Jatropha Genome Database

JcCB0332771.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0332771.10 + phase: 0 /partial
         (204 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29970.m000988 heavy metal cation transport atpase, putative           333   4e-92
31188.m000018 heavy metal cation transport atpase, putative            70   9e-13
29581.m000258 copper-transporting atpase paa1, putative                69   1e-12
28664.m000102 heavy metal cation transport atpase, putative            63   1e-10
29739.m003625 copper-transporting atpase paa1, putative                62   1e-10
30190.m011197 copper-transporting atpase p-type, putative              51   4e-07
33627.m000014 copper-transporting atpase p-type atpase, putative       50   6e-07
30169.m006419 copper-transporting atpase p-type, putative              49   2e-06

>29970.m000988 heavy metal cation transport atpase, putative
          Length = 820

 Score =  333 bits (853), Expect = 4e-92,   Method: Compositional matrix adjust.
 Identities = 162/204 (79%), Positives = 178/204 (87%)

Query: 1   IYRALGLMVAASPCXXXXXXXXXXXXISSCARKGILLKGGQVLDALASCHTIAFDKTGTL 60
           +YRALGLMVAASPC            ISSCARKGILLKGGQVLDAL+SCHTIAFDKTGTL
Sbjct: 394 VYRALGLMVAASPCALAVAPLAYAIAISSCARKGILLKGGQVLDALSSCHTIAFDKTGTL 453

Query: 61  TTGGLMFKAIEPIYGHKVGKKHADVTSCCTPNCEKEALAVAAAMEKGTTHPIGRAVVDHS 120
           TTGGLMFKAIEP++GH++  K+ + TSCC P+CEKEALAVAAAMEKGTTHPIGRAVVDHS
Sbjct: 454 TTGGLMFKAIEPLFGHELVNKNTNFTSCCIPSCEKEALAVAAAMEKGTTHPIGRAVVDHS 513

Query: 121 IGKDLPCVSVENFEYFPGRGLTATLNNMESGAGSIKLLKASLGSVEFITSRCKSEAESRK 180
           IGKDLP VSVE+FE FPGRGLTATLNN+ES  G +KLLKASLGS+EFITS CKSE ESRK
Sbjct: 514 IGKDLPFVSVESFECFPGRGLTATLNNIESATGRVKLLKASLGSIEFITSLCKSEDESRK 573

Query: 181 IKEAVNASSYGSDLVHAALSVDEK 204
           IK+AV ASSYGSD VHAALSV++K
Sbjct: 574 IKDAVKASSYGSDFVHAALSVNDK 597


>31188.m000018 heavy metal cation transport atpase, putative
          Length = 397

 Score = 69.7 bits (169), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 49/149 (32%), Positives = 73/149 (48%), Gaps = 20/149 (13%)

Query: 2   YRALGLMVAASPCXXXXXXXXXXXX-ISSCARKGILLKGGQVLDALASCHTIAFDKTGTL 60
           YRA+ ++VAASPC             ++   R G+L+KGG  L+ L S  +IAFDKTGTL
Sbjct: 56  YRAMAVLVAASPCALAISVPSAVLSGVARAGRSGVLVKGGGPLENLGSLTSIAFDKTGTL 115

Query: 61  TTGGLMFKAIEPIYGHKVGKKHADVTSCCTPNCEKEALAVAAAMEKGTTHPIGRAVVD-- 118
           T G        P        K  DV    +   E E LAV  A+E  + HP+  A+V+  
Sbjct: 116 TEG-------RP--------KLTDVI-VASGVSESELLAVVVAVESHSDHPLASALVEGG 159

Query: 119 -HSIGKDLPCVSVENFEYFPGRGLTATLN 146
              +  ++  + V++     GRG+ A ++
Sbjct: 160 RERLPSNVDSLRVDDVRGLTGRGVQAAVD 188


>29581.m000258 copper-transporting atpase paa1, putative
          Length = 947

 Score = 69.3 bits (168), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 47/156 (30%), Positives = 76/156 (48%), Gaps = 6/156 (3%)

