Jatropha Genome Database

JcCB0372261.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0372261.10 - phase: 2 /pseudo/partial
         (231 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

30128.m008678 Protein FRIGIDA, putative                               103   5e-23
29844.m003288 Protein FRIGIDA, putative                                83   1e-16
27613.m000638 Protein FRIGIDA, putative                                82   2e-16
29970.m001012 Protein FRIGIDA, putative                                79   2e-15
30128.m008680 hypothetical protein                                     75   2e-14
30178.m000882 conserved hypothetical protein                           74   6e-14
30128.m008668 conserved hypothetical protein                           73   1e-13
29912.m005544 conserved hypothetical protein                           59   2e-09

>30128.m008678 Protein FRIGIDA, putative
          Length = 716

 Score =  103 bits (258), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 57/139 (41%), Positives = 80/139 (57%), Gaps = 4/139 (2%)

Query: 61  NGMDPLEVICFLHFLAAYSLASTFTXXXXXXXXXXXXWHEKVPELVQALGLAEMIPNFIK 120
           +   PLEV+ FL  LA+Y LASTF              H   P L  ALG A+ I   I+
Sbjct: 364 DAEHPLEVLGFLQLLASYGLASTFDADELLTQLEVVVQHSLSPGLFHALGFADKISGIIQ 423

Query: 121 NLIKKKQRIVAVKYIFALDMVDKFPPVSILKDHL---SNSAKELQNENRNSTKVQIRAID 177
           NLIKKKQ I A++ I+  ++V+++PPV +LKD+L    N+AK ++  + NS K QI A +
Sbjct: 424 NLIKKKQHIEAIRVIYGFELVNEYPPVPLLKDYLHCSKNAAKRMRKAD-NSIKGQIEATN 482

Query: 178 RELNALKAVWKCIADYNIQ 196
           + +  LK    CI DY I+
Sbjct: 483 KRVADLKCALSCIQDYKIE 501


>29844.m003288 Protein FRIGIDA, putative
          Length = 520

 Score = 82.8 bits (203), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 55/203 (27%), Positives = 100/203 (49%), Gaps = 11/203 (5%)

Query: 28  VVGTVKESLSPDXSRVKRRGKRICTL----LGKKTGKNGMDPLEVICFLHFLAAYSLAST 83
           V+G  +  ++P    VK R K I       L ++ G   +   +V  FL  L  + +   
Sbjct: 211 VIGKCRVLVTPS---VKERAKEIAETWKRSLEERGGIENVKTPDVHTFLQHLVTFGIVKK 267

Query: 84  FTXXXXXXXXXXXXWHEKVPELVQALGLAEMIPNFIKNLIKKKQRIVAVKYIFALDMVDK 143
                         W +++P+L  +LGL + +P+ I+ LI + Q++ AV + + + +VDK
Sbjct: 268 EDVDLYRKLVVASAWRKQMPKLALSLGLGDKMPDMIEELISRGQQLDAVHFTYEVGLVDK 327

Query: 144 FPPVSILKDHLSN---SAKELQNENRNSTKVQIRAIDRELNALKAVWKCIADYNIQG-LS 199
           FPPV +LK  L +   +A  +  +  N+ +    A  +E +AL+AV KCI +Y ++    
Sbjct: 328 FPPVPLLKAFLKDAKKAAASILEDPDNTGRAAHLAARKEQSALRAVIKCIEEYKLEAEFP 387

Query: 200 PEVLEERILYWKSIKRRNFKPNS 222
           PE L++R+   +  K    +P +
Sbjct: 388 PENLKKRLEQLEKTKTEKKRPAA 410


>27613.m000638 Protein FRIGIDA, putative
          Length = 491

 Score = 82.0 bits (201), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 60/192 (31%), Positives = 97/192 (50%), Gaps = 9/192 (4%)

Query: 43  VKRRGKRICTLLGKKTGKNGMDPLEVICFLHFLAAYSLASTFTXXXXXXXXXXXXWH-EK 101
           VK + K +     +K   NG  P E + FL+ + A+ L   F                ++
Sbjct: 186 VKIKAKNLAFEWKEKVSLNGDSPSEALGFLNLIVAFELKDMFDDVNELLNYFVVIARFKQ 245

