Jatropha Genome Database

JcCB0309871.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0309871.10 + phase: 0 /pseudo
         (449 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29791.m000527 Male sterility protein, putative                        317   8e-87
30055.m001531 Male sterility protein, putative                        315   3e-86
29791.m000526 oxidoreductase, acting on the CH-CH group of donor...   263   1e-70
30055.m001532 oxidoreductase, acting on the CH-CH group of donor...   169   2e-42
28516.m000032 Male sterility protein, putative                        149   2e-36
28902.m000037 Male sterility protein, putative                        115   4e-26
41482.m000013 conserved hypothetical protein                           92   4e-19
33081.m000012 conserved hypothetical protein                           86   5e-17
30029.m000017 conserved hypothetical protein                           79   4e-15

>29791.m000527 Male sterility protein, putative
          Length = 493

 Score =  317 bits (812), Expect = 8e-87,   Method: Compositional matrix adjust.
 Identities = 148/238 (62%), Positives = 193/238 (81%)

Query: 1   MELEKITQFLERKTVLVTGATGFLAKVFLEKLLRVQPNVKKLYLLLRAADTSSVNQRFYN 60
           M+L  + +FL+ KT+LVTGATG+LAKVF+EK+LRVQPNVKKLYLLLRAAD +S  +R   
Sbjct: 1   MDLGSVIEFLDNKTILVTGATGYLAKVFVEKVLRVQPNVKKLYLLLRAADANSAMERLNK 60

Query: 61  EVMGKDLFRVVKEKLGANLNSFIAKKIAIVAGDVSYEDLGVKDSSLREEMINDLDFILNF 120
           EV+GKDLF+V++E+ GA+LNSF+++K+  + GD+S EDLG+KDS+LR EM+ D+D ++NF
Sbjct: 61  EVIGKDLFKVLRERYGASLNSFVSEKMTPIPGDISREDLGIKDSNLRNEMLKDIDVVINF 120

Query: 121 AATTRFDERYDVALGTNTLGAKNVLCFAKNCLKLKLLIHVSTAYVCGESSGLIMEKPYQL 180
           AATT FDERYDVALG NTLGA +VL FAK CLK+++L+HVSTAYVCGE +GLI+EKP+ +
Sbjct: 121 AATTNFDERYDVALGINTLGALHVLNFAKKCLKIRMLVHVSTAYVCGEDTGLILEKPFPM 180

Query: 181 GEALNGVLGLNIVEEKKLIDRKLNQLQREGATEANIKKAMIDMGIERAKTYGWPNTYI 238
           GE   G   ++I EEKKL+  KLN+L+ E A+E  I   M D GIERA+  GWPNTY+
Sbjct: 181 GEGKKGNSKIDIEEEKKLVQEKLNELESENASEKEITAIMKDFGIERARALGWPNTYV 238



 Score =  127 bits (319), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 60/137 (43%), Positives = 87/137 (63%), Gaps = 3/137 (2%)

Query: 315 YFTSKPWILQNGKPVKVAKPTILTTMANFDRYIAIRYLPWLKVLKLANKISCDYFQGTYN 374
           YF++ PWI + G PVK+ K  +L++M +F  Y+A+ +   LK  +LA  +    +Q  Y 
Sbjct: 357 YFSANPWIDKEGSPVKIGKGIVLSSMTSFHMYMAVCFQLPLKAFELATTLVLKEYQDKYR 416

Query: 375 NLNRKIKRVMRLVELYQPYLFFHGIFDDSNTNKLLRTAKDNGMET---NNFFFDVKSIDW 431
            L+RK+K V RLV+LY+ YLFF GIFDD+N  KL   A+   +E    + F FD  +IDW
Sbjct: 417 LLDRKVKLVQRLVDLYKSYLFFEGIFDDTNLEKLRTEARLRSLEVEEMDEFNFDPTNIDW 476

