Jatropha Genome Database

JcCB0367131.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0367131.10 - phase: 0 /pseudo/partial
         (374 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29780.m001316 ATP binding protein, putative                           571   e-163
29889.m003371 ATP binding protein, putative                           266   1e-71

>29780.m001316 ATP binding protein, putative
          Length = 2970

 Score =  571 bits (1472), Expect = e-163,   Method: Compositional matrix adjust.
 Identities = 281/339 (82%), Positives = 309/339 (91%)

Query: 18   AESRQTYSEEKEAEVKLLERSVEELECTINVLENKVDILKGXXXXXXXXXXXXXXXXHAI 77
             ES++ Y+EEKEAEVKLLERSVEELECT+NVLENKVDILKG                HA+
Sbjct: 2464 TESKKIYAEEKEAEVKLLERSVEELECTVNVLENKVDILKGEADRQRLQREEIEDELHAL 2523

Query: 78   NHQMQNVKSADSDMKRHLDEKEKGLEEALKHIQILERDIAEKDAEITKCKAHISELNLHA 137
            NHQMQNV+SAD+DMK  LDEKEK L+EALK +QILERDIAEKDAE+ +CK HISELNLHA
Sbjct: 2524 NHQMQNVRSADTDMKWRLDEKEKNLQEALKQLQILERDIAEKDAEVAQCKEHISELNLHA 2583

Query: 138  EAQASEYKQKFKALEAMAEQVKPEGHFSHIANSSSNKLEKNASKSRGSGSPFKCIGLGLA 197
            EAQASEYKQKFK+LEAMAEQVKP+GHFSH  NSSSNKLEKNA+KSRGSGSPFKCIGLGLA
Sbjct: 2584 EAQASEYKQKFKSLEAMAEQVKPDGHFSHTTNSSSNKLEKNAAKSRGSGSPFKCIGLGLA 2643

Query: 198  QQMKSEKDEELTAARLRIEELESLAAGRQKEVFALNARLAAAESMTHDVIRDLLGVKLDM 257
            QQ+KSE+DEEL+AARLRIEELESLA  RQKEVFALNARLAAAESMTHDVIRDLLGVKLDM
Sbjct: 2644 QQIKSERDEELSAARLRIEELESLAVCRQKEVFALNARLAAAESMTHDVIRDLLGVKLDM 2703

Query: 258  TNYVEKEELIKLKQQLNEFIEERRGWLEEIDRKQAEMVAAQIALEKLHQRDQLLKAENDM 317
            TNYVE++E++KL++QLNEFIEERRGWLEEIDRKQAEMVAAQIALEKL QRDQLLK EN+M
Sbjct: 2704 TNYVEQQEVVKLRKQLNEFIEERRGWLEEIDRKQAEMVAAQIALEKLRQRDQLLKTENEM 2763

Query: 318  LKMENVNNKKRLMELEGEVKKLSGQQNLQQRIHHHAKVK 356
            LKMENVNNKKR++ELEGEVKKLSGQQN+QQRIHHHAK+K
Sbjct: 2764 LKMENVNNKKRVIELEGEVKKLSGQQNIQQRIHHHAKIK 2802


>29889.m003371 ATP binding protein, putative
          Length = 2140

 Score =  266 bits (680), Expect = 1e-71,   Method: Compositional matrix adjust.
 Identities = 164/370 (44%), Positives = 232/370 (62%), Gaps = 39/370 (10%)

Query: 18   AESRQTYSEEKEAEVKLLERSVEELECTINVLENKVDILKGXXXXXXXXXXXXXXXXHAI 77
            +E+ + Y+E+KE EVK+LE SVEELE TINVLE KV  +                    +
Sbjct: 1713 SEASKIYAEQKEEEVKILENSVEELESTINVLEKKVYEMDEEVERHRMIRESLELELQDL 1772

Query: 78   NHQMQNVKS----ADS----------DMKRHLDEKEKGLEEALKHIQILERDIAEKDAEI 123
              ++  V++     DS           + RHL+ K   L EA   I++L+RDIAEKD EI
Sbjct: 1773 RQRLLTVENFTDIVDSGNTISVQIEDPISRHLNTKSLELHEAHNQIRLLKRDIAEKDEEI 1832

Query: 124  TKCKAHISELNLHAEAQASEYKQKFKALEAMAEQVKPEGHFSHIANSSSNKLEKNASKSR 183
             +CK +ISEL LH+EAQAS+Y++K+K LEAM  +V+     S  A ++ +K EK++ ++R
Sbjct: 1833 KQCKEYISELVLHSEAQASQYQEKYKNLEAMVHEVRTNSVSSASAAATLDKSEKSSVRTR 1892

Query: 184  GSGSPFKCIGLGLAQQMKSEKDEELTAARLRIEELESLAAGRQKEVFALNARLAAAESMT 243
            GS SPF+CI   L QQM  EKD EL+ A+LR+EELE++ A RQKEV  L+ARLAAAESMT
Sbjct: 1893 GSSSPFRCIS-NLVQQMNLEKDHELSVAKLRVEELEAMLASRQKEVCVLHARLAAAESMT 1951

Query: 244  HDVIRDLLGVKLDMTNY------------------------VEKEELIKLKQQLNEFIEE 279
            HDVIRDLLGV+LDM NY                         +++E++ L++Q+N+ +EE
Sbjct: 1952 HDVIRDLLGVQLDMNNYANIIDQLQVQKLVEAAHQHTEEFNAKEQEILNLRRQINDLMEE 2011

Query: 280  RRGWLEEIDRKQAEMVAAQIALEKLHQRDQLLKAENDMLKMENVNNKKRLMELEGEVKKL 339
            +   + E + K A+++AA++ LE+L  RDQLL A+N+MLKM+  N  KR+ EL+  VK L
Sbjct: 2012 KESCISETNAKVADLLAAEMRLEQLQDRDQLLSAQNEMLKMDKTNLLKRVAELDEMVKTL 2071

Query: 340  SGQQNLQQRI 349
             G Q+ +Q+I
Sbjct: 2072 LGTQSTRQQI 2081