Jatropha Genome Database

JcCB0343111.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0343111.10 - phase: 0 /partial
         (302 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

30170.m014170 conserved hypothetical protein                          317   6e-87
28208.m000062 Receptor expression-enhancing protein, putative         212   1e-55
28324.m000398 Receptor expression-enhancing protein, putative         148   3e-36
29851.m002437 pentatricopeptide repeat-containing protein, putative    71   5e-13
29646.m001069 Receptor expression-enhancing protein, putative          60   1e-09
30147.m014111 Protein HVA22, putative                                  52   4e-07
30147.m014467 Protein HVA22, putative                                  52   5e-07

>30170.m014170 conserved hypothetical protein
          Length = 254

 Score =  317 bits (811), Expect = 6e-87,   Method: Compositional matrix adjust.
 Identities = 174/290 (60%), Positives = 188/290 (64%), Gaps = 40/290 (13%)

Query: 15  MIFGYAYPAYECYKTVEKNKPEIEHLRFWCQYWILVAVLTVCERIGDAFISWVPMYSEAK 74
           MIFGYAYPAYECYKTVEKNKPEIE LRFWCQYWILVAVLT                    
Sbjct: 3   MIFGYAYPAYECYKTVEKNKPEIEQLRFWCQYWILVAVLT-------------------- 42

Query: 75  LAFIIYLWYPKTKGTTYVYDSFFKPYVAKHENEIDRSLLELRTRAGDMFILYWQRAASYG 134
                        GTTYVYDSFF+PYVAKHENEIDR+LLELRTRAGDM +LYWQRAASYG
Sbjct: 43  -------------GTTYVYDSFFRPYVAKHENEIDRNLLELRTRAGDMAVLYWQRAASYG 89

Query: 135 QTRVFDILQYVASQSTTPRPRAAQPQQGTRTRQPANAPTRQPSTTSNCQPAVQQXXXXXX 194
           QTR+F+ILQYVA+QS TPRPR  QPQQG R RQPA A  RQ S TSN QPAV Q      
Sbjct: 90  QTRIFEILQYVAAQS-TPRPRPTQPQQGVRARQPATATNRQSSNTSNRQPAVAQPENEEP 148

Query: 195 XXXXXXXXXXRHQAEVNEEVIXXXXXXXXXXXXXXXXXXXXTAPSNAQKTNAS-ETSSQP 253
                     +H  +V EEV                        S+ QK +A  ETSSQP
Sbjct: 149 PSPTSSTSSSQHHTDVAEEV----REAPVPPAAASNALKAPAGASSVQKVDAGPETSSQP 204

Query: 254 SSSKAEAMEIEAEPSK-NENANPPPKDTNMDEAIRRTSARLRKSRSAPKT 302
           SS+KAE M+IEA PS  NEN NPPPK+TNMDEAIR T ARLRKSRS PK+
Sbjct: 205 SSTKAEVMQIEAAPSSTNENENPPPKETNMDEAIRVTRARLRKSRSGPKS 254


>28208.m000062 Receptor expression-enhancing protein, putative
          Length = 199

 Score =  212 bits (540), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 91/135 (67%), Positives = 112/135 (82%)

Query: 15  MIFGYAYPAYECYKTVEKNKPEIEHLRFWCQYWILVAVLTVCERIGDAFISWVPMYSEAK 74
           MIFGYAYPAYEC+K VEK + E+E L FWCQYWILVA+LTVCER+GD  +SW+PMYSEAK
Sbjct: 12  MIFGYAYPAYECFKVVEKTESEMEQLLFWCQYWILVAMLTVCERVGDNLLSWLPMYSEAK 71

Query: 75  LAFIIYLWYPKTKGTTYVYDSFFKPYVAKHENEIDRSLLELRTRAGDMFILYWQRAASYG 134
           LAF IYLW+ KT+GT YVY+ FF+P+V KHE EID  LLELR   G M ++YW++AA YG
Sbjct: 72  LAFFIYLWHQKTRGTMYVYNCFFQPFVRKHETEIDDRLLELRVEGGRMALVYWEKAAIYG 131

Query: 135 QTRVFDILQYVASQS 149
           Q ++F+ILQ+ +SQS
Sbjct: 132 QAKLFEILQFASSQS 146


>28324.m000398 Receptor expression-enhancing protein, putative
          Length = 218

 Score =  148 bits (373), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 64/102 (62%), Positives = 78/102 (76%)

