Jatropha Genome Database
- JcCB0353461.10
BLASTP 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= JcCB0353461.10 - phase: 2 /partial
(279 letters)
Database: castor_wgs_0.1_aa
31,221 sequences; 10,419,776 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
29848.m004493 Salt-tolerance protein, putative 423 e-119
27506.m000051 zinc finger protein, putative 227 5e-60
29496.m000135 zinc finger protein, putative 176 1e-44
28207.m000104 transcription factor, putative 66 1e-11
30008.m000813 conserved hypothetical protein 65 4e-11
27524.m000294 conserved hypothetical protein 62 2e-10
30131.m007007 transcription factor, putative 62 2e-10
30190.m011250 conserved hypothetical protein 62 4e-10
29647.m002019 hypothetical protein 60 1e-09
30199.m000884 hypothetical protein 59 2e-09
30128.m009041 hypothetical protein 59 2e-09
30130.m000280 sensory transduction histidine kinase, putative 59 3e-09
29866.m000621 conserved hypothetical protein 58 5e-09
30156.m001737 conserved hypothetical protein 57 8e-09
30138.m004044 sensory transduction histidine kinase, putative 57 9e-09
29758.m000642 Two-component response regulator ARR2, putative 57 1e-08
30169.m006339 conserved hypothetical protein 56 2e-08
30039.m000233 conserved hypothetical protein 55 3e-08
30076.m004450 sensory transduction histidine kinase, putative 55 3e-08
29805.m001503 sensory transduction histidine kinase, putative 55 4e-08
30169.m006492 conserved hypothetical protein 55 5e-08
30198.m000843 CIL, putative 54 9e-08
30174.m009047 zinc finger protein, putative 54 1e-07
29633.m000912 hypothetical protein 51 6e-07
30005.m001282 transcription factor, putative 50 2e-06
29838.m001723 hypothetical protein 48 4e-06
>29848.m004493 Salt-tolerance protein, putative
Length = 332
Score = 423 bits (1087), Expect = e-119, Method: Compositional matrix adjust.
Identities = 217/282 (76%), Positives = 235/282 (83%), Gaps = 13/282 (4%)
Query: 1 CKADAAALCVTCDRDIHSANPLARRHERVPVTPFYDSVSSASGVKPNAINFLDDRHFSDV 60
CKADAAALCVTCDRDIHSANPLARRHERVP+TPFYDSVSS + KPNA+N LDDR+FSDV
Sbjct: 61 CKADAAALCVTCDRDIHSANPLARRHERVPITPFYDSVSSVNN-KPNAVNLLDDRYFSDV 119
Query: 61 DGDA-DVSREEAEAASWLLPNPPNPKVMESPDLNTGQYVFSEMEPYLDLDYGPVDPKLES 119
DGDA DVSREEAEAASWLLPNPPN K++E+ D NTGQYVFS+M+PYLDLDYGP DPKLE+
Sbjct: 120 DGDAADVSREEAEAASWLLPNPPNTKLVENSDPNTGQYVFSDMDPYLDLDYGPGDPKLEA 179
Query: 120 QEQNSSGTDGVVPVQ-SKSVQTPLVNDHCFELDFSGSKAFAYGYKAQCLXXXXXXXXXXX 178
QEQNSSGTDGVVPV+ SK+VQ P VND+CFELDF+GSK F YGY AQCL
Sbjct: 180 QEQNSSGTDGVVPVKSSKNVQAPFVNDNCFELDFTGSKPFPYGYNAQCLSNSVSSSSLDV 239
Query: 179 XXXPDGGNMVDISNPYSRSVSNGIESANQTVQLSAVDREARVLRYREKRKNRKFEKTIRY 238
PDGG DISNPYS+S ++ QLSAVDREARVLRYREKRKNRKFEKTIRY