Query: 432 DDYFINTHIPGIVKYVL 448
           +DY +  HIPG+VKY +
Sbjct: 477 EDYMMGVHIPGLVKYTM 493


>30055.m001531 Male sterility protein, putative
          Length = 493

 Score =  315 bits (807), Expect = 3e-86,   Method: Compositional matrix adjust.
 Identities = 147/238 (61%), Positives = 192/238 (80%)

Query: 1   MELEKITQFLERKTVLVTGATGFLAKVFLEKLLRVQPNVKKLYLLLRAADTSSVNQRFYN 60
           ME+  I +FLE KT+L TGATG+LAK+F+EK+LRVQPNVKKLYLLLRAAD  S  +R   
Sbjct: 1   MEVGSILEFLENKTILATGATGYLAKIFVEKVLRVQPNVKKLYLLLRAADADSAMERLNR 60

Query: 61  EVMGKDLFRVVKEKLGANLNSFIAKKIAIVAGDVSYEDLGVKDSSLREEMINDLDFILNF 120
           EV+GKDLF+ V+EK G++LNSF+++K+  + GD+S EDLG++D +LR+E++ D+D ++NF
Sbjct: 61  EVIGKDLFKGVREKYGSSLNSFVSEKMTPIPGDISREDLGIEDFNLRDEILKDIDVVINF 120

Query: 121 AATTRFDERYDVALGTNTLGAKNVLCFAKNCLKLKLLIHVSTAYVCGESSGLIMEKPYQL 180
           AATT FDERYDVALG NTLGA NVL FAK CLK+++L+HVSTAYVCGE +GLI+EKP+ +
Sbjct: 121 AATTNFDERYDVALGVNTLGALNVLNFAKKCLKIRMLVHVSTAYVCGEDTGLILEKPFPM 180

Query: 181 GEALNGVLGLNIVEEKKLIDRKLNQLQREGATEANIKKAMIDMGIERAKTYGWPNTYI 238
           GEA  G   ++I EEKKL+  KLN+L+ E A+E  I   M D GIERA+ +GWPNTY+
Sbjct: 181 GEAKKGNRKIDIEEEKKLVQEKLNELESENASEKEITAIMKDFGIERARMFGWPNTYV 238



 Score =  129 bits (325), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 62/137 (45%), Positives = 90/137 (65%), Gaps = 3/137 (2%)

Query: 315 YFTSKPWILQNGKPVKVAKPTILTTMANFDRYIAIRYLPWLKVLKLANKISCDYFQGTYN 374
           YF++ PWI + G PVK +K  IL++M  F  Y+A R+   LK L++A  +    +Q    
Sbjct: 357 YFSANPWINKEGVPVKTSKAIILSSMTKFYIYMAFRFQLPLKALQVATILVLKNYQDMCT 416

Query: 375 NLNRKIKRVMRLVELYQPYLFFHGIFDDSNTNKLLRTAKDNGM---ETNNFFFDVKSIDW 431
            L+RK+K VMRLV+LY+PY+FF G FDDSN+ KL   A++  +   E + F FD   IDW
Sbjct: 417 VLDRKVKLVMRLVQLYKPYVFFEGSFDDSNSEKLRIEARERSLELKEMDEFNFDPTEIDW 476

Query: 432 DDYFINTHIPGIVKYVL 448
           ++Y ++ HIPG+VKYV+
Sbjct: 477 ENYMMSVHIPGLVKYVM 493


>29791.m000526 oxidoreductase, acting on the CH-CH group of donors,
           putative
          Length = 186

 Score =  263 bits (673), Expect = 1e-70,   Method: Compositional matrix adjust.
 Identities = 122/186 (65%), Positives = 158/186 (84%)

Query: 1   MELEKITQFLERKTVLVTGATGFLAKVFLEKLLRVQPNVKKLYLLLRAADTSSVNQRFYN 60
           MEL  I +FLE+KT+LVTGATG+LAK+F+EK+LRVQPNVKKLYLLLRAAD  S  +R   
Sbjct: 1   MELGSILEFLEKKTILVTGATGYLAKIFVEKVLRVQPNVKKLYLLLRAADADSAMERLKQ 60

