLPSAI---NNSNCAPGNWGGFI 56

Query: 86  SKNCCGSAFHSYLHAVGRRANRTGLIYLNSTEQSSCLAEMEKSEADVFSCGIDKLTSGLG 145
           S  CC   F  YL+A G+ A RTG +YLNSTEQ +CL  M+    DV  CGI KLT G G
Sbjct: 57  SNACCVPVFDEYLYASGQMAERTGQVYLNSTEQEACLISMKPVYNDVLGCGIQKLTGGSG 116

Query: 146 GCSDFSVANVSHRLGKELKSLSENCKFDGSDKESGELCSSCINSWQYIKEKHPSGNDI 203
           GCS ++ A+V  +LG  L  L+E+C+    D E  + C+SC+  W+ I     +G+D+
Sbjct: 117 GCSSYTKADVVTKLGNMLNDLAEDCRLIYLDDEHDQACNSCLKKWEEIGGSSNNGSDL 174