Jatropha Genome Database

JcCB0317061.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0317061.10 - phase: 0 /partial
         (192 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29648.m001969 UDP-n-acteylglucosamine pyrophosphorylase, putative     351   1e-97

>29648.m001969 UDP-n-acteylglucosamine pyrophosphorylase, putative
          Length = 622

 Score =  351 bits (900), Expect = 1e-97,   Method: Compositional matrix adjust.
 Identities = 170/191 (89%), Positives = 175/191 (91%)

Query: 1   LILELGPYIEELKKTGGAIKEFVNPKYKDASKTSFKSSTRLECMMQDYPKTLPPSARVGF 60
           LILELGPYIEELKKTGGAIKEFVNPKYKDA+KTSFKSSTRLECMMQDYPKTLPP+ARVGF
Sbjct: 380 LILELGPYIEELKKTGGAIKEFVNPKYKDATKTSFKSSTRLECMMQDYPKTLPPTARVGF 439

Query: 61  TVMDTWLAYAPVKNNPEDAAKVPKGNPYHSATSGEMAIYRANSLILRKXXXXXXXXXXXX 120
           TVMDTWLAYAPVKNNPEDAAKVPKGNPYHSATSGEMAIY ANSLILRK            
Sbjct: 440 TVMDTWLAYAPVKNNPEDAAKVPKGNPYHSATSGEMAIYCANSLILRKVGVQVDEPVQQV 499

Query: 121 FNGQEVEVWPRITWKPKWGLTFSDVKRKVSGSCSISQRSTMAIKGRNIFVEDLSLDGALV 180
           FNGQEVEVWPRITWKPKWGLTFSDVK KVSGSCS+SQRSTMAIKGRNIFVEDLSLDGA+V
Sbjct: 500 FNGQEVEVWPRITWKPKWGLTFSDVKSKVSGSCSVSQRSTMAIKGRNIFVEDLSLDGAVV 559

Query: 181 IESVDGAEVCI 191
           IESVD AEV +
Sbjct: 560 IESVDEAEVKV 570