Sbjct: 240 GVVPDGG---DISNPYSKSTMESVQ------QLSAVDREARVLRYREKRKNRKFEKTIRY 290
Query: 239 ASRKAYAETRPRIKGRFAKRTDTEVEVDR-SSIYGFGVVPSF 279
ASRKAYAETRPRIKGRFAKRTD +VE DR SSI FGVVPSF
Sbjct: 291 ASRKAYAETRPRIKGRFAKRTDIDVEADRSSSINAFGVVPSF 332
>27506.m000051 zinc finger protein, putative
Length = 388
Score = 227 bits (578), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 141/321 (43%), Positives = 189/321 (58%), Gaps = 51/321 (15%)
Query: 1 CKADAAALCVTCDRDIHSANPLARRHERVPVTPFYDSVSSASGVKPNAINFLDDRHFSDV 60
CKADAAALCVTCD DIHSANPLARRHERVPV PF+DS S VK + NFL +
Sbjct: 77 CKADAAALCVTCDADIHSANPLARRHERVPVEPFFDSAGSI--VKSSPFNFLVPTDHNGA 134
Query: 61 DGDADVSREE-----AEAASWLLPNPPNPKV------MESPDLNTGQ--------YVFSE 101
G A + ++ E SWLLPNP + + +E+ ++ +G F+E
Sbjct: 135 -GSAAFNHQQHEDDDVEGVSWLLPNPSSTMINSKLGGIENHEMKSGHGGGGGSGDLFFTE 193
Query: 102 MEPYLDLDYGPVDPKLESQEQNSSGTDGVVPVQ----SKSVQTPLVN-DHCFELDFSGSK 156
M+P+LDL++ ++ +S+ D VVPVQ + + P++N D C+++DF +K
Sbjct: 194 MDPFLDLEFH------QNNNHSSAANDSVVPVQITKPAAASSIPVMNNDICYDIDFCRTK 247
Query: 157 AFAYGYKAQCLXXXXXXXXXXXXXXPDGGNMVDISNPYSRSVSNGIE--------SANQT 208
++ Y Q L PDG + DIS P+ R+++ + S NQ
Sbjct: 248 LSSFNYPTQSLSQSVSSSSLDVGVVPDGSSTSDISYPFGRNMNTCTDPSGPISGNSTNQA 307
Query: 209 VQLSAVDREARVLRYREKRKNRKFEKTIRYASRKAYAETRPRIKGRFAKRTDTEVEVDR- 267
Q+ ++REARVLRYREKRKNRKFEKTIRYASRKAYAETRPRIKGRFAKRT+ + ++DR
Sbjct: 308 AQMCGINREARVLRYREKRKNRKFEKTIRYASRKAYAETRPRIKGRFAKRTEIDTDMDRL 367
Query: 268 ----SSI-----YGFGVVPSF 279
SS+ +GVVP+F
Sbjct: 368 YNSPSSVSYLGDAQYGVVPTF 388
>29496.m000135 zinc finger protein, putative
Length = 378
Score = 176 bits (446), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 136/310 (43%), Positives = 163/310 (52%), Gaps = 36/310 (11%)
Query: 1 CKADAAALCVTCDRDIHSANPLARRHERVPVTPFYDSVSS--ASGVKPNAINFLDDRHFS 58
CKADAA+LC TCD DIHSANPLARRH+RVP+ P + A V +D +
Sbjct: 74 CKADAASLCATCDADIHSANPLARRHQRVPIHPISGCLHGPQAGPVGGGGETTTEDMFMT 133
Query: 59 DVDGDADVSREEAEAASWLLPNPPNPKVMESPDLNTGQYVFS-EMEPYLDLDYGPVDPKL 117
+ D EE EAASWLL NP K S + T ++F E+E YLDL +
Sbjct: 134 EDGEDGVGEEEEDEAASWLLLNPV--KNGNSQNNGTNGFLFGGEVEEYLDLFEYNSNSCG 191
Query: 118 ESQ----EQNSSGT--------DGVVPVQ-----SKSVQTPLVNDHCFELDFSGSKAFAY 160
E+Q Q+ SGT D VVPV+ K ++ L+F SKA AY
Sbjct: 192 ENQYADNHQHYSGTVHQKSHEGDSVVPVRCGDGAGKDHVHQQYHNFQLGLEFESSKA-AY 250
Query: 161 GYKAQCLXXXXXXXXXXXXXXPDGGNMVDISNPYSRSVSNGIE-----SANQTVQLSAVD 215
Y + PD M + S + R I+ QLS D
Sbjct: 251 SYNGS-ISHSVSISPMDVGVVPDS-TMSEASISHPRPPKGTIDLFSGPPIQMPSQLSPRD 308
Query: 216 REARVLRYREKRKNRKFEKTIRYASRKAYAETRPRIKGRFAKRTDTEVEVDR------SS 269
REARVLRYREK+K RKFEKTIRYASRKAYAETRPRIKGRFAKRTD EVEVD+ +
Sbjct: 309 REARVLRYREKKKTRKFEKTIRYASRKAYAETRPRIKGRFAKRTDVEVEVDQIFSTALMA 368
Query: 270 IYGFGVVPSF 279