Query: 7   LMVAASPCXXXXXXXXXXXXISSC-ARKGILLKGGQVLDALASCHTIAFDKTGTLTTGGL 65
           ++V A PC             +S  A +G+LL+GG VL+  +   TI FDKTGTLT G  
Sbjct: 531 VLVIACPCALGLATPTAVLVGTSLGATRGLLLRGGNVLEKFSMVKTIVFDKTGTLTIGRP 590

Query: 66  MFKAIEPIYGHKVGKKHADVTSCCTPNCEKEALAVAAAMEKGTTHPIGRAVVDHSIGKDL 125
           +   +  +   K+     +     +   E E L +AAA+E  T HP+G+A+V  +     
Sbjct: 591 VVTKVVTLGDIKITDTQMNANHKWS---EVEVLRLAAAVESNTLHPVGKAIVQAAQAVTY 647

Query: 126 PCVSVEN--FEYFPGRGLTATLNNMESGAGSIKLLK 159
             + V +  F   PG G  AT++N +   G++  ++
Sbjct: 648 QNMKVTDGTFMEEPGSGAVATVDNKQVSVGTLDWVQ 683


>28664.m000102 heavy metal cation transport atpase, putative
          Length = 976

 Score = 62.8 bits (151), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 48/174 (27%), Positives = 81/174 (46%), Gaps = 19/174 (10%)

Query: 4   ALGLMVAASPCXXXXXXXXXXX-XISSCARKGILLKGGQVLDALASCHTIAFDKTGTLTT 62
           AL ++V+A PC             ++  A  G+L+KGG  L+ LA    +AFDKTGT+T 
Sbjct: 326 ALVVLVSACPCALILSTPVATFCALTKAATSGVLIKGGDSLETLAKIKVMAFDKTGTITK 385

Query: 63  GGLMFKAIEPIYGHKVGKKHADVTSCCTPNCEKEALAVAAAMEKGTTHPIGRAVVDH--S 120
           G  +                 D  S C        +   +++E  ++HP+  A+VD+  S
Sbjct: 386 GEFVV---------------VDFGSLCEDISLDTLVYWVSSIESKSSHPMAAALVDYAKS 430

Query: 121 IGKDLPCVSVENFEYFPGRGLTATLNNMESGAGSIKL-LKASLGSVEFITSRCK 173
           +  +    +V  F+ FPG G+   ++  E   G+ K+ L+A  G+V  + +  K
Sbjct: 431 LSIEPNPENVVEFQNFPGEGIHGKIDGKEIYIGNKKIGLRAGYGTVPTLETEMK 484


>29739.m003625 copper-transporting atpase paa1, putative
          Length = 880

 Score = 62.4 bits (150), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 46/167 (27%), Positives = 78/167 (46%), Gaps = 18/167 (10%)

Query: 31  ARKGILLKGGQVLDALASCHTIAFDKTGTLTTGGLMFKAIEPIYGHKVGKKHADVTSCCT 90
           A++G+L++GG VL+ LA    IA DKTGTLT G  +  A+                   T
Sbjct: 524 AKQGLLIRGGDVLERLARIDYIALDKTGTLTEGKPVVSAV-----------------AST 566

Query: 91  PNCEKEALAVAAAMEKGTTHPIGRAVVDHSIGKDLPCVSVENFEYFPGRGLTATLNNMES 150
              E E L +AAA+EK   HPI +A+V+ +   +L   +       PG G  A ++    
Sbjct: 567 SYKESEILRIAAAVEKTALHPIAKAIVNEAESLELTIPATRGQLTEPGFGTLAEVDGRLV 626

Query: 151 GAGSIKLLKASL-GSVEFITSRCKSEAESRKIKEAVNASSYGSDLVH 196
             G++  ++     + +    R    A S ++ +  ++S+Y   +V+
Sbjct: 627 AVGTLDWVQERFHRTADLSDLRNLEAAVSFQLSKGTSSSNYSKTVVY 673