Query: 61  EVMGKDLFRVVKEKLGANLNSFIAKKIAIVAGDVSYEDLGVKDSSLREEMINDLDFILNF 120
           EV+GKDLF+ V+EK G++LNSF+++K+  + GD+S EDLG++D +LR+E++ D+D ++NF
Sbjct: 61  EVIGKDLFKGVREKYGSSLNSFVSEKMTPIPGDISREDLGIEDFNLRDEILKDIDVVINF 120

Query: 121 AATTRFDERYDVALGTNTLGAKNVLCFAKNCLKLKLLIHVSTAYVCGESSGLIMEKPYQL 180
           AATT FDERYDVALG NTLGA NVL FAK CLK+++L+HVSTAYVCGE +GLI+EKP+ +
Sbjct: 121 AATTNFDERYDVALGVNTLGALNVLNFAKKCLKIRMLVHVSTAYVCGEDTGLILEKPFPM 180

Query: 181 GEALNG 186
           GEA  G
Sbjct: 181 GEAKKG 186


>30055.m001532 oxidoreductase, acting on the CH-CH group of donors,
           putative
          Length = 414

 Score =  169 bits (429), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 77/112 (68%), Positives = 94/112 (83%)

Query: 127 DERYDVALGTNTLGAKNVLCFAKNCLKLKLLIHVSTAYVCGESSGLIMEKPYQLGEALNG 186
           D +YDVAL  NT+GAK+VLCFAK C++LK+L+HVSTAYV GE  GL+ E PYQ+GE +NG
Sbjct: 50  DAKYDVALDLNTMGAKHVLCFAKKCVRLKVLVHVSTAYVAGEKGGLLQETPYQIGETING 109

Query: 187 VLGLNIVEEKKLIDRKLNQLQREGATEANIKKAMIDMGIERAKTYGWPNTYI 238
           V GL+I EEK+L+D KLNQLQ EGAT+  IK+AM DMGI+RAK YGWPNTY+
Sbjct: 110 VSGLDIDEEKRLVDEKLNQLQAEGATDDAIKEAMKDMGIQRAKLYGWPNTYV 161



 Score =  161 bits (407), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 86/135 (63%), Positives = 106/135 (78%)

Query: 315 YFTSKPWILQNGKPVKVAKPTILTTMANFDRYIAIRYLPWLKVLKLANKISCDYFQGTYN 374
           YFT KPWI ++GKPVKV K  +L +MA+F RY+A+RYL  LK L+LAN   C YFQG Y+
Sbjct: 280 YFTKKPWIGKDGKPVKVGKVKVLDSMASFRRYMAVRYLLLLKGLELANTAFCHYFQGIYS 339

Query: 375 NLNRKIKRVMRLVELYQPYLFFHGIFDDSNTNKLLRTAKDNGMETNNFFFDVKSIDWDDY 434
           +LNRKI  VM+LVELY+PYLFF G+FDD NT KL   A++NG E + F+FD KSIDW+DY
Sbjct: 340 DLNRKINFVMKLVELYRPYLFFQGVFDDINTEKLRMAARENGTEIDMFYFDPKSIDWEDY 399

Query: 435 FINTHIPGIVKYVLK 449
           F+N HIPG+VKYV K
Sbjct: 400 FVNVHIPGVVKYVFK 414



 Score = 82.4 bits (202), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 38/51 (74%), Positives = 44/51 (86%)

Query: 1  MELEKITQFLERKTVLVTGATGFLAKVFLEKLLRVQPNVKKLYLLLRAADT 51
          ME   I QFLE+K +L+TGATGFLAK+F+EK+LRVQPNVKKLYLLLRA D 
Sbjct: 1  MEFGSILQFLEKKNILITGATGFLAKIFIEKILRVQPNVKKLYLLLRAPDA 51


>28516.m000032 Male sterility protein, putative
          Length = 387

 Score =  149 bits (377), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 88/243 (36%), Positives = 144/243 (59%), Gaps = 19/243 (7%)