G+G+VPSF
Sbjct: 369 ETGYGIVPSF 378
>28207.m000104 transcription factor, putative
Length = 430
Score = 66.2 bits (160), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 31/44 (70%), Positives = 34/44 (77%)
Query: 216 REARVLRYREKRKNRKFEKTIRYASRKAYAETRPRIKGRFAKRT 259
REARVLRY+EKR+ R F K IRY RK AE RPR+KGRF KRT
Sbjct: 375 REARVLRYKEKRRTRLFSKKIRYEVRKLNAEKRPRMKGRFVKRT 418
>30008.m000813 conserved hypothetical protein
Length = 428
Score = 64.7 bits (156), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 30/70 (42%), Positives = 45/70 (64%)
Query: 191 SNPYSRSVSNGIESANQTVQLSAVDREARVLRYREKRKNRKFEKTIRYASRKAYAETRPR 250
S P + +S+ +SA + +LS R+ ++ RY +KR R F K I+YA RK A++RPR
Sbjct: 305 STPLTSEISSLEDSAFKVGKLSVEQRKEKIHRYMKKRNERNFSKKIKYACRKTLADSRPR 364
Query: 251 IKGRFAKRTD 260
++GRFAK D
Sbjct: 365 VRGRFAKNDD 374
>27524.m000294 conserved hypothetical protein
Length = 468
Score = 62.4 bits (150), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 30/48 (62%), Positives = 34/48 (70%)
Query: 211 LSAVDREARVLRYREKRKNRKFEKTIRYASRKAYAETRPRIKGRFAKR 258
++ REARV RYREKR+ R F K IRY RK AE RPR+KGRF KR
Sbjct: 406 MAGGGREARVSRYREKRRTRLFSKKIRYEVRKLNAEKRPRMKGRFVKR 453
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 21/29 (72%), Positives = 23/29 (79%)
Query: 1 CKADAAALCVTCDRDIHSANPLARRHERV 29
C AD A LC +CD +HSANPLARRHERV
Sbjct: 31 CAADDAFLCQSCDSSVHSANPLARRHERV 59
>30131.m007007 transcription factor, putative
Length = 426
Score = 62.4 bits (150), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 29/63 (46%), Positives = 45/63 (71%)
Query: 199 SNGIESANQTVQLSAVDREARVLRYREKRKNRKFEKTIRYASRKAYAETRPRIKGRFAKR 258
++ +E++ V+L A +R +LRY EK+K R+++K IRY SRKA A+TR R+KGRF K
Sbjct: 363 TDDMETSKADVELFAQNRGNAMLRYMEKKKTRRYDKHIRYESRKARADTRERVKGRFVKA 422
Query: 259 TDT 261
++
Sbjct: 423 SEN 425
>30190.m011250 conserved hypothetical protein
Length = 349
Score = 61.6 bits (148), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 32/64 (50%), Positives = 43/64 (67%), Gaps = 1/64 (1%)
Query: 199 SNGIESANQTV-QLSAVDREARVLRYREKRKNRKFEKTIRYASRKAYAETRPRIKGRFAK 257
S+ E AN V + SA +R+ R+ +YR KR R F KTI+YA RK A+ RPRI+GRFA+
Sbjct: 233 SSFTEEANFKVGRYSAEERKDRISKYRAKRNQRNFTKTIKYACRKTLADNRPRIRGRFAR 292
Query: 258 RTDT 261
+T
Sbjct: 293 NDET 296
>29647.m002019 hypothetical protein
Length = 411
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 26/47 (55%), Positives = 39/47 (82%)
Query: 211 LSAVDREARVLRYREKRKNRKFEKTIRYASRKAYAETRPRIKGRFAK 257
+++ +R++ + RY+EKRK R+++K IRY SRKA AE+R RI+GRFAK
Sbjct: 362 INSQERDSAISRYKEKRKTRRYDKHIRYESRKARAESRTRIRGRFAK 408
>30199.m000884 hypothetical protein
Length = 58
Score = 59.3 bits (142), Expect = 2e-09, Method: Composition-based stats.
