Jatropha Genome Database

JcCB0319311.20
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0319311.20 + phase: 0 
         (60 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29830.m001422 DNA-damage-inducible protein f, putative                100   2e-22
29820.m001007 DNA-damage-inducible protein f, putative                 67   1e-12
30122.m000355 DNA-damage-inducible protein f, putative                 65   5e-12
30169.m006452 DNA-damage-inducible protein f, putative                 62   4e-11
27810.m000635 DNA-damage-inducible protein f, putative                 59   7e-10
29606.m000098 DNA-damage-inducible protein f, putative                 59   7e-10
29606.m000099 DNA-damage-inducible protein f, putative                 58   8e-10

>29830.m001422 DNA-damage-inducible protein f, putative
          Length = 447

 Score =  100 bits (248), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 46/52 (88%), Positives = 51/52 (98%)

Query: 1   MYLGSGIFLNMMGISSASPMRIPAERFLKLRAIGAPAVVLYLAIQGIFRGLR 52
           MYLGSG+FLNMMGISSASPMR+PAE+FLK+RAIGAPAVVLYLAIQGIFRG +
Sbjct: 114 MYLGSGVFLNMMGISSASPMRVPAEKFLKIRAIGAPAVVLYLAIQGIFRGFK 165


>29820.m001007 DNA-damage-inducible protein f, putative
          Length = 560

 Score = 67.4 bits (163), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 30/52 (57%), Positives = 37/52 (71%)

Query: 1   MYLGSGIFLNMMGISSASPMRIPAERFLKLRAIGAPAVVLYLAIQGIFRGLR 52
           ++ GSG  +N+MGI   SPMRIPAE FL  RA GAP +V+ LA QG FRG +
Sbjct: 219 LFFGSGFLMNIMGIPVDSPMRIPAENFLTWRAFGAPPIVIALAAQGTFRGFK 270


>30122.m000355 DNA-damage-inducible protein f, putative
          Length = 605

 Score = 65.5 bits (158), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 32/52 (61%), Positives = 40/52 (76%)

Query: 1   MYLGSGIFLNMMGISSASPMRIPAERFLKLRAIGAPAVVLYLAIQGIFRGLR 52
           + LG G FL +MGI+  SPM IPAERFL LRA+GAPA V+ LA+QG+ RG +
Sbjct: 252 LSLGRGPFLKLMGITLDSPMCIPAERFLFLRALGAPAFVVSLALQGVLRGFK 303


>30169.m006452 DNA-damage-inducible protein f, putative
          Length = 522

 Score = 62.4 bits (150), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 27/49 (55%), Positives = 39/49 (79%)

Query: 4   GSGIFLNMMGISSASPMRIPAERFLKLRAIGAPAVVLYLAIQGIFRGLR 52
           G+   LN MG+SS SPM  PA+++L LR++GAPA++L LA+QG+FRG +
Sbjct: 188 GAKPLLNFMGVSSDSPMLTPAQQYLTLRSLGAPAILLSLAMQGVFRGFK 236


>27810.m000635 DNA-damage-inducible protein f, putative
          Length = 906

 Score = 58.5 bits (140), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 26/44 (59%), Positives = 38/44 (86%)

Query: 9   LNMMGISSASPMRIPAERFLKLRAIGAPAVVLYLAIQGIFRGLR 52
           L+ MG+ S SPM IPA+++L LR++GAPAV+L LA+QG+FRG++
Sbjct: 588 LSYMGVYSDSPMLIPAQQYLVLRSLGAPAVLLSLAMQGVFRGIK 631


>29606.m000098 DNA-damage-inducible protein f, putative
          Length = 546

 Score = 58.5 bits (140), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 25/44 (56%), Positives = 36/44 (81%)

Query: 9   LNMMGISSASPMRIPAERFLKLRAIGAPAVVLYLAIQGIFRGLR 52
           L++MG+ S SPM  PA ++L LRA+G+PAV+L LA+QG+FRG +
Sbjct: 220 LSIMGVKSGSPMLTPARKYLTLRALGSPAVLLSLAMQGVFRGFK 263


>29606.m000099 DNA-damage-inducible protein f, putative
          Length = 518

 Score = 58.2 bits (139), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 25/44 (56%), Positives = 36/44 (81%)

Query: 9   LNMMGISSASPMRIPAERFLKLRAIGAPAVVLYLAIQGIFRGLR 52
           L++MG+ S SPM  PA ++L LRA+G+PAV+L LA+QG+FRG +
Sbjct: 192 LSIMGVKSGSPMLTPARKYLTLRALGSPAVLLSLAMQGVFRGFK 235