Jatropha Genome Database

JcCB0317451.20
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0317451.20 - phase: 0 /partial
         (73 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

30068.m002532 glutamine-dependent NAD(+) synthetase, putative          87   1e-18
30068.m002535 glutamine-dependent NAD(+) synthetase, putative          81   9e-17

>30068.m002532 glutamine-dependent NAD(+) synthetase, putative
          Length = 665

 Score = 87.4 bits (215), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 39/50 (78%), Positives = 42/50 (84%)

Query: 1   RHKMTVLTPSYQAESYAPDDNRSDLRQFLYNTRWFRQFQKIDELASELDS 50
           RHKMTVLTPSY AESY+P+DNR DLRQFLYN RW  QFQKIDE+  ELD 
Sbjct: 584 RHKMTVLTPSYHAESYSPEDNRFDLRQFLYNVRWPYQFQKIDEIVEELDG 633


>30068.m002535 glutamine-dependent NAD(+) synthetase, putative
          Length = 716

 Score = 81.3 bits (199), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 35/50 (70%), Positives = 39/50 (78%)

Query: 1   RHKMTVLTPSYQAESYAPDDNRSDLRQFLYNTRWFRQFQKIDELASELDS 50
           RHKM VLTP Y  E Y+PDDNR DLRQ LYNTRW  QF+KIDE+  E+DS
Sbjct: 646 RHKMAVLTPFYHVEGYSPDDNRCDLRQLLYNTRWPYQFRKIDEIVREIDS 695