Jatropha Genome Database

JcCB0309841.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0309841.10 - phase: 0 /partial
         (228 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29904.m002980 Chalcone synthase, putative                             318   2e-87
29648.m001959 Chalcone synthase, putative                             315   1e-86
30131.m006959 Chalcone synthase, putative                             245   1e-65
29711.m000332 Chalcone synthase, putative                             177   3e-45
30174.m008794 pentatricopeptide repeat-containing protein, putative   152   1e-37
29908.m006145 naringenin-chalcone synthase, putative                   62   2e-10

>29904.m002980 Chalcone synthase, putative
          Length = 390

 Score =  318 bits (814), Expect = 2e-87,   Method: Compositional matrix adjust.
 Identities = 147/225 (65%), Positives = 180/225 (80%)

Query: 1   MESIFESRGATGLATVLAIGTANPPNCIYQADYPHFYFKITRSEHMKELKEKFIRICQKS 60
           ++ +  ++ A G ATVLAIGT  P N + Q+ YP +YF++T SEH  ELKEKF R+C KS
Sbjct: 4   VQDVRRTQRAEGPATVLAIGTVTPTNSVDQSTYPDYYFRVTNSEHKTELKEKFKRMCDKS 63

Query: 61  EIKKRYMYLTEDIIQKNSSIATYKAPSLDARQKILVHEVPKLGEEAATKAIQEWGQPISK 120
            IKKRYM+LTE+++++N +I  Y APSLDARQ I+V EVPKLG+EAA KAI+EWGQP SK
Sbjct: 64  MIKKRYMHLTEEMLKENPNICAYMAPSLDARQDIVVVEVPKLGKEAAVKAIKEWGQPKSK 123

Query: 121 ITHLIFCTASGVNMPGADLELVKLLGLQNSVKRFMMYQQGCFAGAAALRLAKDIAENNFD 180
           ITHL+FCT SGV+MPGAD +L KLLGL+ S+KR MMYQQGCFAG   LRLAKD+AENN  
Sbjct: 124 ITHLVFCTTSGVDMPGADYQLTKLLGLRPSIKRLMMYQQGCFAGGTVLRLAKDLAENNKG 183

Query: 181 SRILIVCSENMTVSFHAPSDTHLDILVGSAIFGDGAAAIIVGSTP 225
           +R+L+VCSE   V+F  PSDTHLD LVG A+FGDGAAA+IVGS P
Sbjct: 184 ARVLVVCSELTAVTFRGPSDTHLDSLVGQALFGDGAAAVIVGSDP 228


>29648.m001959 Chalcone synthase, putative
          Length = 369

 Score =  315 bits (807), Expect = 1e-86,   Method: Compositional matrix adjust.
 Identities = 151/213 (70%), Positives = 173/213 (81%), Gaps = 9/213 (4%)

Query: 13  LATVLAIGTANPPNCIYQADYPHFYFKITRSEHMKELKEKFIRICQKSEIKKRYMYLTED 72
           +A +LAIGTANPPN I+QADYP FYFKI+ SEHM ELK KF  ICQKS IKKRYM+LT D
Sbjct: 4   IAKILAIGTANPPNYIFQADYPDFYFKISNSEHMTELKNKFRNICQKSTIKKRYMHLTGD 63

Query: 73  IIQKNSSIATYKAPSLDARQKILVHEVPKLGEEAATKAIQEWGQPISKITHLIFCTASGV 132
            I+KN +I  Y+  SL         EVPKLG+EAA KAI+EWGQ IS+ITHLIFCT+SG+
Sbjct: 64  TIKKNPNIGIYRTASL---------EVPKLGQEAALKAIKEWGQSISRITHLIFCTSSGI 114

Query: 133 NMPGADLELVKLLGLQNSVKRFMMYQQGCFAGAAALRLAKDIAENNFDSRILIVCSENMT 192
           +MPGAD EL KLLGL  SV+R ++YQ GCFAGA +LRLAKDIAENN +SRILIVCSE+MT
Sbjct: 115 SMPGADFELTKLLGLPPSVQRSIIYQSGCFAGAQSLRLAKDIAENNVESRILIVCSESMT 174

Query: 193 VSFHAPSDTHLDILVGSAIFGDGAAAIIVGSTP 225
             FH PSD HLDILVGSAIFGDGAAA+IVG+ P
Sbjct: 175 TCFHVPSDAHLDILVGSAIFGDGAAALIVGANP 207


>30131.m006959 Chalcone synthase, putative
          Length = 331

 Score =  245 bits (626), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 113/167 (67%), Positives = 136/167 (81%)

Query: 62  IKKRYMYLTEDIIQKNSSIATYKAPSLDARQKILVHEVPKLGEEAATKAIQEWGQPISKI 121
           IKKRYM++ E+I+++N ++  Y  PSLDARQ I+V EVPKLG+EAA KAI+EWGQP SKI
Sbjct: 2   IKKRYMHVNEEILKENPNMCAYWEPSLDARQDIVVVEVPKLGKEAAAKAIKEWGQPKSKI 61