Identities = 28/46 (60%), Positives = 34/46 (73%)
Query: 214 VDREARVLRYREKRKNRKFEKTIRYASRKAYAETRPRIKGRFAKRT 259
+ REA VLRY+EKR+ R F K IRY RK A+ RPR+KGRF KR+
Sbjct: 12 IRREASVLRYKEKRQTRLFSKKIRYQVRKLNADKRPRLKGRFIKRS 57
>30128.m009041 hypothetical protein
Length = 477
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 27/48 (56%), Positives = 36/48 (75%)
Query: 213 AVDREARVLRYREKRKNRKFEKTIRYASRKAYAETRPRIKGRFAKRTD 260
A +R + Y+EKRKNR+++K IRY SRKA A+TR R+KGRF K +D
Sbjct: 426 AKNRGIAMQHYKEKRKNRRYDKHIRYESRKARADTRKRVKGRFVKASD 473
>30130.m000280 sensory transduction histidine kinase, putative
Length = 807
Score = 58.5 bits (140), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 25/44 (56%), Positives = 34/44 (77%)
Query: 216 REARVLRYREKRKNRKFEKTIRYASRKAYAETRPRIKGRFAKRT 259
REA + ++R+KRK R FEK +RY SRK AE RPR+KG+F ++T
Sbjct: 708 REAALSKFRQKRKERCFEKRVRYQSRKRLAEQRPRVKGQFVRQT 751
>29866.m000621 conserved hypothetical protein
Length = 667
Score = 57.8 bits (138), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 25/55 (45%), Positives = 38/55 (69%)
Query: 213 AVDREARVLRYREKRKNRKFEKTIRYASRKAYAETRPRIKGRFAKRTDTEVEVDR 267
++ REA + ++R KRK+R +EK +RY SRK AE RPR+KG+F ++ E D+
Sbjct: 613 SIQREAALNKFRLKRKDRCYEKKVRYESRKKLAEQRPRVKGQFVRQAHPSAETDQ 667
>30156.m001737 conserved hypothetical protein
Length = 419
Score = 57.4 bits (137), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 26/42 (61%), Positives = 31/42 (73%)
Query: 216 REARVLRYREKRKNRKFEKTIRYASRKAYAETRPRIKGRFAK 257
R+ +RY EK+K R F K IRYASRKA A+TR R+KGRF K
Sbjct: 361 RDKAKMRYNEKKKTRTFSKQIRYASRKARADTRKRVKGRFVK 402
>30138.m004044 sensory transduction histidine kinase, putative
Length = 550
Score = 57.0 bits (136), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 46/64 (71%), Gaps = 2/64 (3%)
Query: 204 SANQTVQLSAVDR-EARVLRYREKRKNRKFEKTIRYASRKAYAETRPRIKGRFAKRTDTE 262
S++ V++ +DR EA ++++R+KRK R F+K IRY +RK AE RPR++G+F ++ +
Sbjct: 454 SSSPDVKIKKLDRREAALMKFRQKRKERCFDKKIRYVNRKKLAERRPRVRGQFVRKLNG- 512
Query: 263 VEVD 266
V VD
Sbjct: 513 VNVD 516
>29758.m000642 Two-component response regulator ARR2, putative
Length = 659
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 23/46 (50%), Positives = 34/46 (73%)
Query: 213 AVDREARVLRYREKRKNRKFEKTIRYASRKAYAETRPRIKGRFAKR 258
+ REA + ++R+KRK R FEK +RY SRK AE RPR++G+F ++
Sbjct: 602 SAQREAALNKFRQKRKERCFEKKVRYQSRKKLAEQRPRVRGQFVRQ 647
>30169.m006339 conserved hypothetical protein
Length = 277
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 27/59 (45%), Positives = 39/59 (66%), Gaps = 1/59 (1%)
Query: 203 ESANQTV-QLSAVDREARVLRYREKRKNRKFEKTIRYASRKAYAETRPRIKGRFAKRTD 260
E AN V + + +R+ R+LRY +KR R F KTI+YA RK A+ R R++GRFA+ +
Sbjct: 167 EHANMKVGRYTVEERKDRILRYLKKRNQRNFNKTIKYACRKTLADRRVRVRGRFARNNE 225
>30039.m000233 conserved hypothetical protein
Length = 140
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 25/57 (43%), Positives = 38/57 (66%)
Query: 206 NQTVQLSAVDREARVLRYREKRKNRKFEKTIRYASRKAYAETRPRIKGRFAKRTDTE 262
++ + S +++ R+ RYR KR R F K I+YA RK A++RPRI+GRFA+ + E
Sbjct: 48 SKACKYSPEEKKERIERYRSKRTQRNFNKKIKYACRKTLADSRPRIRGRFARNDEIE 104
