Jatropha Genome Database

JcCB0357671.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0357671.10 + phase: 0 /pseudo/partial
         (244 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

56072.m000045 conserved hypothetical protein                          387   e-108
29631.m001048 conserved hypothetical protein                          260   5e-70
30174.m008939 conserved hypothetical protein                          223   6e-59
29666.m001450 conserved hypothetical protein                          179   1e-45
29822.m003409 conserved hypothetical protein                           71   5e-13
29844.m003168 conserved hypothetical protein                           55   4e-08
29912.m005335 conserved hypothetical protein                           52   2e-07
29974.m000237 conserved hypothetical protein                           52   4e-07
30178.m000861 conserved hypothetical protein                           50   1e-06
30205.m001613 conserved hypothetical protein                           47   8e-06

>56072.m000045 conserved hypothetical protein
          Length = 748

 Score =  387 bits (995), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 180/215 (83%), Positives = 198/215 (92%)

Query: 1   PPDKKGVKPVQSPGPFLPGSGPRYVYTREEIQGEPLTRDEVKDLIKGCLKTKRQLNMGRD 60
           PPDKKGVKPVQ PGPFLPG+GPRYVY+REEI GEPLT +EVK LI+GCLKT+RQLNMGRD
Sbjct: 217 PPDKKGVKPVQKPGPFLPGAGPRYVYSREEILGEPLTTEEVKILIEGCLKTRRQLNMGRD 276

Query: 61  GLTHNMLDNIHAHWKRRRVCKIKCKGVCTVDMDNVCQQLEEKTGGKVIHRKAGLVYLFRG 120
           GLTHNMLDNIHAHWKRRRVCKIKC GVCTVDMDNVCQQLEE+TGGKVI+RK G+VYLFRG
Sbjct: 277 GLTHNMLDNIHAHWKRRRVCKIKCMGVCTVDMDNVCQQLEERTGGKVIYRKGGVVYLFRG 336

Query: 121 RNYNYRTRPRFPLMLWKPVTPVYPRLIQRAPEGLTVEEAAEMRKKGRDLIPIRKLARNGV 180
           RNYNYRTRPRFPLMLWKPVTPVYPRLI+RAPEGLT+EEA+EMR+KGR LIPI KLA+NGV
Sbjct: 337 RNYNYRTRPRFPLMLWKPVTPVYPRLIKRAPEGLTLEEASEMRRKGRKLIPICKLAKNGV 396

Query: 181 FYNLAHEVRLAFQVCELVRINCQAIVRSDCRKIGA 215
           + NL  EVR AF+ CELVRI+CQ +  SD RK+GA
Sbjct: 397 YCNLVKEVREAFEECELVRIDCQGVNGSDYRKVGA 431


>29631.m001048 conserved hypothetical protein
          Length = 561

 Score =  260 bits (664), Expect = 5e-70,   Method: Compositional matrix adjust.
 Identities = 122/212 (57%), Positives = 162/212 (76%)

Query: 4   KKGVKPVQSPGPFLPGSGPRYVYTREEIQGEPLTRDEVKDLIKGCLKTKRQLNMGRDGLT 63
           K+GVK  + PG    G  P  V +R EI G+PLTR E+K L+K  L   RQ+N+GRDGLT
Sbjct: 160 KEGVKYFEMPGDLQFGKFPEEVKSRREILGKPLTRWEIKQLVKPLLSDNRQVNLGRDGLT 219

Query: 64  HNMLDNIHAHWKRRRVCKIKCKGVCTVDMDNVCQQLEEKTGGKVIHRKAGLVYLFRGRNY 123
           HNML+ IH+HW+R  VCK++CKG+ TVDM+N+C+ LEE+TGGK+I+R  G+VYLF GRNY
Sbjct: 220 HNMLELIHSHWRRSPVCKVRCKGIPTVDMNNICRHLEERTGGKIIYRIGGVVYLFCGRNY 279

Query: 124 NYRTRPRFPLMLWKPVTPVYPRLIQRAPEGLTVEEAAEMRKKGRDLIPIRKLARNGVFYN 183
           +YR+R R+P+MLWKP  PVYP+LIQ APEGLT  EA E R+KG++L+PI KLA+NGV+  
Sbjct: 280 DYRSRVRYPVMLWKPAAPVYPKLIQDAPEGLTKAEADEFREKGKNLLPICKLAKNGVYIT 339

Query: 184 LAHEVRLAFQVCELVRINCQAIVRSDCRKIGA 215
           L  +VR AF+   LV+I+C+ +  SD +K+GA
Sbjct: 340 LVRDVRNAFEGSPLVKIDCKGMNPSDYKKLGA 371


>30174.m008939 conserved hypothetical protein
          Length = 411

 Score =  223 bits (568), Expect = 6e-59,   Method: Compositional matrix adjust.
 Identities = 109/191 (57%), Positives = 141/191 (73%), Gaps = 2/191 (1%)

