Jatropha Genome Database

JcCB0361311.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0361311.10 + phase: 1 /TE/partial
         (252 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

30125.m001256 conserved hypothetical protein                           64   1e-10
29808.m000890 conserved hypothetical protein                           57   7e-09
29890.m000286 conserved hypothetical protein                           55   3e-08
29852.m002022 conserved hypothetical protein                           54   5e-08
30203.m000411 conserved hypothetical protein                           54   7e-08
29770.m000335 conserved hypothetical protein                           50   9e-07
30192.m000551 conserved hypothetical protein                           49   2e-06
29989.m000417 conserved hypothetical protein                           48   4e-06

>30125.m001256 conserved hypothetical protein
          Length = 276

 Score = 63.5 bits (153), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 31/58 (53%), Positives = 41/58 (70%), Gaps = 7/58 (12%)

Query: 21 FVDTLPRVXGRTP----SSILVLMERWMDITHTFHLPFGEMTINPMDFVAIIGLPFGG 74
          F+ TLPR+   TP    +++  L+ERW D T+TF LPFGE TI P+DF A+IG+ FGG
Sbjct: 9  FLSTLPRL---TPKNNATAMTTLLERWSDTTYTFLLPFGEKTIMPLDFTALIGIRFGG 63


>29808.m000890 conserved hypothetical protein
          Length = 263

 Score = 57.4 bits (137), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 32/77 (41%), Positives = 48/77 (62%), Gaps = 7/77 (9%)

Query: 5   LPIQVQDHVLEAGFGRFVDTLPRVXGRTP----SSILVLMERWMDITHTFHLPFGEMTIN 60
           +P  V++ V    F  F+ TLP   G  P    ++  VL+ERW + +HTF LPF ++T  
Sbjct: 57  IPTHVKEQVEVTDFHHFLGTLP---GFNPRYNLTTPTVLLERWSNTSHTFLLPFRKITDI 113

Query: 61  PMDFVAIIGLPFGGRSI 77
           P+DFVA++G+ FGG S+
Sbjct: 114 PLDFVALMGIQFGGVSL 130


>29890.m000286 conserved hypothetical protein
          Length = 230

 Score = 55.1 bits (131), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 28/59 (47%), Positives = 37/59 (62%), Gaps = 1/59 (1%)

Query: 17 GFGRFVDTLPRVXGRTPS-SILVLMERWMDITHTFHLPFGEMTINPMDFVAIIGLPFGG 74
          GF  F+ TL R   +    ++  L+ERW D THTF LPFGEMTI  +DF+A+  + F G
Sbjct: 39 GFNTFLGTLTRFKPKNEVIAVTTLLERWSDTTHTFLLPFGEMTITSLDFIALTRVRFDG 97


>29852.m002022 conserved hypothetical protein
          Length = 115

 Score = 54.3 bits (129), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 27/56 (48%), Positives = 34/56 (60%)

Query: 34 SSILVLMERWMDITHTFHLPFGEMTINPMDFVAIIGLPFGGRSIAFDEQLRTSDRL 89
          +++  L+ERW D THTF L F EMTI PM F A+ G  FGG S+  D +   S  L
Sbjct: 23 TALTALLERWSDTTHTFVLHFREMTITPMHFTALTGTRFGGVSVPLDGRPVVSPTL 78


>30203.m000411 conserved hypothetical protein
          Length = 147

 Score = 53.9 bits (128), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 34/89 (38%), Positives = 53/89 (59%), Gaps = 6/89 (6%)

Query: 40  MERWMDITHTFHLPFGEMTINPMDFVAIIGLPFGGRSIAFDEQLRTSDRLGLRASLKVAI 99
           MERW + THTF + F EMTI P+DF+A+IGL + G S+  D+  R +  L L   L   +
Sbjct: 1   MERWSNPTHTFLVLFREMTIMPLDFMALIGLVWWG-SVPLDD--RPAYNLTLIPQL---L 54

Query: 100 EMEPTIFDKRVRYESIISHYEDMHRDHVA 128
              P I DK++R  ++ ++ + ++   VA
Sbjct: 55  RCSPFIKDKKLRSGNLKTYLQPLYETVVA 83


>29770.m000335 conserved hypothetical protein
          Length = 116

 Score = 50.1 bits (118), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 21/53 (39%), Positives = 33/53 (62%)

Query: 34  SSILVLMERWMDITHTFHLPFGEMTINPMDFVAIIGLPFGGRSIAFDEQLRTS 86
           +++ +L+ERW+D  H F L F EMT+ P+D+ A+IGL +       D + R S
Sbjct: 50  AAMAMLIERWLDTMHNFQLHFREMTVTPLDYTALIGLHWDSNPPMLDYRFRQS 102


>30192.m000551 conserved hypothetical protein
          Length = 189

 Score = 49.3 bits (116), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 27/68 (39%), Positives = 39/68 (57%), Gaps = 1/68 (1%)

Query: 4   RLPIQVQDHVLEAGFGRFVDTLPRVXGRTPSSILV-LMERWMDITHTFHLPFGEMTINPM 62
           +LP  V++ +   G   F+ TLP    R   + L  L+ERW + THTF LPF + TI P+
Sbjct: 122 QLPFYVRERLEVIGSHTFLGTLPGFKPRNNDTALTALLERWSNTTHTFLLPFDKRTITPL 181

Query: 63  DFVAIIGL 70
           DF  + G+
Sbjct: 182 DFATLTGV 189


>29989.m000417 conserved hypothetical protein
          Length = 73

 Score = 48.1 bits (113), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 25/70 (35%), Positives = 40/70 (57%), Gaps = 1/70 (1%)

Query: 2  FDRLPIQVQDHVLEAGFGRFVDTL-PRVXGRTPSSILVLMERWMDITHTFHLPFGEMTIN 60
          +D LP +V+  V   GF +    L P       +++ +L+E+W D+ HTF L F EMT+ 
Sbjct: 3  WDELPAKVRAWVANIGFTQLASILHPLHVRHDVTTMTMLIEQWSDMKHTFQLHFREMTMT 62

Query: 61 PMDFVAIIGL 70
          P+D+ A+  L
Sbjct: 63 PLDYTALTEL 72