Query: 48  ILVAVLTVCERIGDAFISWVPMYSEAKLAFIIYLWYPKTKGTTYVYDSFFKPYVAKHENE 107
           I++A+LTV ERIGD FISW+PMY E KLAF IYLWYPKTKGT Y+Y+   +P+V+KHE +
Sbjct: 8   IIIALLTVVERIGDIFISWLPMYGEIKLAFFIYLWYPKTKGTGYIYEVLLRPFVSKHETD 67

Query: 108 IDRSLLELRTRAGDMFILYWQRAASYGQTRVFDILQYVASQS 149
           IDR LLELR RA D  I YWQ     GQ+  F IL+Y+A+QS
Sbjct: 68  IDRKLLELRARAWDFAIYYWQNCTKLGQSTFFQILEYLAAQS 109


>29851.m002437 pentatricopeptide repeat-containing protein, putative
          Length = 1157

 Score = 71.2 bits (173), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 38/151 (25%), Positives = 66/151 (43%), Gaps = 3/151 (1%)

Query: 18   GYAYPAYECYKTVEKNKPEIEHLRFWCQYWILVAVLTVCERIGDAFISWVPMYSEAKLAF 77
            G   P Y  +K +E N+  I+  + W  YW      +V E   D  +SW P+Y   K AF
Sbjct: 1004 GVVLPVYSTFKAIE-NRDLIDQQK-WLLYWAAYGTFSVAEVFADKVLSWFPLYYHVKFAF 1061

Query: 78   IIYLWYPKTKGTTYVYDSFFKPYVAKHENEIDRSLLELRTRAGDMFILYWQRAASYGQTR 137
            +++L  P   G   +Y S  +P++ +H+  +D+ +  L  R  D F++  Q    + +  
Sbjct: 1062 LVWLQLPSVNGARQLYMSHLRPFLLRHQARLDQ-VTGLVYREMDKFVITHQAEFKFVKAL 1120

Query: 138  VFDILQYVASQSTTPRPRAAQPQQGTRTRQP 168
               +L  V      P  +  +P   +    P
Sbjct: 1121 FLKVLASVHHMVQHPADQGRRPANNSVEGSP 1151


>29646.m001069 Receptor expression-enhancing protein, putative
          Length = 192

 Score = 60.5 bits (145), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 27/92 (29%), Positives = 44/92 (47%), Gaps = 2/92 (2%)

Query: 18  GYAYPAYECYKTVEKNKPEIEHLRFWCQYWILVAVLTVCERIGDAFISWVPMYSEAKLAF 77
           G   P Y   K +E+ K + E  + W  YW      ++ E   D  + W PMY   K AF
Sbjct: 35  GVVLPVYSTLKAIER-KDQNEQQK-WLIYWAAYGSFSLVEVFTDKLLYWFPMYYHVKFAF 92

Query: 78  IIYLWYPKTKGTTYVYDSFFKPYVAKHENEID 109
           +++L  P T G   +Y +  +P+  +H+  +D
Sbjct: 93  LVWLQLPSTDGAKQIYTNHLRPFFLRHQARVD 124


>30147.m014111 Protein HVA22, putative
          Length = 171

 Score = 51.6 bits (122), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 28/90 (31%), Positives = 45/90 (50%), Gaps = 2/90 (2%)

Query: 20  AYPAYECYKTVEKNKPEIEHLRFWCQYWILVAVLTVCERIGDAFISWVPMYSEAKLAFII 79
            YP Y   + +E   P I+  + W  YW+L +++T+ E      I W+P++S AKL    
Sbjct: 27  VYPLYASIRAIETKSP-IDDQQ-WLTYWVLYSMITLFELTFAKVIEWIPIWSYAKLIVTC 84

Query: 80  YLWYPKTKGTTYVYDSFFKPYVAKHENEID 109
           +L  P   G  YVY+ F +P     +  I+
Sbjct: 85  WLVIPYFSGAAYVYEHFVRPLFVNPQQTIN 114


>30147.m014467 Protein HVA22, putative
          Length = 114

 Score = 51.6 bits (122), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 19/68 (27%), Positives = 38/68 (55%)

Query: 43  WCQYWILVAVLTVCERIGDAFISWVPMYSEAKLAFIIYLWYPKTKGTTYVYDSFFKPYVA 102
           W  YWIL + LT+ E +  + + W+P++   KL  + +L  P+ +G  ++Y+ + +  + 
Sbjct: 14  WLAYWILYSFLTLTEMVLQSILEWIPIWYTVKLVLVAWLVLPQFRGAAFIYEKYVRENLK 73

Query: 103 KHENEIDR 110
           K+    DR
Sbjct: 74  KYRGGRDR 81