Jatropha Genome Database

JcCB0320341.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0320341.10 + phase: 0 
         (77 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29830.m001444 transcription factor, putative                          119   2e-28

>29830.m001444 transcription factor, putative
          Length = 223

 Score =  119 bits (299), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 59/64 (92%), Positives = 64/64 (100%)

Query: 12  EEAERQKQENENAAMAVAKRQKMLEKEKETIERKPFIEIQSETKRFRQDVFKRRHRARAL 71
           EEAERQKQENE+AAMAVAKRQ+MLE+EKETIERKPF+EIQSETKRFRQDVFKRRHRARAL
Sbjct: 159 EEAERQKQENEDAAMAVAKRQRMLEREKETIERKPFMEIQSETKRFRQDVFKRRHRARAL 218

Query: 72  RNQG 75
           +NQG
Sbjct: 219 KNQG 222