Query: 102 VPELVQALGLAEMIPNFIKNLIKKKQRIVAVKYIFALDMVDKFPPVSILKDHLSNSAKEL 161
              L + +GL + I + ++ LI   ++++AVK+IF   + DKF P  +L+DHL  S KE 
Sbjct: 246 ATVLARDIGLGDKINDLVQKLIDSGKQLLAVKFIFEFGLTDKFQPAPLLRDHLKES-KEF 304

Query: 162 QN----ENRNSTKVQIRAIDRELNALKAVWKCIADYNIQGLSPEV-LEERI--LYWKSIK 214
            +    E +NS K Q  A  RE+NALK+V + I ++N++   P + LE+RI  L  +   
Sbjct: 305 TDKVCKEEKNSVKAQNEARSREVNALKSVLRYIDEHNLEFDYPHLDLEKRIEMLEKQKAD 364

Query: 215 RRNFKPNSDLVP 226
           R+   P+ D  P
Sbjct: 365 RKVAAPSPDNRP 376


>29970.m001012 Protein FRIGIDA, putative
          Length = 570

 Score = 79.0 bits (193), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 55/186 (29%), Positives = 88/186 (47%), Gaps = 11/186 (5%)

Query: 43  VKRRGKRICTLLGKKTGKNGMDP-----LEVICFLHFLAAYSLASTFTXXXXXXXXXXXX 97
           +K++ K I      K    G D      LE   FL  L+ + +AS F             
Sbjct: 269 IKQQAKAIADEWKPKLASAGTDATNGNSLEADAFLQLLSTFRIASEFDEEELCKHVLVVA 328

Query: 98  WHEKVPELVQALGLAEMIPNFIKNLIKKKQRIVAVKYIFALDMVDKFPPVSILKDHLSNS 157
              + PEL ++LGL   +P  I+ LIK  +++ AV++I A  + + FPPV +LK +L + 
Sbjct: 329 RRRQAPELCRSLGLTHKMPGIIELLIKNGKQVEAVRFIHAFQLAESFPPVPLLKTYLKDF 388

Query: 158 AKELQNENRN--STKVQIRAIDRELNALKAVWKCIADYNIQGLSP-EVLEERILYW---K 211
            +  Q +  N      QI    +EL  LKAV +C+ +Y ++   P + L+ R+      K
Sbjct: 389 RRNSQGKGGNIGGATGQIDINAQELATLKAVIRCVEEYKLEADYPLDPLQRRVAQLAKSK 448

Query: 212 SIKRRN 217
           S K+R 
Sbjct: 449 SDKKRT 454


>30128.m008680 hypothetical protein
          Length = 209

 Score = 75.1 bits (183), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 47/174 (27%), Positives = 86/174 (49%), Gaps = 6/174 (3%)

Query: 12  GKXGYEVGYFKKNLYFVVGTVKES---LSPDXSRVKRRGKRICTLLGKKTGKNGMDPLEV 68
           G   +E    +++  F++  + E+   + PD   VK    R+     ++  ++    LEV
Sbjct: 28  GDLEFEEVVVRRSCLFLLEILMETRPEILPD---VKTEAMRLSLDWMRQMKRDSKHSLEV 84

Query: 69  ICFLHFLAAYSLASTFTXXXXXXXXXXXXWHEKVPELVQALGLAEMIPNFIKNLIKKKQR 128
           +  L  LA+Y LA+ F              H + PEL++AL L + I +F+KNLI K + 
Sbjct: 85  LGCLQLLASYKLATVFDTDKLLTYLEIVAHHNQAPELLRALDLTDKISSFLKNLITKNKY 144

Query: 129 IVAVKYIFALDMVDKFPPVSILKDHLSNSAKELQNENRNSTKVQIRAIDRELNA 182
             A+++I+A ++V++FPPV +LK+ + +    +         V+ R     LN+
Sbjct: 145 TEAIRFIYAFELVNEFPPVPLLKEFVKDIPTAIHKSRMRDKSVEERITVLNLNS 198