Query: 26  YTREEIQGEPLTRDEVKDLIKGCL--KTKRQLNMGRDGLTHNMLDNIHAHWKRRRVCKIK 83
           + RE+IQG+PLT  E K L++ C   KTK+Q+N+GRDGLTHNML++IH HWK     +IK
Sbjct: 147 WWREQIQGQPLTNAERKILVESCQRHKTKKQINLGRDGLTHNMLNDIHNHWKHAEAVRIK 206

Query: 84  CKGVCTVDMDNVCQQLEEKTGGKVIHRKAGLVYLFRGRNYNYRTRPRFPLMLWKPVTPVY 143
           C GV TVDM NVC QLE+KT GK+IHR  GL+ L+RGRNY+ + RP  PLM+W+P  P+Y
Sbjct: 207 CLGVPTVDMKNVCTQLEDKTFGKIIHRHCGLLVLYRGRNYHPKKRPVIPLMMWRPHEPIY 266

Query: 144 PRLIQRAPEGLTVEEAAEMRKKGRDLIPIRKLARNGVFYNLAHEVRLAFQVCELVRINCQ 203
           P+LI+   EGL++EE  EMRKKG  L  + KLA+NG + +L   VR AF V ELVRI+CQ
Sbjct: 267 PKLIKTTIEGLSIEETKEMRKKGLALPALTKLAKNGYYASLVPMVRDAFLVNELVRIDCQ 326

Query: 204 AIVRSDCRKIG 214
            + +SD +KIG
Sbjct: 327 GLPKSDYKKIG 337


>29666.m001450 conserved hypothetical protein
          Length = 409

 Score =  179 bits (454), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 81/163 (49%), Positives = 117/163 (71%)

Query: 53  RQLNMGRDGLTHNMLDNIHAHWKRRRVCKIKCKGVCTVDMDNVCQQLEEKTGGKVIHRKA 112
           RQ+N+G+ G+THNMLD+IH HWK+    +IKC GV T+DMDNVC  LE+K+GGK+I+R  
Sbjct: 204 RQINLGKGGVTHNMLDDIHNHWKKAEAVRIKCLGVPTLDMDNVCFHLEDKSGGKIIYRHI 263

Query: 113 GLVYLFRGRNYNYRTRPRFPLMLWKPVTPVYPRLIQRAPEGLTVEEAAEMRKKGRDLIPI 172
            ++ L+RGRNY+ + RP  P+MLWKP  P++P+L++   +GL+ EE  E+R +G +   +
Sbjct: 264 NILLLYRGRNYDPKNRPVIPIMLWKPYAPIFPKLVKNVADGLSFEETKEIRNRGLNSPAL 323

Query: 173 RKLARNGVFYNLAHEVRLAFQVCELVRINCQAIVRSDCRKIGA 215
            KL RNGV+  +   VR AFQ  E+VR++C  +  SDC+KIG 
Sbjct: 324 MKLTRNGVYVYVVERVREAFQTEEVVRLDCTHVGSSDCKKIGV 366


>29822.m003409 conserved hypothetical protein
          Length = 1009

 Score = 70.9 bits (172), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 33/90 (36%), Positives = 54/90 (60%)

Query: 36  LTRDEVKDLIKGCLKTKRQLNMGRDGLTHNMLDNIHAHWKRRRVCKIKCKGVCTVDMDNV 95
           L+ +E++ L +  +  KR+L +G+ G+T  +++ IH  W+R  V KI C+ +C ++M   
Sbjct: 158 LSEEELRRLRRIGIAEKRKLKVGKAGITEGIVNGIHERWRRSEVVKIVCEDLCRMNMKRT 217

Query: 96  CQQLEEKTGGKVIHRKAGLVYLFRGRNYNY 125
              LE KTGG V+ R    + L+RG NY Y
Sbjct: 218 HDLLERKTGGLVVWRAGSKIVLYRGVNYIY 247



 Score = 59.3 bits (142), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 39/112 (34%), Positives = 57/112 (50%), Gaps = 4/112 (3%)

Query: 30  EIQGEPLTRDEVKDLIKGCLKTKRQLNMGRDGLTHNMLDNIHAHWKRRRVCKIKCKGVCT 89
           EI  E +T +E   L K  LK K  L +GR G+    ++N+H HWK R + KI CK    
Sbjct: 573 EIDKEGITDEERYMLRKVGLKMKPFLLIGRRGVFDGTIENMHLHWKYRELVKIICKERSL 632

Query: 90  VDMDNVCQQLEEKTGGKVIH----RKAGLVYLFRGRNYNYRTRPRFPLMLWK 137
             +  V Q LE ++GG ++      K   + ++RG+NY      R P +L K
Sbjct: 633 NAVHEVAQSLEAESGGILVAVERVSKGYAIVVYRGKNYQRPALLRPPTLLSK 684


>29844.m003168 conserved hypothetical protein
          Length = 773

 Score = 54.7 bits (130), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 29/97 (29%), Positives = 52/97 (53%)

