Jatropha Genome Database

JcCB0351641.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0351641.10 + phase: 0 /partial
         (130 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

27383.m000158 catalytic, putative                                     211   7e-56

>27383.m000158 catalytic, putative
          Length = 420

 Score =  211 bits (537), Expect = 7e-56,   Method: Compositional matrix adjust.
 Identities = 104/133 (78%), Positives = 116/133 (87%), Gaps = 3/133 (2%)

Query: 1   MIATSMAMLQHVCSVPLARAVRQPHSFTIVSSRKLRTTSSAVS---PPRTSHVDPRVLLG 57
           MI TSMAML HVCS+P+ARA+ +P S T +SSR L T +SA +   PPR S VDP VLLG
Sbjct: 1   MITTSMAMLSHVCSLPIARAIHRPLSLTAISSRSLSTATSATAAASPPRGSQVDPHVLLG 60

Query: 58  MSEPELQQLANDFGQQSYRGKQLHHLIYERKVKEIQDFSQLPQAFRHELEEAGWKIGRSP 117
           MSEPELQQLA DFGQQSYRGKQLHHLIY+RKVKEIQDFSQLPQAFR+EL+EAGW++GRSP
Sbjct: 61  MSEPELQQLAADFGQQSYRGKQLHHLIYQRKVKEIQDFSQLPQAFRNELQEAGWRVGRSP 120

Query: 118 IYRTVTAADGTVK 130
           IYRTVTAADGTVK
Sbjct: 121 IYRTVTAADGTVK 133