Jatropha Genome Database

JcCB0366431.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0366431.10 - phase: 0 
         (227 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

30170.m014000 DNA-3-methyladenine glycosylase, putative               348   1e-96
29687.m000564 DNA-3-methyladenine glycosylase, putative               249   9e-67
27956.m000346 DNA-3-methyladenine glycosylase, putative               196   1e-50
30138.m003895 DNA-3-methyladenine glycosylase, putative               192   8e-50
29958.m000943 DNA-3-methyladenine glycosylase, putative               186   8e-48

>30170.m014000 DNA-3-methyladenine glycosylase, putative
          Length = 336

 Score =  348 bits (892), Expect = 1e-96,   Method: Compositional matrix adjust.
 Identities = 169/212 (79%), Positives = 178/212 (83%), Gaps = 6/212 (2%)

Query: 21  TDPLYMSFHDEEWGVPVHDDRKLFELLVFSQALAEMSWPAILHMRDI-----FRKLFDNF 75
           +D LYMSFHDEEWGVPVHDD KLFELLVFSQALAEMSWP ILHMR+I     FRKLFDNF
Sbjct: 126 SDSLYMSFHDEEWGVPVHDDTKLFELLVFSQALAEMSWPTILHMRNIXXRNIFRKLFDNF 185

Query: 76  DPSSVAQFTEXXXXXXXXXXXXXXXEPKLRAIVENAKLLIKVQHEFGSFNNYCWRFVNHT 135
           DPSSVAQFTE               EPKLRAIVENAKLL+KVQ EFGSF+NYCWRFVN+ 
Sbjct: 186 DPSSVAQFTEKKLLSLKVNGNLLLSEPKLRAIVENAKLLLKVQQEFGSFSNYCWRFVNNK 245

Query: 136 PLRNGFRYARQVPVKTPKAELISKDLMQRGFRCVGPTVVYSFMQVAGIVNDHLVTCFRYQ 195
           PLRNGFRYARQ+PVKTPKAE ISKDLMQRGFRCVGPTVVYSFMQVAGIVNDHL+TCFRYQ
Sbjct: 246 PLRNGFRYARQIPVKTPKAEFISKDLMQRGFRCVGPTVVYSFMQVAGIVNDHLLTCFRYQ 305

Query: 196 ECNANVKKNCSPKIEETEVVVTKALETTHLSQ 227
           EC ANVKK C P +EE+E  VTKALE T LSQ
Sbjct: 306 ECIANVKKKCDPDVEESE-RVTKALENTCLSQ 336


>29687.m000564 DNA-3-methyladenine glycosylase, putative
          Length = 380

 Score =  249 bits (635), Expect = 9e-67,   Method: Compositional matrix adjust.
 Identities = 115/193 (59%), Positives = 142/193 (73%), Gaps = 2/193 (1%)

Query: 21  TDPLYMSFHDEEWGVPVHDDRKLFELLVFSQALAEMSWPAILHMRDIFRKLFDNFDPSSV 80
            DP Y +FHDEEWG+PVHDD+KLFELLV S ALAE++WPAIL  R IFR++F NFDP  V
Sbjct: 165 ADPCYTAFHDEEWGIPVHDDKKLFELLVLSGALAELTWPAILSKRHIFREVFANFDPVVV 224

Query: 81  AQFTEXXXXXXXXXXXXXXXEPKLRAIVENAKLLIKVQHEFGSFNNYCWRFVNHTPLRNG 140
           ++F E               E KLRAI+ENA+ + KV  E GSF+ Y W FVN+ P+ + 
Sbjct: 225 SKFNEKKIIAPGSTASSLLSEIKLRAIIENARQISKVTDELGSFDKYIWSFVNYKPIVSR 284

Query: 141 FRYARQVPVKTPKAELISKDLMQRGFRCVGPTVVYSFMQVAGIVNDHLVTCFRYQEC--N 198
           FRY RQVPVKTPKA++ISKDL++RGFR VGPTVVYSFMQVAG+ NDHL++CFR+QEC   
Sbjct: 285 FRYPRQVPVKTPKADVISKDLVRRGFRSVGPTVVYSFMQVAGLTNDHLISCFRFQECINA 344

Query: 199 ANVKKNCSPKIEE 211
           A  K+    K+E+
Sbjct: 345 AEGKEENGVKVED 357


>27956.m000346 DNA-3-methyladenine glycosylase, putative
          Length = 403

 Score =  196 bits (497), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 83/179 (46%), Positives = 123/179 (68%), Gaps = 2/179 (1%)

