Jatropha Genome Database

JcCB0309911.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0309911.10 + phase: 1 /partial
         (248 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29660.m000781 phosphatidylserine synthase, putative                   425   e-119

>29660.m000781 phosphatidylserine synthase, putative
          Length = 423

 Score =  425 bits (1092), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 204/217 (94%), Positives = 210/217 (96%)

Query: 22  IWASGVLNPESSASGDMETSVKRGVWAMIAVFLAYCLLQAPSTVLIRPHPAIWRLVHGMA 81
           IWASG L+PES ASGDM TSVKRGVWAMIAVFLAYC LQAPSTVLIRPHPAIWRLVHG+A
Sbjct: 52  IWASGALDPESCASGDMVTSVKRGVWAMIAVFLAYCSLQAPSTVLIRPHPAIWRLVHGLA 111

Query: 82  VVYLVALTFLLFQKRDDARQFMKFLHPDLGVELPERSYGADCRIYMPENPTSRFKNVYDT 141
           VVYLV+LTFLLFQKRDDARQFMKFLHPDLGVELPERSYGADCRIYMPE+P+SRFKNVYDT
Sbjct: 112 VVYLVSLTFLLFQKRDDARQFMKFLHPDLGVELPERSYGADCRIYMPEHPSSRFKNVYDT 171

Query: 142 LFDEFVLAHIFGWWGKAILLRNQPLLWVLSIGFEFLEFTFRHMLPNFNECWWDSIILDIL 201
           LFDEFVLAHIFGWWGKAIL+RNQPLLWVLSIGFEFLEFTFRHMLPNFNECWWDSIILDIL
Sbjct: 172 LFDEFVLAHIFGWWGKAILIRNQPLLWVLSIGFEFLEFTFRHMLPNFNECWWDSIILDIL 231

Query: 202 ICNWFGIWAGMHTVRYFDGKTYEWVGISRQPNIIGKA 238
           ICNWFGIWAGMHTVRYFDGKTYEWVGISRQPNI  K 
Sbjct: 232 ICNWFGIWAGMHTVRYFDGKTYEWVGISRQPNIFSKV 268