Jatropha Genome Database

JcCB0333061.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0333061.10 - phase: 0 /pseudo/partial
         (263 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29842.m003508 phosphatidate cytidylyltransferase, putative            286   8e-78
29640.m000412 phosphatidate cytidylyltransferase, putative            269   1e-72

>29842.m003508 phosphatidate cytidylyltransferase, putative
          Length = 423

 Score =  286 bits (731), Expect = 8e-78,   Method: Compositional matrix adjust.
 Identities = 131/169 (77%), Positives = 148/169 (87%)

Query: 90  SISCNYDLSLCANILGRFQWLTCPRKDLSTGWLQCDPGPLFKPEYYSLPGWMSNWFPRKE 149
           S++      + AN++GRFQWLTCPRKDLS+GWLQCDPGPLFKPEY+ LP W+  WFP KE
Sbjct: 250 SVTTMISAFVLANMMGRFQWLTCPRKDLSSGWLQCDPGPLFKPEYFILPEWVPQWFPWKE 309

Query: 150 ISILPVQWHALCLGLFASIIAPFGGFFASGFKRAFKIKDFGDSIPGHGGFTDRMDCQMIM 209
           ISILPVQWHAL LGLFASIIAPFGGFFASGFKRAFKIKDFGDSIPGHGG TDRMDCQM+M
Sbjct: 310 ISILPVQWHALWLGLFASIIAPFGGFFASGFKRAFKIKDFGDSIPGHGGITDRMDCQMVM 369

Query: 210 AVFAYIYHQSFVIPRDYSVEMILDQIMASLTLEEQQILFRKLGQIFQER 258
           AVFAYIYHQSFV+P+  SVEMILDQI+A+LT EEQ  L+ KLG++ +ER
Sbjct: 370 AVFAYIYHQSFVVPQSISVEMILDQILANLTFEEQYALYMKLGEMVRER 418


>29640.m000412 phosphatidate cytidylyltransferase, putative
          Length = 380

 Score =  269 bits (687), Expect = 1e-72,   Method: Compositional matrix adjust.
 Identities = 130/168 (77%), Positives = 142/168 (84%), Gaps = 1/168 (0%)

Query: 77  KVISKENMGGFYW-SISCNYDLSLCANILGRFQWLTCPRKDLSTGWLQCDPGPLFKPEYY 135
           K+  K+   GF   S++      + AN+LG FQWLTCPRKDLSTGWLQCDPGPLF PE+Y
Sbjct: 147 KLSPKKTWEGFIGASVATIISAFVLANVLGCFQWLTCPRKDLSTGWLQCDPGPLFTPEHY 206

Query: 136 SLPGWMSNWFPRKEISILPVQWHALCLGLFASIIAPFGGFFASGFKRAFKIKDFGDSIPG 195
           SLP W+ +WFP KEISILPVQWHALCLGLFASIIAPFGGFFASGFKRAFKIKDFGDSIPG
Sbjct: 207 SLPRWLPDWFPWKEISILPVQWHALCLGLFASIIAPFGGFFASGFKRAFKIKDFGDSIPG 266

Query: 196 HGGFTDRMDCQMIMAVFAYIYHQSFVIPRDYSVEMILDQIMASLTLEE 243
           HGGFTDRMDCQMIMAVFAYIYHQSF++P+DYSVEMILDQ   S  L E
Sbjct: 267 HGGFTDRMDCQMIMAVFAYIYHQSFIVPQDYSVEMILDQAEHSEILIE 314