>30178.m000882 conserved hypothetical protein
          Length = 542

 Score = 73.9 bits (180), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 48/153 (31%), Positives = 79/153 (51%), Gaps = 4/153 (2%)

Query: 66  LEVICFLHFLAAYSLASTFTXXXXXXXXXXXXWHEKVPELVQALGLAEMIPNFIKNLIKK 125
           LE   FL  LA + +AS F                +  EL + LGL+E +P  I+ LI  
Sbjct: 295 LEAHAFLQLLATFGIASDFDEEELSRLIPMVSRRRQAAELYRFLGLSEKMPGVIEVLINS 354

Query: 126 KQRIVAVKYIFALDMVDKFPPVSILKDHLSN---SAKELQNENRNSTKVQIRAIDRELNA 182
            ++I AV   FA ++ ++F PV +LK +L     ++  ++  N +   VQ    +REL A
Sbjct: 355 GRQIDAVNLAFAFELTEQFSPVPLLKSYLKEVRKTSPPVKPGNASPIAVQNDVNERELTA 414

Query: 183 LKAVWKCIADYNIQGLSP-EVLEERILYWKSIK 214
           LKAV KCI ++ ++   P + L++R++  +  K
Sbjct: 415 LKAVIKCIEEHKLEEQYPVDPLQKRLVQLEKAK 447


>30128.m008668 conserved hypothetical protein
          Length = 624

 Score = 72.8 bits (177), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 47/165 (28%), Positives = 80/165 (48%), Gaps = 4/165 (2%)

Query: 66  LEVICFLHFLAAYSLASTFTXXXXXXXXXXXXWHEKVPELVQALGLAEMIPNFIKNLIKK 125
           LE++ FL  +A + +   F               E+ P L +A G A+   +FI+ LI K
Sbjct: 248 LELLGFLMLVAVFGIVEEFDKDETFKYFGNVVQREQAPVLFRAFGFADKAHDFIQKLIDK 307

Query: 126 KQRIVAVKYIFALDMVDKFPPVSILKDHLSNSAK---ELQNENRNSTKVQIRAIDRELNA 182
            +R+ AV +I+  ++V +FPPV +L+ H   + +   ++ N+  NS      A   +L A
Sbjct: 308 NKRLEAVPFIYEFELVGEFPPVPLLRAHAEYAEECYTKICNKGNNSLNALDNATGTQLAA 367

Query: 183 LKAVWKCIADYNIQG-LSPEVLEERILYWKSIKRRNFKPNSDLVP 226
           L+ + K I  Y +Q   S +++ +RIL  K  K       + L P
Sbjct: 368 LRGILKLIQKYKLQTQYSQKIIRKRILQLKKHKSEKKPAKTSLDP 412


>29912.m005544 conserved hypothetical protein
          Length = 547

 Score = 58.9 bits (141), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 40/155 (25%), Positives = 72/155 (46%), Gaps = 6/155 (3%)

Query: 65  PLEVICFLHFLAAYSLASTFTXXXXXXXXXXXXWHEKVPELVQALGLAEMIPNFIKNLIK 124
           P E + FL  +  + L + F                 + +L  A+G  E +   I  L+K
Sbjct: 244 PAEAVMFLQMVVVFGLKARFDEEYLRKLVMENATRRDMAKLAVAVGFGEKMEGMIDELVK 303

Query: 125 KKQRIVAVKYIFALDMVDKFPPVSILKDHLSNS----AKELQNENRNSTKVQIRAIDREL 180
             + + AV +     + +KFPPVS+LK ++ NS    A  L+N N ++      +   EL
Sbjct: 304 NGKEVEAVYFASESVLTEKFPPVSLLKSYIKNSKKITATILKNGNFSAAATD-ESNTVEL 362

Query: 181 NALKAVWKCIADYNIQG-LSPEVLEERILYWKSIK 214
           +++KAV  C+ D+ ++   S + L +R+   +  K
Sbjct: 363 SSIKAVINCVEDHKLESEFSLDSLRKRVTRLEKTK 397