>30190.m011197 copper-transporting atpase p-type, putative
          Length = 987

 Score = 50.8 bits (120), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 44/160 (27%), Positives = 70/160 (43%), Gaps = 22/160 (13%)

Query: 5   LGLMVAASPCXXXXXXXXXXXXISSC-ARKGILLKGGQVLDALASCHTIAFDKTGTLTTG 63
           + +MV A PC             +   A +G+L+KGGQ L++    + I FDKTGTLT  
Sbjct: 604 ISVMVIACPCALGLATPTAVMVGTGVGASQGVLIKGGQALESAHKVNCIVFDKTGTLT-- 661

Query: 64  GLMFKAIEPIYGHKVGKKHADVTSCCTPNCEKEALAVAAAMEKGTTHPIGRAVVDHSI-- 121
                         VGK     T        +E   +AAA E  + HP+ +A+V+++   
Sbjct: 662 --------------VGKPVVVNTKLFKNMVLREFYELAAAAEVNSEHPLAKAIVEYAKKF 707

Query: 122 --GKDLPCV-SVENFEYFPGRGLTATLNNMESGAGSIKLL 158
              ++ P     ++F    G G+ A + N E   G+  L+
Sbjct: 708 REDEENPVWPEAKDFISITGHGVKAIVRNREIIVGNRSLM 747


>33627.m000014 copper-transporting atpase p-type atpase, putative
          Length = 494

 Score = 50.4 bits (119), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 47/180 (26%), Positives = 83/180 (46%), Gaps = 25/180 (13%)

Query: 1   IYRALGLMVAASPCXXXXXX-XXXXXXISSCARKGILLKGGQVLDALASCHTIAFDKTGT 59
           I  A+ ++V   PC               + A+ G+L++  Q + A++   TI FDKTGT
Sbjct: 132 IMSAVAVLVVTCPCALSLATPAAMLASAGTFAKGGVLIRRLQAIQAISEIDTIVFDKTGT 191

Query: 60  LTTGGLMFKAIEPIYGHKVGKKHADVTSCCTPNCEKEALAVAAAMEKGTTHPIGRAVVDH 119
           LT         E +    + + HA           +  L V A+M + + HP+ +A+   
Sbjct: 192 LT---------ENLQQVALAESHAAWD-------RQWLLDVIASMSRDSLHPVAQALHGF 235

Query: 120 SIGKDLP-CVSVENFEYFPGRGLTATLNNMESGAGSIKLLKASLGSVEF--ITSRCKSEA 176
           ++  D    + V++++   G G++AT +   +GA    LL   LG+ EF  I+   +S+A
Sbjct: 236 ALQHDAQDQLVVQDWQEIVGGGMSATFSA-PNGA----LLPVKLGNAEFCGISDELESDA 290


>30169.m006419 copper-transporting atpase p-type, putative
          Length = 968

 Score = 48.9 bits (115), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 38/137 (27%), Positives = 63/137 (45%), Gaps = 23/137 (16%)

Query: 31  ARKGILLKGGQVLDALASCHTIAFDKTGTLTTGGLMFKAIEPIYGHKVGKKHADVTSCCT 90
           A +G+L+KGG  L+      T+ FDKTGTLT G       +P+    V      +   C 
Sbjct: 618 ASQGVLIKGGNALEKAHKVKTVVFDKTGTLTIG-------KPVVVSAVLFSSFSMEEFCD 670

Query: 91  PNCEKEALAVAAAMEKGTTHPIGRAVVDH------SIGKDLPCVS-VENFEYFPGRGLTA 143
                    +  A E  + HPI +AVV+H       IG +   ++  ++FE   G G++ 
Sbjct: 671 ---------MVTAAEANSEHPIAKAVVEHVKRLRQKIGFNTEHIAEAKDFEVHTGTGVSG 721

Query: 144 TLNNMESGAGSIKLLKA 160
            + +     G+ +L++A
Sbjct: 722 KVGDRTVLVGNKRLMQA 738