Jatropha Genome Database

JcCB0369881.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0369881.10 + phase: 0 /pseudo/partial
         (236 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

30174.m008857 transketolase, putative                                 447   e-126
28507.m000160 transketolase, putative                                 195   2e-50
31825.m000041 transketolase, putative                                  57   6e-09
52425.m000013 transketolase, putative                                  53   1e-07

>30174.m008857 transketolase, putative
          Length = 752

 Score =  447 bits (1149), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 213/236 (90%), Positives = 219/236 (92%), Gaps = 2/236 (0%)

Query: 1   EEDLKNFRQWGSRTPGHPENFETPGVEVTTGPLGQGIANAVGLALAEKHLAARYNKPDNE 60
           EEDLK+FRQWGS+TPGHPENFETPGVEVTTGPLGQGIANAVGLALAEKHLAAR+NKPDNE
Sbjct: 173 EEDLKSFRQWGSKTPGHPENFETPGVEVTTGPLGQGIANAVGLALAEKHLAARFNKPDNE 232

Query: 61  IVDHYTYVILGDGCQMEGIANEACSLAGHWGLGKLIAFYDDNHISIDGDTAIAFTESVDK 120
           IVDHYTY ILGDGCQMEGIANEACSLAGHWGLGKLIAFYDDNHISIDGDT IAFTESVDK
Sbjct: 233 IVDHYTYAILGDGCQMEGIANEACSLAGHWGLGKLIAFYDDNHISIDGDTEIAFTESVDK 292

Query: 121 RFEGLGWHVIWVKNGNTGYDEIRAAIKEAKAVKDKPTLIKVTTTIGYGSPNKANSYSVHG 180
           RFE LGWHVIWVKNGNTGYDEIRAAIKEAKAV DKPT+IKVTTTIGYGSPNKANSYSVHG
Sbjct: 293 RFEALGWHVIWVKNGNTGYDEIRAAIKEAKAVTDKPTMIKVTTTIGYGSPNKANSYSVHG 352

Query: 181 SALGAKEVDATRKNLGWPYEPFHVPEDVKKHWSRHVPRGCYRSKSRME*PKFAEYE 236
           SALGAKEVDATRKNLGWP+EPFHVPEDVK HWSRH+P G           KFAEYE
Sbjct: 353 SALGAKEVDATRKNLGWPFEPFHVPEDVKNHWSRHIPGGAAFEAEWNA--KFAEYE 406


>28507.m000160 transketolase, putative
          Length = 789

 Score =  195 bits (495), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 114/228 (50%), Positives = 142/228 (62%), Gaps = 5/228 (2%)

Query: 2   EDLKNFRQWGSRTPGHPENFETPGVEVTTGPLGQGIANAVGLALAEKHLAARYNKPDNEI 61
           EDLK   + GSRTPGHPEN  T G+EV TGPLGQG+ANAVGLALAE HLAAR+NKPD  I
Sbjct: 207 EDLKCLCKLGSRTPGHPENTVTDGIEVPTGPLGQGVANAVGLALAEAHLAARFNKPDCVI 266

Query: 62  VDHYTYVILGDGCQMEGIANEACSLAGHWGLGKLIAFYDDNHISIDGDTAIAFTESVDKR 121
           VDH TY I+GDGC MEGIA+EA SLA HW L KL   YDDN  +IDG T++AF+E +  R
Sbjct: 267 VDHRTYCIMGDGCAMEGIAHEAASLAAHWKLHKLTLIYDDNQNTIDGPTSLAFSEDISAR 326

Query: 122 FEGLGWHVIWVKNGNTGYDEIRAAIKEAKAVKDKPTLIKVTTTIGYGSPNKANSYSVHGS 181
           F  LGW  I V N +   D  + A+  A    +KPT I+V T IG  S  +  S + HG+
Sbjct: 327 FSALGWDTITVDNIHEDMDSFKNALLSAVNETNKPTFIRVKTLIGRLSKKEGTSKAHHGT 386

Query: 182 ALGAKEVDATRKNLGW-PYEPFHVPEDVKKHWSRHVPRGCYRSKSRME 228
                +    ++ + W   +PFHV   +   +S    + C+  K  ME
Sbjct: 387 -FDEDDTKEMKQKVKWNNQDPFHV---IPMVYSEMQTQTCHSEKLEME 430


>31825.m000041 transketolase, putative
          Length = 118

 Score = 57.4 bits (137), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 26/39 (66%), Positives = 30/39 (76%)

Query: 2   EDLKNFRQWGSRTPGHPENFETPGVEVTTGPLGQGIANA 40
           E+L+ FRQ GS+T GHPE     G+E TTGPLGQGIANA
Sbjct: 80  EELQRFRQLGSKTAGHPEYGHATGIETTTGPLGQGIANA 118


>52425.m000013 transketolase, putative
          Length = 261

 Score = 53.1 bits (126), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 52/182 (28%), Positives = 77/182 (42%), Gaps = 20/182 (10%)

Query: 1   EEDLKNFRQWGSRTPGHPENFETPGVEVTTGPLGQGIANAVGLALAEKHLAARYNKPDNE 60
           +E L  F +  +   GHP     P +   TG LG G++ A G ALA+K + +R N+    
Sbjct: 78  DEQLTTFHRDATLLAGHPPAAGIPEIMFATGSLGHGLSLAAGTALADK-MRSRDNR---- 132

Query: 61  IVDHYTYVILGDGCQMEGIANEACSLAGHWGLGKLIAFYDDNHISIDGDT-AIAFTESVD 119
                T+ +  DG   EG   EA   A H  L  L    D N +   G T  +A    + 
Sbjct: 133 -----TFCVTSDGEWQEGSTWEALIFASHHKLANLTILVDHNGLQGFGSTDTVASMSPLW 187

Query: 120 KRFEGLGWHVIWVKNGNTGYD--EIRAAIKEAKAVKDKPTLIKVTTTIGYGSPNKANSYS 177
            + +G    +  V     G+D   IRAA+ +     D+P +I + T+ G G     N   
Sbjct: 188 NKLQGFDVSIDVVP----GHDLPAIRAALNKR---LDRPHIIVLQTSKGKGVSFMENRME 240

Query: 178 VH 179
            H
Sbjct: 241 WH 242