Jatropha Genome Database

JcCB0341751.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0341751.10 - phase: 0 
         (341 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29801.m003085 Methylthioribose kinase, putative                       476   e-135

>29801.m003085 Methylthioribose kinase, putative
          Length = 424

 Score =  476 bits (1225), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 225/291 (77%), Positives = 244/291 (83%)

Query: 1   MAFSEFRPLDEKALIEYIKATPVLSNKIGNEFDNLEVKEVGDGNLNFVYIVIGSAGSFVI 60
           MAFSEFRPLDEK+LIEYI+ TPVL+NKIG++FD+L++KEVGDGNLNFVYIV+ S GSFVI
Sbjct: 1   MAFSEFRPLDEKSLIEYIRGTPVLANKIGDKFDDLKIKEVGDGNLNFVYIVVSSDGSFVI 60

Query: 61  KQALPYIRLIGESWPMTKERAYFEGRALKEHGKLSPEHVPEVYHFDRTMSLIAMRYLEPP 120
           KQALPYIR IGESWPMTKERAYFE R LKEHG+L PEHVP+VYHFD TM LI MRYLEPP
Sbjct: 61  KQALPYIRCIGESWPMTKERAYFEARTLKEHGRLCPEHVPDVYHFDHTMCLIGMRYLEPP 120

Query: 121 HIILRKGLIAGVKYPHLAEHISDYMARXXXXXXXXXXXXXEHKRVVAEFCGNVELCRLTE 180
           HIILRKGLI G +YPHLAEH+SDYMA+             EHKR VAEFCGNVELCRLTE
Sbjct: 121 HIILRKGLIGGHEYPHLAEHMSDYMAKTLFYTSLLYLTTTEHKRAVAEFCGNVELCRLTE 180

Query: 181 QVVFSDPYKVSEYNRWTSPYLDQDAVAVREDNILKLEIAELKSTFCEQAQALIHGDLHXX 240
           QVVFSDPYKVS+YN WTSPYLD DA AVREDNILKLEIAELKS FCE+ QALIHGDLH  
Sbjct: 181 QVVFSDPYKVSQYNHWTSPYLDHDAEAVREDNILKLEIAELKSKFCERGQALIHGDLHTG 240

Query: 241 XXXXXXXXXXXIDPEFAFYGPMGFDIGAFIGNLILAYFSQDGHASSVDDRK 291
                      IDPEF+FYGPMGFDIGAFIGNLILAYF+Q GHA S +DRK
Sbjct: 241 SVMVTPSSTQVIDPEFSFYGPMGFDIGAFIGNLILAYFAQAGHADSANDRK 291