Query: 27  TREEIQGEPLTRDEVKDLIKGCLKTKRQLNMGRDGLTHNMLDNIHAHWKRRRVCKIKCKG 86
           +R ++    L   E++ L     + K ++ +   G+T  ++D+IH  WK   + ++K +G
Sbjct: 96  SRTQLAELTLPESELRRLRNLTYQIKSKVRVKGAGVTQEVVDSIHDRWKTSEIVRVKVEG 155

Query: 87  VCTVDMDNVCQQLEEKTGGKVIHRKAGLVYLFRGRNY 123
              ++M  + + LE KTGG VI R    V L+RG +Y
Sbjct: 156 APALNMRRMHEILERKTGGLVIWRSGTSVSLYRGVSY 192


>29912.m005335 conserved hypothetical protein
          Length = 930

 Score = 52.4 bits (124), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 28/94 (29%), Positives = 48/94 (51%)

Query: 30  EIQGEPLTRDEVKDLIKGCLKTKRQLNMGRDGLTHNMLDNIHAHWKRRRVCKIKCKGVCT 89
           E+    L   E+K L    L+   ++ +G  G+  +++D +H  W+   V K+K +   +
Sbjct: 320 ELAERMLPEHELKRLRNVALRMYERIKVGAAGINQDLVDAVHEKWRLDEVVKLKFEEPLS 379

Query: 90  VDMDNVCQQLEEKTGGKVIHRKAGLVYLFRGRNY 123
            +M    + LE +TGG VI R    V L+RG +Y
Sbjct: 380 FNMRRTHEILENRTGGLVIWRSGSSVVLYRGISY 413



 Score = 46.6 bits (109), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 22/79 (27%), Positives = 42/79 (53%), Gaps = 4/79 (5%)

Query: 49  LKTKRQLNMGRDGLTHNMLDNIHAHWKRRRVCKIKCKGVCTVDMDNVCQQLEEKTGGKVI 108
           L  K  L +G+ G+    ++N+H HWK R + K+  +G     + ++   LE ++GG ++
Sbjct: 755 LSMKPYLFLGKRGVYDGTIENMHLHWKYRELVKVIVRGKSFAQVKHIAISLEAESGGVLV 814

Query: 109 H----RKAGLVYLFRGRNY 123
                 K   + ++RG+NY
Sbjct: 815 SIERTTKGYAIIVYRGKNY 833


>29974.m000237 conserved hypothetical protein
          Length = 745

 Score = 51.6 bits (122), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 23/86 (26%), Positives = 48/86 (55%)

Query: 39  DEVKDLIKGCLKTKRQLNMGRDGLTHNMLDNIHAHWKRRRVCKIKCKGVCTVDMDNVCQQ 98
           +E++ L +  +  + ++N+ + GLT  +++ IH  W++  + ++K   V   DM    + 
Sbjct: 213 EELRRLRRMGMFLRERVNVPKAGLTKEVVEKIHDKWRKNELVRLKFHEVLAHDMKTAHEI 272

Query: 99  LEEKTGGKVIHRKAGLVYLFRGRNYN 124
            E +TGG VI R   ++ ++RG +Y 
Sbjct: 273 TERRTGGLVIWRAGSVMVVYRGSSYE 298


>30178.m000861 conserved hypothetical protein
          Length = 458

 Score = 49.7 bits (117), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 28/93 (30%), Positives = 51/93 (54%), Gaps = 3/93 (3%)

Query: 34  EPLTRDEVKDLIKGCLKTKRQLNMGRDGLTHNMLDNIHAHWKRRRVCKIKCKGVCTVDMD 93
           E LT +E    +K  LK K  + +GR G+   ++ N+H HWK+ +  ++  K     ++ 
Sbjct: 169 EILTPEEHFFFLKMGLKCKNYVPVGRRGIYQGVILNMHLHWKKHQTVQVVVKTFSPEEVK 228

Query: 94  NVCQQLEEKTGGKV--IHRKAGLVYLFRGRNYN 124
            +  +L   TGG V  IH +  ++ ++RG+NY+
Sbjct: 229 EIAAELARLTGGIVLDIHEENTII-MYRGKNYS 260


>30205.m001613 conserved hypothetical protein
          Length = 742

 Score = 47.0 bits (110), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 27/94 (28%), Positives = 49/94 (52%), Gaps = 4/94 (4%)

Query: 34  EPLTRDEVKDLIKGCLKTKRQLNMGRDGLTHNMLDNIHAHWKRRRVCKIKCKGVCTVDMD 93
           E +T +E + L K  LK +  L +GR G+   +++ +H HWK R V K+         + 
Sbjct: 592 EMMTEEERECLRKIGLKMRSSLLLGRRGVFDGVIEGLHQHWKHREVVKVISLQRMFAQVI 651

Query: 94  NVCQQLEEKTGGKVIH----RKAGLVYLFRGRNY 123
              + LE +TGG ++     ++   + ++RG+NY
Sbjct: 652 RTAKFLEAETGGILVSIDKLKEGHAIIIYRGKNY 685