>30076.m004450 sensory transduction histidine kinase, putative
Length = 697
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 24/50 (48%), Positives = 35/50 (70%)
Query: 216 REARVLRYREKRKNRKFEKTIRYASRKAYAETRPRIKGRFAKRTDTEVEV 265
REA + ++R KRK+R +EK +RY SRK AE RPR+KG+F ++ + V
Sbjct: 641 REAALTKFRLKRKDRCYEKKVRYQSRKRLAELRPRVKGQFVRQVQNDAPV 690
>29805.m001503 sensory transduction histidine kinase, putative
Length = 762
Score = 55.1 bits (131), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 22/44 (50%), Positives = 32/44 (72%)
Query: 216 REARVLRYREKRKNRKFEKTIRYASRKAYAETRPRIKGRFAKRT 259
RE + ++R+KRK R F K +RY SRK AE RPR++G+F ++T
Sbjct: 708 REVALTKFRQKRKERCFRKKVRYQSRKRLAEQRPRVRGQFVRQT 751
>30169.m006492 conserved hypothetical protein
Length = 283
Score = 54.7 bits (130), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 24/51 (47%), Positives = 36/51 (70%)
Query: 213 AVDREARVLRYREKRKNRKFEKTIRYASRKAYAETRPRIKGRFAKRTDTEV 263
A R ++ RYR K+ R F + I+YA RKA A+++PR++GRFAK D++V
Sbjct: 229 AEGRMEKLSRYRNKKTKRNFGRKIKYACRKALADSQPRVRGRFAKTEDSDV 279
>30198.m000843 CIL, putative
Length = 397
Score = 53.9 bits (128), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 32/73 (43%), Positives = 43/73 (58%), Gaps = 10/73 (13%)
Query: 189 DISNPYSRSVSNGIESANQ-TVQLSAVD--------REARVLRYREKRKNRKFEKTIRYA 239
D +P+S +S G E N + +L+ +D REA VLRY+EKR+ R F K IRY
Sbjct: 322 DKGSPFSEEIS-GSEGGNDVSARLAQIDLFSENGGVREASVLRYKEKRRTRLFSKKIRYQ 380
Query: 240 SRKAYAETRPRIK 252
RK A+ RPR+K
Sbjct: 381 VRKVNADQRPRMK 393
>30174.m009047 zinc finger protein, putative
Length = 177
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/84 (38%), Positives = 46/84 (54%), Gaps = 15/84 (17%)
Query: 1 CKADAAALCVTCDRDIHSANPLARRHERVPVTPFYDSVSSASGVKP-NAINFLDDRH--F 57
C+ADAA LC+ CD +IH ANPL RH RVP++P G+ P ++ +LD
Sbjct: 66 CQADAANLCINCDTEIHLANPLPCRHNRVPISP-------PPGIVPTSSTTYLDKSQVPL 118
Query: 58 SDVDGDADVSR-----EEAEAASW 76
D + +A ++ E+ EA SW
Sbjct: 119 RDTENEAMANKSIEELEQDEADSW 142
>29633.m000912 hypothetical protein
Length = 276
Score = 50.8 bits (120), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 24/37 (64%), Positives = 28/37 (75%)
Query: 216 REARVLRYREKRKNRKFEKTIRYASRKAYAETRPRIK 252
REA VLRY+EKR++R F K IRY RK AE RPR+K
Sbjct: 235 REASVLRYKEKRQSRLFSKRIRYEVRKLNAEKRPRLK 271
>30005.m001282 transcription factor, putative
Length = 414
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 23/55 (41%), Positives = 34/55 (61%), Gaps = 7/55 (12%)
Query: 1 CKADAAALCVTCDRDIHSANPLARRHERVPVTPFYDSVSSASGVKPNAINFLDDR 55
C++DAA LC++CDR++HSAN L+RRH R + +S +P I D+R
Sbjct: 17 CRSDAACLCLSCDRNVHSANALSRRHSRTLLCERCNS-------QPALIRCADER 64
>29838.m001723 hypothetical protein
Length = 313
Score = 48.1 bits (113), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 37/68 (54%), Gaps = 2/68 (2%)
Query: 193 PYSRSVSNGIESANQTVQLSAVDREARVLRYREKRKNRKFEKTIRYASRKAYAETRPRIK 252
PY S G ++ +LS R A ++R+REKRK R FEK IRY RK A+ R
Sbjct: 56 PYCTFQSLGDSDTSRESKLSR--RIASLVRFREKRKERCFEKKIRYTCRKEVAQRMHRKN 113
Query: 253 GRFAKRTD 260
G+FA D
Sbjct: 114 GQFASLKD 121