Jatropha Genome Database

JcCB0354521.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0354521.10 - phase: 0 
         (145 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

30162.m001300 pantothenate kinase, putative                           221   6e-59

>30162.m001300 pantothenate kinase, putative
          Length = 367

 Score =  221 bits (564), Expect = 6e-59,   Method: Compositional matrix adjust.
 Identities = 106/119 (89%), Positives = 109/119 (91%)

Query: 1   MESSSELVPFPLLMTPIESNYRACTIPYRFPSDNPRKATPTELQWIDLFYSSIPSFKKRA 60
           MES SE+V FPLL TPIESNYRA TIPYRFPSDNPRK TPTELQWIDLF +SIPSFKKRA
Sbjct: 1   MESESEMVAFPLLTTPIESNYRASTIPYRFPSDNPRKPTPTELQWIDLFLNSIPSFKKRA 60

Query: 61  ENDTTVTDAPAKAEKFAQRYSEILEDLKKDPESHGGPPDCILLCRLREQILRELGFRDI 119
           E D TV DAPA+AEKFAQRYSEILEDLKK PESHGGPPDCILLCRLREQILRELGFRDI
Sbjct: 61  ETDPTVADAPARAEKFAQRYSEILEDLKKGPESHGGPPDCILLCRLREQILRELGFRDI 119