Jatropha Genome Database

JcCB0318551.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0318551.10 - phase: 0 /partial
         (233 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

30008.m000797 3-isopropylmalate dehydratase, putative                 402   e-113
30008.m000798 3-isopropylmalate dehydratase, putative                 371   e-103

>30008.m000797 3-isopropylmalate dehydratase, putative
          Length = 510

 Score =  402 bits (1032), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 192/219 (87%), Positives = 198/219 (90%), Gaps = 1/219 (0%)

Query: 16  NQKDLG-RXXXXXXXXXXXIPKCRKSISKKIVSVMAPQQSERRPATTGSVKTAMTMTEKI 74
            +KDLG             IPKC+KSISKK+VSVMAPQQSER PATTGSVKTAMTMTEKI
Sbjct: 15  TKKDLGLSAFSSQSSPFYSIPKCKKSISKKVVSVMAPQQSERTPATTGSVKTAMTMTEKI 74

Query: 75  LAKASEKPQLSPGENVWVNVDVLMTHDVCGPGSIGIFKKEFGANAKVWDREKIVIIPDHY 134
           LA+ASEK QLSPGENVWVNVDVLMTHDVCGPGSIGIFK+EFG NA VWDREKIVIIPDHY
Sbjct: 75  LARASEKSQLSPGENVWVNVDVLMTHDVCGPGSIGIFKREFGQNATVWDREKIVIIPDHY 134

Query: 135 IFTADERANRNVDILRDFCYEQNIKYFYDIKDLSNFKANPDYKGVCHVALAQEGHCRPGE 194
           IFT DERANRNVDILRDFC EQN+KYFYDIKDLSNFK NPDYKGVCHVALAQEGHCRPGE
Sbjct: 135 IFTTDERANRNVDILRDFCQEQNVKYFYDIKDLSNFKVNPDYKGVCHVALAQEGHCRPGE 194

Query: 195 VLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKLLLK 233
           VLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKLLLK
Sbjct: 195 VLLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKLLLK 233


>30008.m000798 3-isopropylmalate dehydratase, putative
          Length = 621

 Score =  371 bits (952), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 175/218 (80%), Positives = 192/218 (88%), Gaps = 1/218 (0%)

Query: 17  QKDLGRXXXXXXXXXXXIPKCRKSISKKIVSVMAPQQSERRPATTGSV-KTAMTMTEKIL 75
           QKDLG            + KC+KSI K+IV+V++PQQSER+PATTGSV K AMT TEKIL
Sbjct: 153 QKDLGLSRLSSPSPSVYVLKCKKSIFKRIVAVVSPQQSERKPATTGSVVKNAMTTTEKIL 212

Query: 76  AKASEKPQLSPGENVWVNVDVLMTHDVCGPGSIGIFKKEFGANAKVWDREKIVIIPDHYI 135
           A+ASEKPQL PGENVWVNVD+LMTHDVCGPGS  IFK+EFG NAKVWD EK+V+IPDHYI
Sbjct: 213 ARASEKPQLGPGENVWVNVDILMTHDVCGPGSFAIFKREFGENAKVWDHEKVVVIPDHYI 272

Query: 136 FTADERANRNVDILRDFCYEQNIKYFYDIKDLSNFKANPDYKGVCHVALAQEGHCRPGEV 195
           FTAD+ ANRNVDILR+FC EQNIK+FYDIKD+SNFKAN DYKGVCH+ALAQEGHCRPGEV
Sbjct: 273 FTADKLANRNVDILREFCLEQNIKHFYDIKDISNFKANSDYKGVCHIALAQEGHCRPGEV 332

Query: 196 LLGTDSHTCTAGAFGQFATGIGNTDAGFVLGTGKLLLK 233
           LLGTDSHTCTAGAFGQFATGIG TDAGFVLGTGKLLLK
Sbjct: 333 LLGTDSHTCTAGAFGQFATGIGITDAGFVLGTGKLLLK 370