Jatropha Genome Database

JcCB0340941.20
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0340941.20 - phase: 1 /partial
         (158 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29933.m001427 TRANSPORT INHIBITOR RESPONSE 1 protein, putative        297   1e-81
29908.m006223 TRANSPORT INHIBITOR RESPONSE 1 protein, putative        186   4e-48
30131.m006863 TRANSPORT INHIBITOR RESPONSE 1 protein, putative        176   4e-45
29647.m002022 TRANSPORT INHIBITOR RESPONSE 1 protein, putative        168   1e-42
29610.m000411 Coronatine-insensitive protein, putative                 79   1e-15

>29933.m001427 TRANSPORT INHIBITOR RESPONSE 1 protein, putative
          Length = 589

 Score =  297 bits (761), Expect = 1e-81,   Method: Compositional matrix adjust.
 Identities = 145/156 (92%), Positives = 148/156 (94%)

Query: 3   PWMRSFGAVVKTCNKLQRLSVSGLLTDLTFEYIGRYAKNLETLSVAFAGSSDWGMQCVLG 62
           P   +FGAVVKTC KLQRLSVSGLLTDLTFEYIGRYAKNLETLSVAFAGSSDWGMQCVLG
Sbjct: 434 PMDEAFGAVVKTCTKLQRLSVSGLLTDLTFEYIGRYAKNLETLSVAFAGSSDWGMQCVLG 493

Query: 63  GCPKLRKLEIRDCPFGNAALLSGLEKYESMRSLWMSSCKVTMNGCRLLAREMPRLNVEVM 122
           GCPKLRKLEIRDCPFGNAALLSGLEKYESMRSLWMSSC VTMNGCRLLAREMPRLNVEVM
Sbjct: 494 GCPKLRKLEIRDCPFGNAALLSGLEKYESMRSLWMSSCNVTMNGCRLLAREMPRLNVEVM 553

Query: 123 KEEWSDDSQADKVYVYRSVAGPRRDAPPSVLTLSGL 158
           KE+ SDDSQADKVYVYRSVAGPRRDAP +VL LSGL
Sbjct: 554 KEDGSDDSQADKVYVYRSVAGPRRDAPSTVLNLSGL 589


>29908.m006223 TRANSPORT INHIBITOR RESPONSE 1 protein, putative
          Length = 635

 Score =  186 bits (472), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 91/155 (58%), Positives = 112/155 (72%), Gaps = 2/155 (1%)

Query: 3   PWMRSFGAVVKTCNKLQRLSVSGLLTDLTFEYIGRYAKNLETLSVAFAGSSDWGMQCVLG 62
           P    FGA+V  C KL RL+VSGLLTD  F YIG Y K + TLSVAFAG SD G++ +L 
Sbjct: 481 PMDEGFGAIVMNCKKLSRLAVSGLLTDRAFSYIGEYGKTVRTLSVAFAGDSDMGLKYLLE 540

Query: 63  GCPKLRKLEIRDCPFGNAALLSGLEKYESMRSLWMSSCKVTMNGCRLLAREMPRLNVEVM 122
           GCPKL+KLEIRD PFG+ ALLSGL  Y +MR LWMS+CK+T NGC+ +ARE+P L VEV+
Sbjct: 541 GCPKLQKLEIRDSPFGDGALLSGLHHYYNMRFLWMSACKLTRNGCQQIARELPGLVVEVI 600

Query: 123 KEEWSDDSQ--ADKVYVYRSVAGPRRDAPPSVLTL 155
             E+ +D +   D +Y+YRS+ GPR DAP  V  L
Sbjct: 601 NHEYDEDMENFVDTLYMYRSLEGPRDDAPKFVSIL 635


>30131.m006863 TRANSPORT INHIBITOR RESPONSE 1 protein, putative
          Length = 571

 Score =  176 bits (447), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 99/161 (61%), Positives = 121/161 (75%), Gaps = 6/161 (3%)

