Jatropha Genome Database

JcCB0354231.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0354231.10 + phase: 0 /partial
         (145 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29713.m000179 conserved hypothetical protein                          228   9e-61
29942.m000761 conserved hypothetical protein                          119   7e-28
29869.m001172 conserved hypothetical protein                           87   3e-18
29784.m000356 conserved hypothetical protein                           83   4e-17
29462.m000387 conserved hypothetical protein                           79   7e-16
30146.m003620 conserved hypothetical protein                           63   4e-11
29794.m003464 conserved hypothetical protein                           61   2e-10
29797.m000364 conserved hypothetical protein                           55   1e-08

>29713.m000179 conserved hypothetical protein
          Length = 749

 Score =  228 bits (580), Expect = 9e-61,   Method: Compositional matrix adjust.
 Identities = 117/165 (70%), Positives = 126/165 (76%), Gaps = 22/165 (13%)

Query: 3   QSGSKKEKAVTMKDLSAEREDPSEFITHRAKDFLSSIKDIEHRFFRASESGKEVSRMLEA 62
           QS  +KEKA  MKD+SAEREDPSEFITHRAKDFLSSIKDIE+RF RASESGKEVSRMLEA
Sbjct: 295 QSSLEKEKAAAMKDISAEREDPSEFITHRAKDFLSSIKDIEYRFLRASESGKEVSRMLEA 354

Query: 63  NNIRVGYSETKEPA----------------------EHVTKVITWKRTAXXXXXXXXNPL 100
           NNIRVG+SE +  +                      +HVTKVITWKRTA        NPL
Sbjct: 355 NNIRVGFSEIQGSSSASAFLASLQVCCRGKTTLVTHDHVTKVITWKRTASSRSSSSRNPL 414

Query: 101 ATAARDDVSDSGSDFVEEFCMIAGSHSSTLDRLYAWERKLYDEVK 145
           ATA RDDVSDSGSDF+EEFCMI+GSHSSTLDRLYAWERKLYDEVK
Sbjct: 415 ATATRDDVSDSGSDFLEEFCMISGSHSSTLDRLYAWERKLYDEVK 459


>29942.m000761 conserved hypothetical protein
          Length = 768

 Score =  119 bits (297), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 66/139 (47%), Positives = 78/139 (56%), Gaps = 26/139 (18%)

Query: 33  KDFLSSIKDIEHRFFRASESGKEVSRMLEANNIR-----------------------VGY 69
           KDF SSIKDIE+ F +AS +GKEV RMLEAN +                         G 
Sbjct: 328 KDFFSSIKDIEYLFIKASGAGKEVPRMLEANKLHFRPIVPGKENGSVVSIFFKACFSCGE 387

Query: 70  SETK---EPAEHVTKVITWKRTAXXXXXXXXNPLATAARDDVSDSGSDFVEEFCMIAGSH 126
             ++   EPA++  K +TW RT         NPL + A DD  D   D  E FCMI+GSH
Sbjct: 388 DPSQVQEEPAQNSVKYLTWHRTTSSRSSSSRNPLGSNANDDTGDLTGDIFESFCMISGSH 447

Query: 127 SSTLDRLYAWERKLYDEVK 145
           +STLDRLYAWERKLYDEVK
Sbjct: 448 ASTLDRLYAWERKLYDEVK 466


>29869.m001172 conserved hypothetical protein
          Length = 752

 Score = 87.0 bits (214), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 49/125 (39%), Positives = 73/125 (58%), Gaps = 7/125 (5%)

Query: 28  ITHRAKDFLSSIKDIEHRFFRASESGKEVSRMLEANNIRV--GYSETKEPAEHVTKVITW 85
           I  + ++ L ++KDIE  F RA +SGK+VSRMLEAN + +  G  E KE +    + ITW
Sbjct: 275 IPEKGRELLDALKDIEDHFIRAYDSGKDVSRMLEANRVYLQSGLEEIKENSTKFIQAITW 334

Query: 86  KRTAXXXXXXXXNPLATAARDDVSD---SGSDFVEEF--CMIAGSHSSTLDRLYAWERKL 140
           +R+           L  ++    ++     +D  +++   M +GSHS TL RLYAWE+KL
Sbjct: 335 QRSTSSSKPSSCKSLVASSSKSTTNWTEYKNDLFDDYGGMMDSGSHSLTLGRLYAWEKKL 394

Query: 141 YDEVK 145
           Y+EVK
Sbjct: 395 YEEVK 399


>29784.m000356 conserved hypothetical protein
          Length = 711

 Score = 83.2 bits (204), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 48/118 (40%), Positives = 71/118 (60%), Gaps = 4/118 (3%)