Query: 6   ITQFLERKTVLVTGATGFLAKVFLEKLLRVQPNVKKLYLLLRAADTSSVNQRFYNEVMGK 65
           I +FL  +   +TGATGFLAK   ++      +V K+Y+L++A    +   R  +E++  
Sbjct: 112 IVKFLRGRGFFITGATGFLAKDSTDR-----TDVGKIYVLIKAKSKEAAMARLKSEIINA 166

Query: 66  DLFRVVKEKLGANLNSFIAKKIAIVAGDVSYEDLGVKDSSLREEMINDLDFILNFAATTR 125
           +LF+ +++  G +  +F+  K+  V G++   +LG+++  L   + ND+D I+N AA T 
Sbjct: 167 ELFKSLQQTYGKSYQAFMLSKLVPVVGNICESNLGLEED-LTNLIANDVDVIVNSAANTT 225

Query: 126 FDERYDVALGTNTLGAKNVLCFAKNCLKLKLLIHVSTAYVCGESSGLIMEKPYQLG---- 181
           FDERYDVA+  NT GA +++ FAK C  LKL + VSTAYV G+  G IMEK + +G    
Sbjct: 226 FDERYDVAVDINTRGACHLMNFAKKCQNLKLFLQVSTAYVNGQRQGRIMEKTFCIGDCIA 285

Query: 182 ------EALNGVLGLNIVEEKKLIDRKLNQLQREGATEANIKKAMIDMGIERAKTYGWPN 235
                 E+ +G L L I++ +  +   LN   ++G  E+ + + M  +G+ERA+ YGW +
Sbjct: 286 KENFISESTSGSL-LPILDVEYEMKLALN--SKDGLQESEVAQEMKRLGLERARRYGWQD 342

Query: 236 TYI 238
           TY+
Sbjct: 343 TYV 345


>28902.m000037 Male sterility protein, putative
          Length = 442

 Score =  115 bits (289), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 64/188 (34%), Positives = 111/188 (59%), Gaps = 17/188 (9%)

Query: 61  EVMGKDLFRVVKEKLGANLNSFIAKKIAIVAGDVSYEDLGVKDSSLREEMINDLDFILNF 120
           E++  D+F+ +K+K G +  +F+  K+  V G++   DLG+ ++++   +  ++  I+N 
Sbjct: 7   EIINADVFKCLKQKYGQSYQNFMLSKLVPVVGNICESDLGL-EATMANVISREVHVIINS 65

Query: 121 AATTRFDERYDVALGTNTLGAKNVLCFAKNCLKLKLLIHVSTAYVCGESSGLIMEKPYQL 180
           AA TRF+ERYDV++ TNT G  +++ FAK C  L L + +S+AY  G   G+IMEK + +
Sbjct: 66  AANTRFNERYDVSIDTNTRGTYHLMNFAKYCKNLSLFLQISSAYANGPRKGIIMEKKFSM 125

Query: 181 GEALNG-----------VLGLNIVEEKKLIDRKLNQLQREGATEANIKKAMIDMGIERAK 229
           G+ + G           +  LN+ +E +L    ++  Q    T+ N+KK    +G+ERA+
Sbjct: 126 GDTITGEKSNSENRSTSLPILNVEKEIQLAFDAIDTFQDNSLTQ-NLKK----LGLERAE 180

Query: 230 TYGWPNTY 237
            YGW +TY
Sbjct: 181 RYGWHDTY 188



 Score = 61.6 bits (148), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 39/136 (28%), Positives = 65/136 (47%), Gaps = 7/136 (5%)

Query: 315 YFTSKPWILQNGKPVKVAKPTIL-TTMANFDRYIAIRYLPWLKVLKLANKISCDYFQGTY 373
           +F   P++   G P+ V  P  L T++  F  ++        + + +  K S    +   
Sbjct: 309 HFKCNPFLDSKGNPINVTAPMKLCTSVEEFSTHLKTDVAKQREFMAMEFKNS----KRPE 364

Query: 374 NNLNRKIKRVMRLVELYQPYLFFHGIFDDSNTNKLLRTAKDNGMETNNFFFDVKSIDWDD 433
               + ++ V +L  +Y+PY F+ G FD SN   L+    +   E   F FDVKSIDW  
Sbjct: 365 IYAQKLMELVRQLATIYKPYGFYKGRFDCSNLQGLMENMSEE--EKIEFGFDVKSIDWGH 422