Query: 1   MNPWMRSFGAVVKTCNKLQRLSVSGLLTDLTFEYIGRYAKNLETLSVAFAGSSDWGMQCV 60
           M P    FGA+V +C  L+RLS+SGLLTD  F YIG YA++LE LS+AFAG+SD GMQ V
Sbjct: 411 MQPLDEGFGAIVHSCRGLRRLSLSGLLTDQVFLYIGMYAEHLEMLSIAFAGNSDKGMQYV 470

Query: 61  LGGCPKLRKLEIRDCPFGNAALLSGLEKYESMRSLWMSSCKVTMNGCRLLAREMPRLNVE 120
           L GC KLRKLEIRD PFGNAALL  + KYE+MRSLWMSSC+VT+ GC+ LA++MP LNVE
Sbjct: 471 LNGCKKLRKLEIRDSPFGNAALLMDVGKYETMRSLWMSSCEVTLGGCKTLAKKMPWLNVE 530

Query: 121 VMKEEW-----SDDSQ-ADKVYVYRSVAGPRRDAPPSVLTL 155
           +M E       +DD+Q  DK+Y+YR++ G R DAP  V TL
Sbjct: 531 IMNENEQADFSADDTQKVDKMYLYRTLVGHRNDAPDFVWTL 571


>29647.m002022 TRANSPORT INHIBITOR RESPONSE 1 protein, putative
          Length = 585

 Score =  168 bits (425), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 93/159 (58%), Positives = 113/159 (71%), Gaps = 5/159 (3%)

Query: 2   NPWMRSFGAVVKTCNKLQRLSVSGLLTDLTFEYIGRYAKNLETLSVAFAGSSDWGMQCVL 61
            P    FGA+V+ C  L+RLS+SGLLTD  FEYIG +AK LE LSVAFAG SD G+  VL
Sbjct: 418 QPLDDGFGAIVQYCKDLRRLSLSGLLTDRVFEYIGTHAKKLEMLSVAFAGDSDLGLHHVL 477

Query: 62  GGCPKLRKLEIRDCPFGNAALLSGLEKYESMRSLWMSSCKVTMNGCRLLAREMPRLNVEV 121
            GC  LRKLEIRDCPFG+ ALL+   K E+MRSLWMSSC V+   C+LL ++MPRLNVEV
Sbjct: 478 SGCENLRKLEIRDCPFGDKALLANAAKLETMRSLWMSSCSVSYGACKLLGQKMPRLNVEV 537

Query: 122 MKEEWSDDSQ-----ADKVYVYRSVAGPRRDAPPSVLTL 155
           + E    D++      +K+Y+YRSVAGPR D P  V T+
Sbjct: 538 IDERGPPDTRPESCPVEKLYIYRSVAGPRFDMPGFVYTM 576


>29610.m000411 Coronatine-insensitive protein, putative
          Length = 602

 Score = 79.0 bits (193), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 51/161 (31%), Positives = 80/161 (49%), Gaps = 14/161 (8%)

Query: 10  AVVKTCNKLQRLSV---SGLLTDLTFEYIGRYAKNLETLSVAFAGSSDWGMQCVLGGCPK 66
           ++++ C KL+R ++    G LTD+   YIG Y+ N+  + + + G SD G+     GCP 
Sbjct: 438 SLLRQCEKLRRFALYLRPGGLTDVGLGYIGEYSPNVRWMLLGYVGESDEGLLAFSKGCPS 497

Query: 67  LRKLEIRDCPFGNAALLSGLEKYESMRSLWMSSCKV-TMNGCRLLAREMPRLNVEVMKEE 125
           L+KLE+R C F   AL   + +  S+R LW+   +  ++ G  LLA   P  N+E++   
Sbjct: 498 LQKLEMRGCCFTERALARAVMQLTSLRYLWVQGYRASSVPGRELLAMARPFWNIELIPPR 557

Query: 126 WSDD----------SQADKVYVYRSVAGPRRDAPPSVLTLS 156
                          Q   +  Y S+AG R D P SV+ L 
Sbjct: 558 RVVVVNQVNEDVLVEQPAHILAYYSLAGARTDFPDSVVPLH 598