Jatropha Genome Database

JcCB0360101.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0360101.10 + phase: 0 /partial
         (62 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29804.m001506 Palmitoyltransferase TIP1, putative                     132   2e-32
29850.m000273 zinc finger protein, putative                            91   1e-19

>29804.m001506 Palmitoyltransferase TIP1, putative
          Length = 545

 Score =  132 bits (333), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 60/62 (96%), Positives = 61/62 (98%)

Query: 1   IARNITTNELANAIRYGYLRGPDGRFRNPYNHGCRKNCADFIIQGYTDDDEIAWPPLQQV 60
           IARNITTNELANA RYGYLRGPDGRFRNPYNHGCRKNC+DFIIQGYTDDDEIAWPPLQQV
Sbjct: 484 IARNITTNELANAARYGYLRGPDGRFRNPYNHGCRKNCSDFIIQGYTDDDEIAWPPLQQV 543

Query: 61  AS 62
           AS
Sbjct: 544 AS 545


>29850.m000273 zinc finger protein, putative
          Length = 302

 Score = 90.9 bits (224), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 37/51 (72%), Positives = 44/51 (86%)

Query: 1   IARNITTNELANAIRYGYLRGPDGRFRNPYNHGCRKNCADFIIQGYTDDDE 51
           I+ NITTNE+ANA+RY YLRGP GRFRNPY+HG RKNC+DF+I GY +D E
Sbjct: 158 ISHNITTNEMANAMRYSYLRGPGGRFRNPYDHGLRKNCSDFLINGYNEDIE 208