Query: 32  AKDFLSSIKDIEHRFFRASESGKEVSRMLEANNIRV--GYSETKEPAEHVTKVITWKRTA 89
            ++ L ++KDIE  F R+ +SG ++SRMLEAN + +  G  E KE +  + + ITW R+ 
Sbjct: 242 GRELLEALKDIEDHFLRSYDSGLDISRMLEANRVPLQSGLEEIKESSNKLIRSITWNRST 301

Query: 90  XXXXXXXXNPLATAARDDV--SDSGSDFVEEFCMIAGSHSSTLDRLYAWERKLYDEVK 145
                   + L + + +    +D  +D  ++F M AGSHS TL RLYAWE+KLY EVK
Sbjct: 302 SSRSSSSKSLLTSTSTNSSVWTDFKADLFDDFGMEAGSHSLTLGRLYAWEKKLYQEVK 359


>29462.m000387 conserved hypothetical protein
          Length = 765

 Score = 79.3 bits (194), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 47/141 (33%), Positives = 81/141 (57%), Gaps = 3/141 (2%)

Query: 8   KEKAVTMKDLSAEREDP--SEFITHRAKDFLSSIKDIEHRFFRASESGKEVSRMLEANNI 65
           + + +++ D  A+ E P  + ++  R       IKD+E +F  A  S KEVS +LE++  
Sbjct: 308 RSQEMSVGDGEAKAETPAFTVYVNRRPTSMSEVIKDLEDQFIMACNSAKEVSSLLESSKA 367

Query: 66  RVGYSETKEPA-EHVTKVITWKRTAXXXXXXXXNPLATAARDDVSDSGSDFVEEFCMIAG 124
           +     ++  A + +  V  ++  +           ++++RD+  +S SDF EE C+++G
Sbjct: 368 QYSSMSSELTAMKMLNPVALFRSASSRSSSSRFLVNSSSSRDEGYESNSDFSEESCILSG 427

Query: 125 SHSSTLDRLYAWERKLYDEVK 145
           SH STLDRLYAWE+KLY+EV+
Sbjct: 428 SHQSTLDRLYAWEKKLYEEVR 448


>30146.m003620 conserved hypothetical protein
          Length = 714

 Score = 63.2 bits (152), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 39/117 (33%), Positives = 61/117 (52%), Gaps = 21/117 (17%)

Query: 34  DFLSSIKDIEHRFFRASESGKEVSRMLEANNIRV--GYSETKEPAEH---VTKVITWKRT 88
           + +    D++  F +ASES  EVS+MLEA  +     +++ +   +H   V +VITW R+
Sbjct: 278 NLIQIFADLDDHFLKASESAHEVSKMLEATRLHYHSNFADNRGHIDHSKRVMRVITWNRS 337

Query: 89  AXXXXXXXXNPLATAARDDVSDSGSDFVEEFCMIAGSHSSTLDRLYAWERKLYDEVK 145
                             DV D   +F EE  +   +H++ LD++ AWE+KLYDEVK
Sbjct: 338 FK-------------GLPDVGDGKDNFEEEEHL---THATVLDKMLAWEKKLYDEVK 378


>29794.m003464 conserved hypothetical protein
          Length = 728

 Score = 60.8 bits (146), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 36/117 (30%), Positives = 62/117 (52%), Gaps = 21/117 (17%)

Query: 34  DFLSSIKDIEHRFFRASESGKEVSRMLEANNIRV--GYSETKEPAEH---VTKVITWKRT 88
           + +  +K+I+  F +ASE+ +EVS+MLEA  +     +++ +   +H   V +VITW R+
Sbjct: 286 NLMEVLKEIDDHFLKASENAQEVSKMLEATRLHYHSNFADNRGYVDHSARVMRVITWNRS 345

Query: 89  AXXXXXXXXNPLATAARDDVSDSGSDFVEEFCMIAGSHSSTLDRLYAWERKLYDEVK 145
                     P     +D++     +          +H++ LD+L AWE+KLYDEVK
Sbjct: 346 FRGV------PNGEGGKDELDSEDYE----------THATVLDKLLAWEKKLYDEVK 386


>29797.m000364 conserved hypothetical protein
          Length = 837

 Score = 55.1 bits (131), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 36/105 (34%), Positives = 58/105 (55%), Gaps = 9/105 (8%)

Query: 41  DIEHRFFRASESGKEVSRMLEANNIRVGYSETKEPAEHVTKVITWKRTAXXXXXXXXNPL 100
           +I+ +F RASESG+E++ MLE    R+ Y       +HV+K++  +  A         P 
Sbjct: 420 EIKIQFERASESGQEIAMMLEVG--RLPYHR-----KHVSKML--QGVAPSLSVVSSQPS 470

Query: 101 ATAARDDVSDSGSDFVEEFCMIAGSHSSTLDRLYAWERKLYDEVK 145
            + + D  S +  D  E+  + +   SSTL +LY WE+KLY++VK
Sbjct: 471 TSKSTDASSSTNLDIDEDLVIRSKKLSSTLQKLYLWEKKLYNDVK 515