Query: 122 THLIFCTASGVNMPGADLELVKLLGLQNSVKRFMMYQQGCFAGAAALRLAKDIAENNFDS 181
           THLIFCT SGV+MPG D +L KLLGL+ SVKRFMMYQQGC+AG   +RLAKD+AENN  +
Sbjct: 62  THLIFCTTSGVDMPGCDYQLTKLLGLRPSVKRFMMYQQGCYAGGTVIRLAKDLAENNKGA 121

Query: 182 RILIVCSENMTVSFHAPSDTHLDILVGSAIFGDGAAAIIVGSTPSTS 228
           R+L+VCSE   V+F  PSD HLD LVG A+FGDGA A+IVGS P TS
Sbjct: 122 RVLVVCSEITAVTFRGPSDKHLDSLVGQALFGDGAGALIVGSDPDTS 168


>29711.m000332 Chalcone synthase, putative
          Length = 387

 Score =  177 bits (449), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 90/214 (42%), Positives = 128/214 (59%), Gaps = 1/214 (0%)

Query: 12  GLATVLAIGTANPPNCIYQADYPHFYFKITRSEHMKELKEKFIRICQKSEIKKRYMYLTE 71
           G AT+LA+G A P   + Q      YFK T  +   ELK+K  R+C+ + +K RY+ ++E
Sbjct: 14  GKATILALGKAFPHQLVMQEFLVDGYFKNTNCDD-PELKQKLTRLCKTTTVKTRYVVMSE 72

Query: 72  DIIQKNSSIATYKAPSLDARQKILVHEVPKLGEEAATKAIQEWGQPISKITHLIFCTASG 131
           +I++K   +A    P+L  R  I    V K+  EA+ K I+ WG+PIS ITHL++ ++S 
Sbjct: 73  EILEKYPELAVEGLPTLKQRLDICNEAVTKMAIEASQKCIKNWGRPISDITHLVYVSSSE 132

Query: 132 VNMPGADLELVKLLGLQNSVKRFMMYQQGCFAGAAALRLAKDIAENNFDSRILIVCSENM 191
             +PG DL L + LGL    +R  +Y  GC  G + LR+AKDIAENN  SR+L+  SE  
Sbjct: 133 ARLPGGDLHLARGLGLSPETQRVTLYFMGCSGGVSGLRIAKDIAENNPGSRVLLATSETT 192

Query: 192 TVSFHAPSDTHLDILVGSAIFGDGAAAIIVGSTP 225
            + F  PS      LVG A+FGDGA A+I+G+ P
Sbjct: 193 IIGFKPPSADRPYDLVGVALFGDGAGAMIIGTDP 226


>30174.m008794 pentatricopeptide repeat-containing protein, putative
          Length = 1163

 Score =  152 bits (384), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 81/210 (38%), Positives = 123/210 (58%), Gaps = 2/210 (0%)

Query: 4   IFESRGAT-GLATVLAIGTANPPNCIYQADYPHFYFKITRSEHMKELKEKFIRICQKSEI 62
           I   R  T G ATVLA+G A P   I Q      Y + T+ E +  +KEK  R+C+ + +
Sbjct: 789 ILTRRAPTPGKATVLAVGKAFPSQLIPQDCLVEGYIRDTKCEDV-SIKEKLERLCKTTTV 847

Query: 63  KKRYMYLTEDIIQKNSSIATYKAPSLDARQKILVHEVPKLGEEAATKAIQEWGQPISKIT 122
           K RY  ++++I++K   IA   + ++  R  I    V ++ +EA+   I+EWG+P+  IT
Sbjct: 848 KTRYTVMSKEILEKYPEIAIEGSTTIKQRLDIANPAVVEMAKEASLACIKEWGRPVEDIT 907

Query: 123 HLIFCTASGVNMPGADLELVKLLGLQNSVKRFMMYQQGCFAGAAALRLAKDIAENNFDSR 182
           H+++ ++S + +PG DL L   LGL+N V R M+Y  GC+ G   LR+AKDIAENN  SR
Sbjct: 908 HIVYVSSSEIRLPGGDLYLASQLGLRNDVCRVMLYFLGCYGGVTGLRVAKDIAENNPGSR 967

Query: 183 ILIVCSENMTVSFHAPSDTHLDILVGSAIF 212
           +L+  SE   + F  P+      LVG+A+F
Sbjct: 968 VLLTTSETTILGFRPPNKARPYDLVGAALF 997


>29908.m006145 naringenin-chalcone synthase, putative
          Length = 396

 Score = 62.0 bits (149), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 34/80 (42%), Positives = 48/80 (60%)

Query: 146 GLQNSVKRFMMYQQGCFAGAAALRLAKDIAENNFDSRILIVCSENMTVSFHAPSDTHLDI 205
           GL++ V R+M+           L ++  I++    +   ++ +      FHAPSDTHLDI
Sbjct: 188 GLKSFVGRWMVVMLAGLLLGQQLFVSLKISQKTIFTLAFLLFALRTKQCFHAPSDTHLDI 247

Query: 206 LVGSAIFGDGAAAIIVGSTP 225
           LVGSAIF DGAAA+IVG+ P
Sbjct: 248 LVGSAIFADGAAAVIVGAYP 267