Jatropha Genome Database

JcCB0309941.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0309941.10 + phase: 0 
         (151 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

30169.m006297 phosphoglycerate kinase, putative                       188   7e-49
30169.m006296 phosphoglycerate kinase, putative                       101   1e-22

>30169.m006297 phosphoglycerate kinase, putative
          Length = 479

 Score =  188 bits (478), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 95/110 (86%), Positives = 100/110 (90%), Gaps = 2/110 (1%)

Query: 37  PVSSAGLRAASIGRLGFAPADPLFSHHVASKIRSFGFGKASRAVVSMAKKSVGDLTGADL 96
           PVS  GLR  ++ RLGFA ADP FSHHVASKIRSFG GKASRAVVSMAKKSVGDLT ADL
Sbjct: 31  PVS--GLRPTTLRRLGFAAADPAFSHHVASKIRSFGSGKASRAVVSMAKKSVGDLTAADL 88

Query: 97  KGKRVFVRADLNVPLDDNQNITDDTRIRAAIPTIKHLIQNGAKVILSTHL 146
           KGK+VFVRADLNVPLDDNQ ITDDTRIRAAIPT+KHLIQNGAKVILS+HL
Sbjct: 89  KGKKVFVRADLNVPLDDNQKITDDTRIRAAIPTVKHLIQNGAKVILSSHL 138


>30169.m006296 phosphoglycerate kinase, putative
          Length = 401

 Score =  101 bits (252), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 49/62 (79%), Positives = 54/62 (87%)

Query: 85  KKSVGDLTGADLKGKRVFVRADLNVPLDDNQNITDDTRIRAAIPTIKHLIQNGAKVILST 144
           KKSV  L  ADLKGKRVFVR DLNVPLDDN NITDDTRIRAA+PTIK+L+ +GA+VIL T
Sbjct: 4   KKSVSSLKEADLKGKRVFVRVDLNVPLDDNLNITDDTRIRAAVPTIKYLMDHGARVILCT 63

Query: 145 HL 146
           HL
Sbjct: 64  HL 65