Jatropha Genome Database

JcCB0370211.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0370211.10 + phase: 0 /partial
         (162 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

30174.m008988 malic enzyme, putative                                  281   7e-77
29709.m001210 malic enzyme, putative                                  184   2e-47
29794.m003406 malic enzyme, putative                                   89   7e-19
29912.m005447 malic enzyme, putative                                   85   1e-17
30146.m003510 malic enzyme, putative                                   82   1e-16

>30174.m008988 malic enzyme, putative
          Length = 602

 Score =  281 bits (720), Expect = 7e-77,   Method: Compositional matrix adjust.
 Identities = 138/162 (85%), Positives = 141/162 (87%), Gaps = 1/162 (0%)

Query: 1   MWRLARFTASSLGLSRRFSTAIPGPCIVHKRGADILHDPWFNKDTGFPLTEXXXXXXXXX 60
           MW+LARF A+S   SRRFSTAIPGPCIVHKRGADILHDPWFNKDTGFPLTE         
Sbjct: 1   MWKLARF-ATSRCRSRRFSTAIPGPCIVHKRGADILHDPWFNKDTGFPLTERDRLGLRGL 59

Query: 61  XXXXVISFEQQYARFRESYRSLEKNTQGQPDSVVSLAKWRILNRLPDRNETLYYRVLIDN 120
               VISFE QY RF ESYRSLEKNTQGQPDSVVSLAKWRILNRL DRNETLYYRVLIDN
Sbjct: 60  LPPRVISFEHQYDRFMESYRSLEKNTQGQPDSVVSLAKWRILNRLHDRNETLYYRVLIDN 119

Query: 121 IKNFAPIIYTPTVGLVCQNYSGLFRRPRGMYFSAKDKGEMMS 162
           IK+FAPIIYTPTVGLVCQNYSGLFRRPRGMYFSAKDKGEMMS
Sbjct: 120 IKDFAPIIYTPTVGLVCQNYSGLFRRPRGMYFSAKDKGEMMS 161


>29709.m001210 malic enzyme, putative
          Length = 626

 Score =  184 bits (466), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 91/152 (59%), Positives = 105/152 (69%), Gaps = 1/152 (0%)

Query: 12  LGLSRRFSTAIPG-PCIVHKRGADILHDPWFNKDTGFPLTEXXXXXXXXXXXXXVISFEQ 70
           L  SR F+T     P IVHKR  DILHDPWFNK T F +TE             ++S EQ
Sbjct: 28  LNQSRSFTTTEGHRPTIVHKRSLDILHDPWFNKGTAFSMTERDRLDLRGLLPPNIMSSEQ 87

Query: 71  QYARFRESYRSLEKNTQGQPDSVVSLAKWRILNRLPDRNETLYYRVLIDNIKNFAPIIYT 130
           Q  RF    + LE + +  P    +LAKWRILNRL DRNET+YY+VLI NI+ +API+YT
Sbjct: 88  QIERFMADLKRLEVHARDGPSDPNALAKWRILNRLHDRNETMYYKVLIANIEEYAPIVYT 147

Query: 131 PTVGLVCQNYSGLFRRPRGMYFSAKDKGEMMS 162
           PTVGLVCQNYSGLFRRPRGMYFSA D+GEMMS
Sbjct: 148 PTVGLVCQNYSGLFRRPRGMYFSAADRGEMMS 179


>29794.m003406 malic enzyme, putative
          Length = 588

 Score = 89.4 bits (220), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 45/130 (34%), Positives = 68/130 (52%), Gaps = 10/130 (7%)

Query: 32  GADILHDPWFNKDTGFPLTEXXXXXXXXXXXXXVISFEQQYARFRESYRSLEKNTQGQPD 91
           G  +L DP  NK   F   E             ++S E Q  R   + R  +        
Sbjct: 49  GYTLLRDPRHNKGLAFNEKERDAHYLRGLLPPAILSQEHQEKRLMHNLRQYQ-------- 100

Query: 92  SVVSLAKWRILNRLPDRNETLYYRVLIDNIKNFAPIIYTPTVGLVCQNYSGLFRRPRGMY 151
             V L ++  +  L +RNE L+Y++LIDN++   P++YTPTVG  CQ Y  +FRRP+G+Y
Sbjct: 101 --VPLQRYMAMMDLQERNERLFYKLLIDNVEELLPVVYTPTVGEACQKYGSIFRRPQGLY 158

Query: 152 FSAKDKGEMM 161
            S K+KG+++
Sbjct: 159 ISLKEKGKIL 168


>29912.m005447 malic enzyme, putative
          Length = 591

 Score = 85.1 bits (209), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 43/130 (33%), Positives = 67/130 (51%), Gaps = 10/130 (7%)

Query: 32  GADILHDPWFNKDTGFPLTEXXXXXXXXXXXXXVISFEQQYARFRESYRSLEKNTQGQPD 91
           G  +L DP  NK   F   E             V + + Q  +   + R  +        
Sbjct: 52  GYSLLRDPRHNKGLAFSEKERDAHYLRGLLPPVVATQQLQEKKLMHTIRQYQ-------- 103

Query: 92  SVVSLAKWRILNRLPDRNETLYYRVLIDNIKNFAPIIYTPTVGLVCQNYSGLFRRPRGMY 151
             + L K+  +  L +RNE L+Y++LIDN++   PI+YTPTVG  CQ Y  +F+RP+G+Y
Sbjct: 104 --LPLQKYMAMMELEERNERLFYKLLIDNVEELLPIVYTPTVGEACQKYGSIFKRPQGLY 161

Query: 152 FSAKDKGEMM 161
            S K+KG+++
Sbjct: 162 ISLKEKGKIL 171


>30146.m003510 malic enzyme, putative
          Length = 641

 Score = 81.6 bits (200), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 43/130 (33%), Positives = 64/130 (49%), Gaps = 10/130 (7%)

Query: 32  GADILHDPWFNKDTGFPLTEXXXXXXXXXXXXXVISFEQQYARFRESYRSLEKNTQGQPD 91
           G  +L DP  NK   F   E             ++S E Q  +     R  +        
Sbjct: 102 GYSLLRDPHHNKGLAFNDKERDAHYLRGLLPPAIVSQELQVKKMMHIIRQYQ-------- 153

Query: 92  SVVSLAKWRILNRLPDRNETLYYRVLIDNIKNFAPIIYTPTVGLVCQNYSGLFRRPRGMY 151
             + L K+  +  L +RNE L+Y++LI N++   PI+YTPTVG  CQ Y  +F RP+G+Y
Sbjct: 154 --LPLQKYMAMMDLQERNEKLFYKLLIQNVEEMLPIVYTPTVGEACQKYGSIFGRPQGLY 211

Query: 152 FSAKDKGEMM 161
            S K+KG ++
Sbjct: 212 ISLKEKGRIL 221