Jatropha Genome Database

JcCB0367281.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0367281.10 - phase: 0 /pseudo/partial
         (120 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

28200.m000195 transaldolase total2, putative                          114   1e-26

>28200.m000195 transaldolase total2, putative
          Length = 392

 Score =  114 bits (285), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 56/59 (94%), Positives = 57/59 (96%)

Query: 37 IFFKLQRSFPQIRASSGFSSSLDTGASTELDAVSSFSEIVPDTVIFDDFEKFPPTAATV 95
          +FFK Q SFPQIRASSGFSSSLDTGASTELDAVSSFSEIVPDTVIFDDFEKFPPTAATV
Sbjct: 36 VFFKFQSSFPQIRASSGFSSSLDTGASTELDAVSSFSEIVPDTVIFDDFEKFPPTAATV 94