Jatropha Genome Database

JcCB0337681.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0337681.10 + phase: 0 /partial
         (77 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29986.m001646 sucrose synthase, putative                              137   2e-33
29726.m004086 sucrose synthase, putative                               72   8e-14
29739.m003693 sucrose synthase, putative                               68   9e-13

>29986.m001646 sucrose synthase, putative
          Length = 775

 Score =  137 bits (344), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 64/77 (83%), Positives = 68/77 (88%)

Query: 1  MANPKLGRIPSMRERVEDTLSAHRNELVSLLCRYVDQGKGILQPHTLIDELDSVVGEDGT 60
          MA PK  RIPSMRERVEDTLSAHRNELVSLLCRYVDQGKGILQPHTLIDE D+VVG+  +
Sbjct: 1  MAAPKFARIPSMRERVEDTLSAHRNELVSLLCRYVDQGKGILQPHTLIDEFDNVVGDGES 60

Query: 61 RLGLRDGPFGEALKSAQ 77
          R  LR+GPFGE LKSAQ
Sbjct: 61 RQMLRNGPFGEVLKSAQ 77


>29726.m004086 sucrose synthase, putative
          Length = 773

 Score = 71.6 bits (174), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 38/69 (55%), Positives = 47/69 (68%)

Query: 9  IPSMRERVEDTLSAHRNELVSLLCRYVDQGKGILQPHTLIDELDSVVGEDGTRLGLRDGP 68
          + S R+RV D LS +R ELVSLL R+V +GKGILQ H L+ ELD+VV +D     LR  P
Sbjct: 3  LSSFRDRVHDILSVYRVELVSLLTRHVAEGKGILQTHDLLCELDNVVVDDEAMEKLRRSP 62

Query: 69 FGEALKSAQ 77
          F E L+S Q
Sbjct: 63 FVEVLQSTQ 71


>29739.m003693 sucrose synthase, putative
          Length = 773

 Score = 68.2 bits (165), Expect = 9e-13,   Method: Composition-based stats.
 Identities = 35/77 (45%), Positives = 52/77 (67%), Gaps = 2/77 (2%)

Query: 1  MANPKLGRIPSMRERVEDTLSAHRNELVSLLCRYVDQGKGILQPHTLIDELDSVVGEDGT 60
          MA   + R+ S+RER+++TL+A+RNE+V+LL R   +GKGILQ H +I E +++   +  
Sbjct: 1  MAERVITRVHSIRERLDETLAANRNEIVALLTRIEGKGKGILQHHQIIAEFEAI--PEDI 58

Query: 61 RLGLRDGPFGEALKSAQ 77
          R  L D  FGE L+S Q
Sbjct: 59 RKNLLDSVFGEVLRSTQ 75