Query: 21  TDPLYMSFHDEEWGVPVHDDRKLFELLVFSQALAEMSWPAILHMRDIFRKLFDNFDPSSV 80
           +DP+Y+++HD+EWGVPVHDD+ LFELLV + A     W ++L  R+ FR+ F  FD   V
Sbjct: 224 SDPIYVAYHDQEWGVPVHDDKMLFELLVLTGAQIGSDWTSVLKKREAFREAFSGFDAEIV 283

Query: 81  AQFTEXXXXXXXXXXXXXXXEPKLRAIVENAKLLIKVQHEFGSFNNYCWRFVNHTPLRNG 140
           A+F+E               +  +R +V+N+  +++V+ EFGSF+ Y W FVNH P+   
Sbjct: 284 AKFSEKKTTSISAEYGMEISQ--VRGVVDNSNRILQVKKEFGSFDKYLWGFVNHKPITTQ 341

Query: 141 FRYARQVPVKTPKAELISKDLMQRGFRCVGPTVVYSFMQVAGIVNDHLVTCFRYQECNA 199
           +R + ++PVKT K+E ISKD+++RGFR VGPTV++SFMQ AG+ NDHL++C R+ +C A
Sbjct: 342 YRSSNKIPVKTSKSETISKDMVKRGFRYVGPTVMHSFMQAAGLSNDHLISCSRHHQCLA 400


>30138.m003895 DNA-3-methyladenine glycosylase, putative
          Length = 319

 Score =  192 bits (489), Expect = 8e-50,   Method: Compositional matrix adjust.
 Identities = 87/177 (49%), Positives = 118/177 (66%)

Query: 21  TDPLYMSFHDEEWGVPVHDDRKLFELLVFSQALAEMSWPAILHMRDIFRKLFDNFDPSSV 80
           +D +Y++FHDE WGVPV+DD +LFELL  S  L + +W  IL  + +FR+ F  FDP+ V
Sbjct: 132 SDKVYVAFHDECWGVPVYDDNQLFELLALSGMLMDYNWTEILKRKQLFREAFAGFDPNIV 191

Query: 81  AQFTEXXXXXXXXXXXXXXXEPKLRAIVENAKLLIKVQHEFGSFNNYCWRFVNHTPLRNG 140
           A   E               + ++R IV+NAK + K+  EFGSF+++ W  VN+ P  N 
Sbjct: 192 ANMGEKEILDIASNKAIMLADSRVRCIVDNAKCIAKIAREFGSFSSFMWGHVNYKPTINK 251

Query: 141 FRYARQVPVKTPKAELISKDLMQRGFRCVGPTVVYSFMQVAGIVNDHLVTCFRYQEC 197
           ++Y R VP++TPKAE ISKDL++RGFR VGP +VYSFMQ AG+  DHLV CFR+ EC
Sbjct: 252 YKYPRNVPLRTPKAEAISKDLLKRGFRFVGPVIVYSFMQAAGLTIDHLVDCFRHGEC 308


>29958.m000943 DNA-3-methyladenine glycosylase, putative
          Length = 403

 Score =  186 bits (472), Expect = 8e-48,   Method: Compositional matrix adjust.
 Identities = 83/177 (46%), Positives = 117/177 (66%), Gaps = 2/177 (1%)

Query: 21  TDPLYMSFHDEEWGVPVHDDRKLFELLVFSQALAEMSWPAILHMRDIFRKLFDNFDPSSV 80
           +DP+Y+++HDEEWGVPV DD+ LFELLV S A     W +IL  R  FR  F  FD   V
Sbjct: 224 SDPIYVAYHDEEWGVPVRDDKLLFELLVLSGAQVGSDWTSILKKRQDFRDAFSGFDAEIV 283

Query: 81  AQFTEXXXXXXXXXXXXXXXEPKLRAIVENAKLLIKVQHEFGSFNNYCWRFVNHTPLRNG 140
           A FTE                 ++R +V+N+  +++++ EFGSF+ Y W FVN+ P+   
Sbjct: 284 ADFTEKHMISISTEYGIDIN--RVRGVVDNSNRVLEIKKEFGSFSKYIWAFVNNKPISTQ 341

Query: 141 FRYARQVPVKTPKAELISKDLMQRGFRCVGPTVVYSFMQVAGIVNDHLVTCFRYQEC 197
           +++  ++PVKT K+E ISKD+++RGFR VGPT+V+SFMQ AG+ NDHL+TC R+  C
Sbjct: 342 YKFGHKIPVKTSKSESISKDMVRRGFRFVGPTMVHSFMQAAGLTNDHLITCHRHLPC 398