Query: 434 YFINTHIPGIVKYVLK 449
           Y  N H+PG+  +V++
Sbjct: 423 YIKNVHVPGLRMHVMQ 438


>41482.m000013 conserved hypothetical protein
          Length = 152

 Score = 92.4 bits (228), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 46/124 (37%), Positives = 79/124 (63%), Gaps = 1/124 (0%)

Query: 6   ITQFLERKTVLVTGATGFLAKVFLEKLLRVQPNVKKLYLLLRAADTSSVNQRFYNEVMGK 65
           I  FL+ KT+L+TGATGFL  V +EK+LR   ++ KLYLL++A +  +  +R  +E++  
Sbjct: 30  IVSFLQGKTLLITGATGFLGMVLVEKILRSVADIDKLYLLIKARNKEAAMERLNSEIIDA 89

Query: 66  DLFRVVKEKLGANLNSFIAKKIAIVAGDVSYEDLGVKDSSLREEMINDLDFILNFAATTR 125
           D+F+ +K+K G +   F+  K+  V G+    DLG+ ++++ + +   +  I+N AA T 
Sbjct: 90  DVFKCLKQKYGQSYQQFMLSKLVPVVGNTCESDLGL-ETTMADVISRQVHVIINSAANTT 148

Query: 126 FDER 129
           F+ER
Sbjct: 149 FNER 152


>33081.m000012 conserved hypothetical protein
          Length = 177

 Score = 85.5 bits (210), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 47/140 (33%), Positives = 77/140 (55%), Gaps = 13/140 (9%)

Query: 315 YFTSKPWILQNGKPVKVAKPTILTTMANFDRYIAIRYLPWLKVLK---LANKISCD-YFQ 370
           ++ S P++   GKP+ V    +  +M +F  ++      W  V++   L    S D    
Sbjct: 40  HYNSTPYMDSKGKPIHVPSMKLFNSMEDFSEHL------WRDVIQRNGLTAMASSDGKLS 93

Query: 371 GTYNNLNRK-IKRVMRLVELYQPYLFFHGIFDDSNTNKLLRTAKDNGMETNNFFFDVKSI 429
             Y  + RK +++   L  +Y+PY F+ G FD+SNT +L+ +  +   E  NF FDV++I
Sbjct: 94  KKYELICRKSVEQAKYLANIYEPYTFYGGRFDNSNTQRLMESMSET--EKKNFGFDVENI 151

Query: 430 DWDDYFINTHIPGIVKYVLK 449
           DW +Y IN HIPG+ K+V+K
Sbjct: 152 DWREYIINVHIPGLRKHVMK 171


>30029.m000017 conserved hypothetical protein
          Length = 285

 Score = 79.0 bits (193), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 49/140 (35%), Positives = 77/140 (55%), Gaps = 18/140 (12%)

Query: 109 EMINDLDFILNFAATTRFDERYDVALGTNTLGAKNVLCFAKNCLKLKLLIHVSTAYVCGE 168
           E+I  L  I  +   + +  RYDV++ TNT G  +++ FAK C  L L + +STAYV G 
Sbjct: 109 ELIRQLATI--YKPYSFYKGRYDVSIDTNTRGTSHLMNFAKYCKNLSLFLQISTAYVNGP 166

Query: 169 SSGLIMEKPYQLGEALNG-----------VLGLNIVEEKKLIDRKLNQLQREGATEANIK 217
             G+IMEK + +G+ + G           +  LN+ +E +L    ++  Q    T+ N+K
Sbjct: 167 RKGIIMEKKFSMGDTITGEKFNSENLSTSLPILNVEKEIQLAFDAIDTFQDNSLTQ-NLK 225

Query: 218 KAMIDMGIERAKTYGWPNTY 237
           K    +G+ERA+ YGW +TY
Sbjct: 226 K----LGLERAEKYGWHDTY 241