Jatropha Genome Database

JcCB0354791.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0354791.10 - phase: 1 /partial
         (102 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

30169.m006297 phosphoglycerate kinase, putative                       195   3e-51
30169.m006296 phosphoglycerate kinase, putative                       176   2e-45

>30169.m006297 phosphoglycerate kinase, putative
          Length = 479

 Score =  195 bits (496), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 100/102 (98%), Positives = 102/102 (100%)

Query: 1   VKTFSEALETTKTVIWNGPMGVFEFDKFAVGTEAIAKKLAELSGKGVTTIIGGGDSVAAV 60
           VKTF+EALETTKTVIWNGPMGVFEFDKFAVGTEAIAKKLAELSGKGVTTIIGGGDSVAAV
Sbjct: 378 VKTFNEALETTKTVIWNGPMGVFEFDKFAVGTEAIAKKLAELSGKGVTTIIGGGDSVAAV 437

Query: 61  EKVGVADVMSHISTGGGASLELLEGKELPGVLALDEATPVAV 102
           EKVGVA+VMSHISTGGGASLELLEGKELPGVLALDEATPVAV
Sbjct: 438 EKVGVAEVMSHISTGGGASLELLEGKELPGVLALDEATPVAV 479


>30169.m006296 phosphoglycerate kinase, putative
          Length = 401

 Score =  176 bits (446), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 88/97 (90%), Positives = 94/97 (96%)

Query: 1   VKTFSEALETTKTVIWNGPMGVFEFDKFAVGTEAIAKKLAELSGKGVTTIIGGGDSVAAV 60
           +KTF EAL+TT+T+IWNGPMGVFEFDKFAVGTEAIAKKLAELSGKGVTTIIGGGDSVAAV
Sbjct: 305 IKTFCEALDTTQTIIWNGPMGVFEFDKFAVGTEAIAKKLAELSGKGVTTIIGGGDSVAAV 364

Query: 61  EKVGVADVMSHISTGGGASLELLEGKELPGVLALDEA 97
           EKVG+AD MSHISTGGGASLELLEGK LPGVLALD+A
Sbjct: 365 EKVGLADKMSHISTGGGASLELLEGKPLPGVLALDDA 401