Jatropha Genome Database

JcCB0305141.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0305141.10 - phase: 0 /partial
         (50 letters)

Database: castor_wgs_0.1_aa 
           31,221 sequences; 10,419,776 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

30143.m001221 conserved hypothetical protein                           90   2e-19
29751.m001847 glycosyltransferase, putative                            64   1e-11

>30143.m001221 conserved hypothetical protein
          Length = 206

 Score = 90.1 bits (222), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 45/52 (86%), Positives = 47/52 (90%), Gaps = 2/52 (3%)

Query: 1  MTTSIHITALDGIINVNSLFTLAVFLGLAWNPSDPNNSLITDPT--CAASSS 50
          MTTSIHITALDGI+NVNSLFTLAVFLGL WNPSDPN+S ITDPT  CAAS S
Sbjct: 1  MTTSIHITALDGIVNVNSLFTLAVFLGLTWNPSDPNSSFITDPTSPCAASRS 52


>29751.m001847 glycosyltransferase, putative
          Length = 563

 Score = 64.3 bits (155), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 29/43 (67%), Positives = 36/43 (83%), Gaps = 1/43 (2%)

Query: 9  ALDGIINVNSLFTLAVFLGLAWNP-SDPNNSLITDPTCAASSS 50
          ALDGI+NVNSLFT A+FLGLAW P + P  +LI +P+CAASS+
Sbjct: 2  ALDGIVNVNSLFTFALFLGLAWYPAAGPATTLIAEPSCAASSA 44