Jatropha Genome Database

JcCB0368851.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0368851.10 - phase: 0 /pseudo
         (66 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

30131.m006987 Light-regulated protein precursor, putative              91   1e-19

>30131.m006987 Light-regulated protein precursor, putative
          Length = 140

 Score = 90.9 bits (224), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 46/63 (73%), Positives = 53/63 (84%)

Query: 1  MQAALTIAPPVVPLKPSKNLSQVTFSPPKFGVSSIAPRSSAIKAATATVEYEPSTVDYSS 60
          MQAAL+IAPPV P+KPSKNLSQV  SPP+ G SS+APR+S IKAA ATV Y+ STVDYSS
Sbjct: 1  MQAALSIAPPVFPVKPSKNLSQVILSPPQLGASSLAPRASPIKAAYATVAYDTSTVDYSS 60

Query: 61 TLS 63
           +S
Sbjct: 61 VIS 63