Jatropha Genome Database

JcCB0372241.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0372241.10 + phase: 0 /pseudo/partial
         (145 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29929.m004503 beta-hexosaminidase, putative                           256   2e-69
29616.m000216 beta-hexosaminidase, putative                           119   6e-28
34575.m000024 Beta-hexosaminidase, putative                            70   4e-13

>29929.m004503 beta-hexosaminidase, putative
          Length = 527

 Score =  256 bits (654), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 122/140 (87%), Positives = 130/140 (92%), Gaps = 1/140 (0%)

Query: 1   AQTVYGALHGLQTFSQLCYFNFTTSMVEVPMVPWTIIDQPRFPYRGLLIDTSRHYLPLPV 60
           AQT+YGALHGLQTFSQLC+FNF TS++EV MVPWTIIDQPRF YRGLLIDTSRHY PLP+
Sbjct: 133 AQTIYGALHGLQTFSQLCHFNFKTSVIEVRMVPWTIIDQPRFSYRGLLIDTSRHYQPLPM 192

Query: 61  IEKVIDSMAYAKLNVLHWHIVDTQSFPLEIPSYPKLWNGAYSISERYTFADAAEIVRQVV 120
           I+KVIDSMAYAKLNVLHWHIVDTQSFPLEIPSYPKLWNGAYS+SERYTFADAAEIV    
Sbjct: 193 IKKVIDSMAYAKLNVLHWHIVDTQSFPLEIPSYPKLWNGAYSVSERYTFADAAEIV-SYA 251

Query: 121 SAQGIHVLAEIDVPGHALSW 140
             QGIH+LAEIDVPGHALSW
Sbjct: 252 ERQGIHILAEIDVPGHALSW 271


>29616.m000216 beta-hexosaminidase, putative
          Length = 571

 Score =  119 bits (298), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 67/143 (46%), Positives = 90/143 (62%), Gaps = 7/143 (4%)

Query: 1   AQTVYGALHGLQTFSQLCYFNFTTSMVEVPMVPWTIIDQPRFPYRGLLIDTSRHYLPLPV 60
           A TV+GA+ GL+TFSQL + N   S V V +  W   D P F +RGL++DTSR+Y P+  
Sbjct: 125 ADTVWGAMRGLETFSQLVWGN--PSRVPVGVYVW---DAPLFGHRGLMLDTSRNYYPVSD 179

Query: 61  IEKVIDSMAYAKLNVLHWHIVDTQSFPLEIPSYPKLW-NGAYSISERYTFADAAEIVRQV 119
           I + I +M+  KLN+ HWHI D+ SFP+  PS P L   G+Y  + RYT  D A++V+  
Sbjct: 180 IMRTISAMSANKLNIFHWHITDSHSFPMVFPSEPGLAEKGSYGNNMRYTPEDVADVVKFG 239

Query: 120 VSAQGIHVLAEIDVPGHALSWWG 142
           +   G+ VLAEID P H  SW G
Sbjct: 240 LE-HGVRVLAEIDSPAHTGSWAG 261


>34575.m000024 Beta-hexosaminidase, putative
          Length = 597

 Score = 69.7 bits (169), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 52/163 (31%), Positives = 78/163 (47%), Gaps = 29/163 (17%)

Query: 1   AQTVYGALHGLQTFSQLCYF-NFTTSMVEVPMVPWTIIDQPRFPYRGLLIDTSRHYLPLP 59
             +  G  +GLQ+   L          +++P +   I+D PRF YRG  +D +R++    
Sbjct: 36  GNSAAGVAYGLQSLRDLLPLPGAAPHGIDLPRL--HIVDAPRFDYRGFQLDVARNFHTRQ 93

Query: 60  VIEKVIDSMAYAKLNVLHWHIVDTQSFPLEIPSYPKLWN-GAY----------------- 101
            + K +D MA  KLN  H+H+ D + + LEIP  P+L + GA                  
Sbjct: 94  TVFKWLDLMARYKLNKFHFHLTDDEGWRLEIPGLPELTSIGAVRGHSARPGVRLQPAYGS 153

Query: 102 -------SISERYTFADAAEIVRQVVSAQGIHVLAEIDVPGHA 137
                  S S  YT AD  EI+R   +A+ I V+ EI++PGHA
Sbjct: 154 GPDPKDASGSGYYTRADYIEILR-YAAARHIDVIPEIEMPGHA 195